BP912872
Clone id YMU001_000023_G11
Library
Length 601
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000023_G11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CATTGAGAAGCCCAGGCCCCGTCGTTTTCGTCCTAGCCAACTATCCAGCACTCAGCTCAT
CACATTCCGTCCATCATCATCAGACTCATCTGCTGCATACCTCGATGCATCTGCTTTATT
TGATTCTGACACAAAGCCTCGCCATCACATCACATCAGCCTTGTTAAGACTTGCTTACAT
CTGCATCACCAATCTCGCTAGTGCAGTCCTGCCCAACCCGTGTTGTAGAAGGAATCATTA
CGAGGGCTTCAACACCTACAACCTTGCTTCATCTACGGCTTGTCTTCTCTTTCCCTAGTC
AACCGCATGCTCGCTCTGCAGAATTTTTCAAGCGACCTGCAACGTTTTTGTTTTAATGCT
TTCTTGTCATATCTTAATATCATGCATCGAAGCCCCAGTTTCCACTAAAACTCTCCACCA
AGTGGCTACCCTTTTGGCATTGTACTGCATCGTGCTTCCCAATCTGTTTGAGGCTTGCTT
GAGCTGCTTGCTACTGTAATAATTTCCCATGCCTTTCTTGGTCGGCTCCACCAAATGAAT
CTTCGCACGAGGTAACACTACCAAGCACTTGTATCAAGCCCTTATTAAGGGACTCATCTC
A
■■Homology search results ■■ -
sp_hit_id Q5UQK5
Definition sp|Q5UQK5|YR403_MIMIV Uncharacterized protein R403 OS=Acanthamoeba polyphaga mimivirus
Align length 37
Score (bit) 32.7
E-value 1.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912872|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_G11.
(601 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5UQK5|YR403_MIMIV Uncharacterized protein R403 OS=Acanthamoe... 33 1.5
sp|Q5YGP8|PLET1_ARATH AP2-like ethylene-responsive transcription... 32 3.2
sp|Q95XZ5|NPBL_CAEEL Nipped-B-like protein pqn-85 OS=Caenorhabdi... 32 3.2
sp|O44757|LIN59_CAEEL Probable histone-lysine N-methyltransferas... 30 7.1
sp|Q01031|GL_SHV21 Glycoprotein L OS=Saimiriine herpesvirus 2 (s... 30 9.4

>sp|Q5UQK5|YR403_MIMIV Uncharacterized protein R403 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_R403 PE=1 SV=1
Length = 754

Score = 32.7 bits (73), Expect = 1.5
Identities = 13/37 (35%), Positives = 26/37 (70%), Gaps = 3/37 (8%)
Frame = +1

Query: 355 NAFLSYLNIMHRSPSFH---*NSPPSGYPFGIVLHRA 456
N+ LSY+ +M +P+F+ N+P G P+G++++R+
Sbjct: 251 NSLLSYIKLMELNPNFYSTITNNPYKGLPYGLLIYRS 287


>sp|Q5YGP8|PLET1_ARATH AP2-like ethylene-responsive transcription
factor PLT1 OS=Arabidopsis thaliana GN=PLT1 PE=2 SV=1
Length = 574

Score = 31.6 bits (70), Expect = 3.2
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1

Query: 130 HKASPSHHISLVKTCLHLHHQSR*CSPAQPVL*KESL-RGLQHLQPCFIYGLSSLSLVN 303
H +S +H S ++T LHLH Q+ Q + L H P ++GL S S+V+
Sbjct: 439 HDSSSFNHHSYIQTQLHLHQQTNNYLQQQSSQNSQQLYNAYLHSNPALLHGLVSTSIVD 497


>sp|Q95XZ5|NPBL_CAEEL Nipped-B-like protein pqn-85 OS=Caenorhabditis
elegans GN=pqn-85 PE=2 SV=2
Length = 2203

Score = 31.6 bits (70), Expect = 3.2
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +1

Query: 256 LQPCFIYGLSSLSLVNRMLALQNFSSDLQRFCFNAFLSYLNIMHRSPSFH*NSPPSGY 429
L P F+ + SL + +LA FS F+ L+ +HR+P F + +GY
Sbjct: 934 LTPFFVANVGSLQITAMLLASNIFSRAEDSLRFSMITDLLSSLHRAPQFTQKNSNNGY 991


>sp|O44757|LIN59_CAEEL Probable histone-lysine N-methyltransferase
lin-59 OS=Caenorhabditis elegans GN=lin-59 PE=2 SV=1
Length = 1312

Score = 30.4 bits (67), Expect = 7.1
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3

Query: 495 CNNFPCLSWSAPPNESSHEV-TLPSTCIKP 581
C + PC S PPN S+ + T+PS+C P
Sbjct: 228 CYDVPCTSEGPPPNNSNPAITTIPSSCSTP 257


>sp|Q01031|GL_SHV21 Glycoprotein L OS=Saimiriine herpesvirus 2
(strain 11) GN=GL PE=3 SV=1
Length = 141

Score = 30.0 bits (66), Expect = 9.4
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +2

Query: 179 ICITNLASAVLPNPCC 226
+C+ N+ +A++PNPCC
Sbjct: 11 LCLANILNALIPNPCC 26


tr_hit_id Q01BZ7
Definition tr|Q01BZ7|Q01BZ7_OSTTA Chromosome 03 contig 1, DNA sequence OS=Ostreococcus tauri
Align length 40
Score (bit) 34.3
E-value 5.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912872|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_G11.
(601 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q01BZ7|Q01BZ7_OSTTA Chromosome 03 contig 1, DNA sequence OS=O... 34 5.6
tr|A8MID6|A8MID6_ALKOO Putative uncharacterized protein OS=Alkal... 34 5.7

>tr|Q01BZ7|Q01BZ7_OSTTA Chromosome 03 contig 1, DNA sequence
OS=Ostreococcus tauri GN=Ot03g05080 PE=4 SV=1
Length = 206

Score = 34.3 bits (77), Expect = 5.6
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3

Query: 432 FWHCTASCFPICLRLA*AACYCNNFPCLSWSAPPNESSHE 551
+W C SC P L A +CN P SW P+ + E
Sbjct: 13 YWSCAFSCMPRALASFFRALFCNGSPSASWVGTPSSPNLE 52


>tr|A8MID6|A8MID6_ALKOO Putative uncharacterized protein
OS=Alkaliphilus oremlandii (strain OhILAs) GN=Clos_2031
PE=4 SV=1
Length = 611

Score = 34.3 bits (77), Expect = 5.7
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2

Query: 197 ASAVLPNPCCRRNHYEGFNTYNLASSTACLLFP*STACSLCRIF 328
AS +P C ++H +G N+ NLA+ +C L P T+C + +F
Sbjct: 543 ASWCSSDPLCIQSHGQGLNSLNLAACHSCALLP-ETSCEMRNLF 585