NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912861
Clone id YMU001_000023_F11
Library
Length 321
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000023_F11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GAGAGAGAGAGAGAGAGGGGACCTGTTACCGTTGTTTATCTTGACATCTATACAACAAGA
CATGTTATATATAGAACACCCTCTCAAGTCTAACATCTACAACACTGCTTTTCCCTTTGC
TCTTTTTCATTACCTCATCTTTGCTTTCTCCAGCAAGAAGCCTATTTAAATATCCAAGTT
CCGGTAGGGGTCTCGAATTCTTCCAGGTTGCCTCTACCCAATCTCTTAGTTTTTGGACTT
CGCTACGCCGATATTGAGCTGGCGCTAGAGCCACACCTAACCGAGCTCTAGTTAGAGCCA
CAATCTCTGCTAGGCGCCAAC
■■Homology search results ■■ -
sp_hit_id Q5QD09
Definition sp|Q5QD09|TAA7E_MOUSE Trace amine-associated receptor 7e OS=Mus musculus
Align length 32
Score (bit) 29.3
E-value 6.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912861|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_F11.
         (321 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5QD09|TAA7E_MOUSE Trace amine-associated receptor 7e OS=Mus ...    29   6.3  
sp|Q923Y1|TAA7G_RAT Trace amine-associated receptor 7g OS=Rattus...    29   8.2  

>sp|Q5QD09|TAA7E_MOUSE Trace amine-associated receptor 7e OS=Mus
           musculus GN=Taar7e PE=2 SV=1
          Length = 358

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +1

Query: 97  LQHCF--SLCSFSLPHLCFLQQEAYLNIQVPV 186
           L  CF  S CS S+ HLCF+  + Y+ +  P+
Sbjct: 122 LHTCFDVSFCSSSIFHLCFISVDRYIAVSDPL 153


>sp|Q923Y1|TAA7G_RAT Trace amine-associated receptor 7g OS=Rattus
           norvegicus GN=Taar7g PE=3 SV=1
          Length = 358

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +1

Query: 97  LQHCF--SLCSFSLPHLCFLQQEAYLNIQVPV 186
           L  CF  S CS SL HLCF+  + ++ +  P+
Sbjct: 122 LHSCFDISFCSSSLLHLCFISVDRHIAVSDPL 153
tr_hit_id Q9LZL9
Definition tr|Q9LZL9|Q9LZL9_ARATH Putative uncharacterized protein T7H20_180 OS=Arabidopsis thaliana
Align length 39
Score (bit) 37.7
E-value 0.29
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912861|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_F11.
         (321 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9LZL9|Q9LZL9_ARATH Putative uncharacterized protein T7H20_18...    38   0.29 
tr|Q8LFK4|Q8LFK4_ARATH Putative uncharacterized protein OS=Arabi...    38   0.29 
tr|Q65XG4|Q65XG4_ORYSJ Os05g0457700 protein OS=Oryza sativa subs...    35   1.4  
tr|A3B4R7|A3B4R7_ORYSJ Putative uncharacterized protein OS=Oryza...    35   1.4  
tr|B8AZ32|B8AZ32_ORYSI Putative uncharacterized protein OS=Oryza...    34   3.2  
tr|A9SNQ4|A9SNQ4_PHYPA Predicted protein OS=Physcomitrella paten...    34   3.2  
tr|A7PNQ9|A7PNQ9_VITVI Chromosome chr8 scaffold_23, whole genome...    34   4.1  
tr|A5BWH7|A5BWH7_VITVI Putative uncharacterized protein OS=Vitis...    34   4.1  
tr|B1KEM8|B1KEM8_SHEWM Putative uncharacterized protein OS=Shewa...    33   5.4  
tr|A9P842|A9P842_POPTR Putative uncharacterized protein OS=Popul...    33   7.1  
tr|Q1DDS9|Q1DDS9_MYXXD Serine/threonine kinase family protein OS...    33   9.2  
tr|Q9KJN7|Q9KJN7_MYXXA Putative serine/threonine protein kinase ...    33   9.2  

>tr|Q9LZL9|Q9LZL9_ARATH Putative uncharacterized protein T7H20_180
           OS=Arabidopsis thaliana GN=T7H20_180 PE=2 SV=1
          Length = 420

 Score = 37.7 bits (86), Expect = 0.29
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = -3

Query: 307 EIVALTRARLGVALAPAQYRRSEVQKLRDWVEATWKNSR 191
           E++AL RA     L   + R+SE +K++ W E+ W+N R
Sbjct: 355 EVIALARAGYAELLLIQENRKSEGEKMKSWAESAWRNKR 393


>tr|Q8LFK4|Q8LFK4_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 420

 Score = 37.7 bits (86), Expect = 0.29
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = -3

Query: 307 EIVALTRARLGVALAPAQYRRSEVQKLRDWVEATWKNSR 191
           E++AL RA     L   + R+SE +K++ W E+ W+N R
Sbjct: 355 EVIALARAGYAELLLIQENRKSEGEKMKSWAESAWRNKR 393


>tr|Q65XG4|Q65XG4_ORYSJ Os05g0457700 protein OS=Oryza sativa subsp.
           japonica GN=OJ1362_D02.3 PE=4 SV=1
          Length = 416

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = -3

Query: 319 WRLAEIVALTRARLGVALAPAQYRRSEVQKLRDWVEATWKNSR 191
           WR  +I++L R      L     RR+E +++++W E  W+NSR
Sbjct: 350 WR--DIISLARGEYAELLLIQSNRRAEGERMKEWAEHAWRNSR 390


>tr|A3B4R7|A3B4R7_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_018039 PE=4 SV=1
          Length = 392

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = -3

Query: 319 WRLAEIVALTRARLGVALAPAQYRRSEVQKLRDWVEATWKNSR 191
           WR  +I++L R      L     RR+E +++++W E  W+NSR
Sbjct: 326 WR--DIISLARGEYAELLLIQSNRRAEGERMKEWAEHAWRNSR 366


>tr|B8AZ32|B8AZ32_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_20207 PE=4 SV=1
          Length = 416

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -3

Query: 319 WRLAEIVALTRARLGVALAPAQYRRSEVQKLRDWVEATWKNSR 191
           WR  +I++L R      L     R++E +++++W E  W+NSR
Sbjct: 350 WR--DIISLARGEYAELLLIQSNRKAEGERMKEWAEHAWRNSR 390


>tr|A9SNQ4|A9SNQ4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_81773 PE=4 SV=1
          Length = 624

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -3

Query: 313 LAEIVALTRARLGVALAPAQYRRSEVQKLRDWVEATWKNSRPLPEL 176
           L +++ L+RAR    +     R  E  K++ W    WK  RPL +L
Sbjct: 441 LVDVMCLSRARYAEIIHKFPNRDEEADKIQKWASKMWKGPRPLLDL 486


>tr|A7PNQ9|A7PNQ9_VITVI Chromosome chr8 scaffold_23, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00021355001
           PE=4 SV=1
          Length = 431

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 307 EIVALTRARLGVALAPAQYRRSEVQKLRDWVEATWKNSR 191
           +IVAL R      L   Q R+ E ++++ W +  W+N R
Sbjct: 366 DIVALARGAYAEVLCVQQNRKDEGERMKSWAQTAWRNRR 404


>tr|A5BWH7|A5BWH7_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_003114 PE=4 SV=1
          Length = 595

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 307 EIVALTRARLGVALAPAQYRRSEVQKLRDWVEATWKNSR 191
           +IVAL R      L   Q R+ E ++++ W +  W+N R
Sbjct: 325 DIVALARGAYAEVLCVQQNRKDEGERMKSWAQTAWRNRR 363


>tr|B1KEM8|B1KEM8_SHEWM Putative uncharacterized protein
           OS=Shewanella woodyi (strain ATCC 51908 / MS32)
           GN=Swoo_3784 PE=4 SV=1
          Length = 1224

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
 Frame = -3

Query: 307 EIVALTRA--RLGVALAPAQYRRSEVQKLRDWVEATWKNSRP 188
           +IVAL +    L  +++ A+ RRSEV +  DW + TW N +P
Sbjct: 774 KIVALKQEIRDLETSISKAEQRRSEVLRYDDWYQHTWLNRKP 815


>tr|A9P842|A9P842_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 380

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -3

Query: 307 EIVALTRARLGVALAPAQYRRSEVQKLRDWVEATWKN 197
           +I+AL R      L   + R+ E +K++ W EA W+N
Sbjct: 315 DIIALARGGYAETLCIQENRKGEGEKMKRWAEAAWRN 351