BP912876
Clone id YMU001_000023_H03
Library
Length 560
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000023_H03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AAAACGCAATATCTGCCACAACCAGGNTCCAGCCTTACACACACCATCCACACAGAGGCC
TCTTGAGGTCGCCCATCTCTCTCTCTCTCTCTCTCTCACGCGCGCGCGCGCGCGCGCCCG
CTCGAGCCTGCTTGATGAATGAGGCCATGAAATTTCTTTCTTGCAACTGTTTAAGCAAGA
ACAAGGAGCGATGTGGGTGAACAAACGTGCAAAGCTGAAGAATTAGCAGGCCTCCTGCCA
AACACCTGCATAGTTAGCAGCATGAATGGTTTGGGCAGCAAAGAAATTATACCCCTCACT
GTCAGTGACCATGCCATGGAGCCTATGCAGCAGTCGCCACTGTCAGATATTCACCTCTGC
GCAATCGATCCCTTCGGTGATGACATCTATGACATGGACTTGATCACTTCCTACTTTGAC
ATTGATAACCAAGACCTTCTTCTATCTTGCAGTAGTGGCATGCCCTCCATCTCTACTCCC
ATCATTAACTCTAATGTCCTGTGCAATCAAGAGAATAATGGGTCCCAGCTTGATGATGAT
GAGCTTCCTCATGCAGACGA
■■Homology search results ■■ -
sp_hit_id Q5T4T6
Definition sp|Q5T4T6|SYC2L_HUMAN Synaptonemal complex protein 2-like OS=Homo sapiens
Align length 87
Score (bit) 31.2
E-value 3.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912876|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_H03.
(560 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5T4T6|SYC2L_HUMAN Synaptonemal complex protein 2-like OS=Hom... 31 3.6
sp|Q6S003|KIF8_DICDI Kinesin-related protein 8 OS=Dictyostelium ... 30 6.2

>sp|Q5T4T6|SYC2L_HUMAN Synaptonemal complex protein 2-like OS=Homo
sapiens GN=SYCP2L PE=1 SV=2
Length = 812

Score = 31.2 bits (69), Expect = 3.6
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +1

Query: 187 SDVGEQTCKAEELAGLLPNTCIVSSMNGLGSKEIIPLTVSDHAMEPMQQSPLSDIHLCAI 366
S + +T +AEE +T +V M+ + +I L ++D + P+ P SD HL +
Sbjct: 431 SGLERETEQAEE------STNMVEFMSAEDDRCLITLHLNDQSEPPVIGEPASDSHLQPV 484

Query: 367 DPFGDDIYDMDLITSY----FDIDNQD 435
PFG + + Y F NQD
Sbjct: 485 PPFGVPDFPQQPKSHYRKHLFSESNQD 511


>sp|Q6S003|KIF8_DICDI Kinesin-related protein 8 OS=Dictyostelium
discoideum GN=kif8 PE=2 SV=1
Length = 1873

Score = 30.4 bits (67), Expect = 6.2
Identities = 19/74 (25%), Positives = 33/74 (44%)
Frame = +1

Query: 328 QQSPLSDIHLCAIDPFGDDIYDMDLITSYFDIDNQDLLLSCSSGMPSISTPIINSNVLCN 507
Q +S + P D Y +L + + NQ + + M ++ST I +SNV+ N
Sbjct: 618 QLEEISQNFINNFSPNKDQTYFNELFEQFNSVLNQPTISPITPMMAAVSTQISSSNVIIN 677

Query: 508 QENNGSQLDDDELP 549
+ +D+ LP
Sbjct: 678 SNSLLPMAEDNLLP 691


tr_hit_id Q8YME5
Definition tr|Q8YME5|Q8YME5_ANASP All4989 protein OS=Anabaena sp. (strain PCC 7120)
Align length 53
Score (bit) 35.0
E-value 2.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912876|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_H03.
(560 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q8YME5|Q8YME5_ANASP All4989 protein OS=Anabaena sp. (strain P... 35 2.8
tr|Q3MAT9|Q3MAT9_ANAVT Glycoside hydrolase family 65, central ca... 35 2.8
tr|Q54IY4|Q54IY4_DICDI Putative uncharacterized protein OS=Dicty... 34 6.2
tr|A6ESF2|A6ESF2_9BACT Aminotransferase OS=unidentified eubacter... 33 8.1
tr|Q7PF94|Q7PF94_ANOGA AGAP007563-PB OS=Anopheles gambiae GN=AGA... 33 8.1
tr|A7UR99|A7UR99_ANOGA AGAP007563-PA OS=Anopheles gambiae GN=AGA... 33 8.1

>tr|Q8YME5|Q8YME5_ANASP All4989 protein OS=Anabaena sp. (strain PCC
7120) GN=all4989 PE=4 SV=1
Length = 759

Score = 35.0 bits (79), Expect = 2.8
Identities = 20/53 (37%), Positives = 25/53 (47%)
Frame = -3

Query: 327 HRLHGMVTDSEGYNFFAAQTIHAANYAGVWQEAC*FFSFARLFTHIAPCSCLN 169
H L + D E AA+ IHAA+ GVWQ F R+ T P +C N
Sbjct: 657 HFLRAALVDLEDVRLNAAEGIHAASAGGVWQAVVLGFGGVRM-TQFGPMACPN 708


>tr|Q3MAT9|Q3MAT9_ANAVT Glycoside hydrolase family 65, central
catalytic OS=Anabaena variabilis (strain ATCC 29413 /
PCC 7937) GN=Ava_2279 PE=4 SV=1
Length = 759

Score = 35.0 bits (79), Expect = 2.8
Identities = 20/53 (37%), Positives = 25/53 (47%)
Frame = -3

Query: 327 HRLHGMVTDSEGYNFFAAQTIHAANYAGVWQEAC*FFSFARLFTHIAPCSCLN 169
H L + D E AA+ IHAA+ GVWQ F R+ T P +C N
Sbjct: 657 HFLRAALVDLEDVRLNAAEGIHAASAGGVWQAVVLGFGGVRM-TQFGPMACPN 708


>tr|Q54IY4|Q54IY4_DICDI Putative uncharacterized protein
OS=Dictyostelium discoideum GN=DDB_0219336 PE=4 SV=1
Length = 970

Score = 33.9 bits (76), Expect = 6.2
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +1

Query: 340 LSDIHLCAIDPFGDDIYDMDLITSYFDIDNQDLLLSCSSGMPSISTPIINSNVLCNQENN 519
L D+ C + + YD I S + +N ++L S +S + S S+ IINSN N NN
Sbjct: 557 LDDLQSCYFSAYNESDYDSPTIISETNHNNNNILKSPNS-VNSSSSSIINSNSNSNNNNN 615


>tr|A6ESF2|A6ESF2_9BACT Aminotransferase OS=unidentified eubacterium
SCB49 GN=SCB49_00240 PE=3 SV=1
Length = 501

Score = 33.5 bits (75), Expect = 8.1
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1

Query: 397 DLITSYFDIDNQDLLLSCSSGMPSISTPIINSNVLCNQENNGSQLDDDEL 546
D+I ++ D D+LL+C SGM + L EN SQLD D+L
Sbjct: 93 DIIKTHVGADEHDVLLTCGSGMTGVINKFQRILGLKAPENLQSQLDLDKL 142


>tr|Q7PF94|Q7PF94_ANOGA AGAP007563-PB OS=Anopheles gambiae
GN=AGAP007563 PE=4 SV=4
Length = 7484

Score = 33.5 bits (75), Expect = 8.1
Identities = 16/56 (28%), Positives = 33/56 (58%)
Frame = +1

Query: 181 TRSDVGEQTCKAEELAGLLPNTCIVSSMNGLGSKEIIPLTVSDHAMEPMQQSPLSD 348
TR D G TC+AE +AG + +T V +++ + ++E+ +S +E ++ + + D
Sbjct: 6837 TRRDTGAYTCRAENVAGSVTSTATVQTLDTIETEEVTEY-ISPRFLETIKPTRVMD 6891


>tr|A7UR99|A7UR99_ANOGA AGAP007563-PA OS=Anopheles gambiae
GN=AGAP007563 PE=4 SV=1
Length = 15844

Score = 33.5 bits (75), Expect = 8.1
Identities = 16/56 (28%), Positives = 33/56 (58%)
Frame = +1

Query: 181 TRSDVGEQTCKAEELAGLLPNTCIVSSMNGLGSKEIIPLTVSDHAMEPMQQSPLSD 348
TR D G TC+AE +AG + +T V +++ + ++E+ +S +E ++ + + D
Sbjct: 6837 TRRDTGAYTCRAENVAGSVTSTATVQTLDTIETEEVTEY-ISPRFLETIKPTRVMD 6891