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NBDC - LSDB Archive
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BP912884
Clone id YMU001_000023_H11
Library
Length 535
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000023_H11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTATATATCATTTTGTGATTCGGGCGTCATGGCCGTGCCTTGCCCTTCACCATGTACTGG
CATTGTCTCTCTGCATACTGCTGATTCCTTTCACAAGTCTTACATTACGTTCTCTTTCTC
AGCCGTGTGTTTGTTCAGTCCTGATTGAATTTCCTACTCATGTCGGCGTACATTGGAATT
TAGCAACCTCCCATTGAGCCCGTACTTGATCTTGTATCTCCCCTTTTAATGTGACACATA
TTTCATCCCACAACATTTCATACATTGCACTGTTTTGGCATAGAATCTCTCCATCTATTC
CAATTCAAGCTCTTGTCGCATAATACGCATTTATGTCCTTATTCACATCTTTATGTCTTT
GCAGAGGACTTCATCTTGTCGAGCTATCTTTTCAATCCGTCAAGAACCTGGGAACACAGT
CCCGTCCCTCATTCTTGGATGACACACATTGGATGCTTTTGGGGGAGTAAGAAAGGTAGC
TTCGTCCTTGCGTCCTCCCTCCGCAAATCCAGACATGTCTCTCCCTGCCGCTACA
■■Homology search results ■■ -
sp_hit_id P83119
Definition sp|P83119|MTH12_DROME Probable G-protein coupled receptor Mth-like 12 OS=Drosophila melanogaster
Align length 78
Score (bit) 32.3
E-value 1.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912884|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_H11.
         (515 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P83119|MTH12_DROME Probable G-protein coupled receptor Mth-li...    32   1.3  
sp|A9WSU4|RS8_RENSM 30S ribosomal protein S8 OS=Renibacterium sa...    30   6.7  
sp|Q4MTG0|ODPA_BACCE Pyruvate dehydrogenase E1 component subunit...    30   6.7  
sp|Q88YK2|LGT_LACPL Prolipoprotein diacylglyceryl transferase OS...    30   6.7  
sp|Q9UWW6|VATA_SULSO V-type ATP synthase alpha chain OS=Sulfolob...    30   8.7  
sp|A8AC29|VATA_IGNH4 V-type ATP synthase alpha chain OS=Ignicocc...    30   8.7  
sp|Q9NPC1|LT4R2_HUMAN Leukotriene B4 receptor 2 OS=Homo sapiens ...    30   8.7  
sp|Q5FL71|LGT_LACAC Prolipoprotein diacylglyceryl transferase OS...    30   8.7  
sp|Q9Y2D8|ADIP_HUMAN Afadin- and alpha-actinin-binding protein O...    30   8.7  

>sp|P83119|MTH12_DROME Probable G-protein coupled receptor Mth-like
           12 OS=Drosophila melanogaster GN=mthl12 PE=2 SV=2
          Length = 488

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 20/78 (25%), Positives = 35/78 (44%)
 Frame = +2

Query: 221 FHPTTFHTLHCFGIESLHLFQFKLLSHNTHLCPYSHLYVFAEDFILSSYLFNPSRTWEHS 400
           F   +FH    F   + H  Q++ L +NT        +V+    I +  +F+ ++ WE+ 
Sbjct: 293 FSVVSFHLWELFTSLNRHEPQYRFLIYNT--------FVWCTAAIPTVVIFSMNQMWEND 344

Query: 401 PVPHSWMTHIGCFWGSKK 454
           P    W+  +G F  S K
Sbjct: 345 PGKSEWLPLVGYFGCSVK 362


>sp|A9WSU4|RS8_RENSM 30S ribosomal protein S8 OS=Renibacterium
           salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589)
           GN=rpsH PE=3 SV=1
          Length = 132

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = -1

Query: 209 LKGEIQDQVRAQWEVAKFQCTPT*VGNSIRTEQTHG*ERERNVRLVKGIS 60
           LKG + D ++A+  +A ++     VG S+  +   G  RER++  ++ IS
Sbjct: 32  LKGHVADILKAEGYIASWKVEDAEVGKSLTIDLKFGPNRERSIAGIRRIS 81


>sp|Q4MTG0|ODPA_BACCE Pyruvate dehydrogenase E1 component subunit
           alpha OS=Bacillus cereus GN=pdhA PE=1 SV=3
          Length = 371

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +2

Query: 323 SHLYVFAEDFILSSYLFNPSRTWEHSPVPHSWMTHIGCFWGSK 451
           SH  + AEDFIL  Y   P   W   P+  +++   G F G++
Sbjct: 91  SHFALEAEDFILPGYRDVPQLVWHGLPLYQAFLFSRGHFMGNQ 133


>sp|Q88YK2|LGT_LACPL Prolipoprotein diacylglyceryl transferase
           OS=Lactobacillus plantarum GN=lgt PE=3 SV=1
          Length = 282

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +1

Query: 325 TSLCLCRGLHLVELSFQSVKNLGTQSRPSFLDDTHWMLLG 444
           TSL   +GLHL +     +   G   +P+FL ++ W LLG
Sbjct: 151 TSLSFLQGLHLPDWLINQMYIRGAYRQPTFLYESVWDLLG 190


>sp|Q9UWW6|VATA_SULSO V-type ATP synthase alpha chain OS=Sulfolobus
           solfataricus GN=atpA PE=3 SV=1
          Length = 592

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = -3

Query: 414 E*GTGLCSQVLDGLKR*LDKMKSSAKT*RCE*GHKCVLCDKSLNWN 277
           E G GL  ++ DGL+R LD +K   K+     G K    D+   W+
Sbjct: 74  ELGPGLIGKIFDGLQRPLDSIKELTKSPFIARGIKVPSIDRKTKWH 119


>sp|A8AC29|VATA_IGNH4 V-type ATP synthase alpha chain OS=Ignicoccus
           hospitalis (strain KIN4/I / DSM 18386 / JCM 14125)
           GN=atpA PE=3 SV=1
          Length = 596

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = -3

Query: 414 E*GTGLCSQVLDGLKR*LDKMKSSAKT*RCE*GHKCVLCDKSLNWNRWR 268
           E G GL S + DG+ R L+ +   AK+   + G K    D+S  W  WR
Sbjct: 75  ELGPGLLSHIFDGILRPLESIHEVAKSPFIKRGIKVPSLDRSKKW-EWR 122


>sp|Q9NPC1|LT4R2_HUMAN Leukotriene B4 receptor 2 OS=Homo sapiens
           GN=LTB4R2 PE=2 SV=1
          Length = 389

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +1

Query: 13  PCLALHHVLALSLCILLIPFTSLTLRSLSQPCVCSVLIEFPTHVGVHWNLAT 168
           P LA   +LA+ L  LL+   +   R L +  VC +    P H   H +L T
Sbjct: 166 PALARRLLLAVWLAALLLAVPAAVYRHLWRDRVCQLCHPSPVHAAAHLSLET 217


>sp|Q5FL71|LGT_LACAC Prolipoprotein diacylglyceryl transferase
           OS=Lactobacillus acidophilus GN=lgt PE=3 SV=1
          Length = 280

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +1

Query: 325 TSLCLCRGLHLVELSFQSVKNLGTQSRPSFLDDTHWMLLG 444
           T+L   + LHL E   Q +K  GT  +P+FL ++ + L+G
Sbjct: 150 TTLHFLQSLHLPEFVIQQMKIGGTYYQPTFLYESFFNLIG 189


>sp|Q9Y2D8|ADIP_HUMAN Afadin- and alpha-actinin-binding protein
           OS=Homo sapiens GN=SSX2IP PE=1 SV=3
          Length = 614

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -1

Query: 239 EMLWDEICVTLKGEIQDQVRAQWEVAK 159
           E +WD  C T++ ++ + +R QW + K
Sbjct: 324 ESMWDLSCETVREQLTNSIRKQWRILK 350
tr_hit_id B5QKA7
Definition tr|B5QKA7|B5QKA7_LACRH Prolipoprotein diacylglyceryl transferase OS=Lactobacillus rhamnosus HN001
Align length 40
Score (bit) 35.0
E-value 2.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912884|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_H11.
         (515 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B5QKA7|B5QKA7_LACRH Prolipoprotein diacylglyceryl transferase...    35   2.2  
tr|A6CXR2|A6CXR2_9VIBR Putative PRS2 protein OS=Vibrio shilonii ...    35   2.9  
tr|Q03AM7|Q03AM7_LACC3 Prolipoprotein diacylglyceryltransferase ...    34   4.9  
tr|B3WCP5|B3WCP5_LACCB Prolipoprotein diacylglyceryl transferase...    34   4.9  
tr|B7C683|B7C683_9FIRM Putative uncharacterized protein OS=Roseb...    33   8.3  
tr|Q9VRK2|Q9VRK2_DROME CG4597 OS=Drosophila melanogaster GN=CG45...    33   8.3  
tr|B6NYF4|B6NYF4_BRAFL Putative uncharacterized protein (Fragmen...    33   8.3  
tr|B4PID6|B4PID6_DROYA GE21479 OS=Drosophila yakuba GN=GE21479 P...    33   8.3  
tr|B8LTC9|B8LTC9_9EURO Putative uncharacterized protein OS=Talar...    33   8.3  

>tr|B5QKA7|B5QKA7_LACRH Prolipoprotein diacylglyceryl transferase
           OS=Lactobacillus rhamnosus HN001 GN=LRH_05199 PE=4 SV=1
          Length = 275

 Score = 35.0 bits (79), Expect = 2.2
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = +1

Query: 325 TSLCLCRGLHLVELSFQSVKNLGTQSRPSFLDDTHWMLLG 444
           TSL   RGLHL E   Q +   G   +P+FL ++ W L+G
Sbjct: 148 TSLAYLRGLHLPEFIIQQMNIGGAYRQPTFLYESMWNLVG 187


>tr|A6CXR2|A6CXR2_9VIBR Putative PRS2 protein OS=Vibrio shilonii AK1
           GN=VSAK1_18674 PE=4 SV=1
          Length = 144

 Score = 34.7 bits (78), Expect = 2.9
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
 Frame = +1

Query: 244 IALFWHRISPSIPIQALVA*YAFMSLFTS--------LCLCRGLHLVELSFQSVKNLGTQ 399
           + +F+ R+S S+ IQ L+   A +++ T         L +C G+ +V    Q V +    
Sbjct: 62  VMVFYFRLSRSVFIQMLIFTLACLAIITFAAMLGVSVLTVCIGMFVVLWIMQFVGHKIEG 121

Query: 400 SRPSFLDDTHWMLLG 444
            +PSF DD  ++L+G
Sbjct: 122 KKPSFFDDLQFLLIG 136


>tr|Q03AM7|Q03AM7_LACC3 Prolipoprotein diacylglyceryltransferase
           OS=Lactobacillus casei (strain ATCC 334) GN=LSEI_0946
           PE=4 SV=1
          Length = 275

 Score = 33.9 bits (76), Expect = 4.9
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +1

Query: 325 TSLCLCRGLHLVELSFQSVKNLGTQSRPSFLDDTHWMLLG 444
           T+L   RGLHL E   Q +   G   +P+FL ++ W L+G
Sbjct: 148 TTLAYLRGLHLPEFIIQQMNIGGAYRQPTFLYESMWNLVG 187


>tr|B3WCP5|B3WCP5_LACCB Prolipoprotein diacylglyceryl transferase
           OS=Lactobacillus casei (strain BL23) GN=lgt PE=4 SV=1
          Length = 288

 Score = 33.9 bits (76), Expect = 4.9
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +1

Query: 325 TSLCLCRGLHLVELSFQSVKNLGTQSRPSFLDDTHWMLLG 444
           T+L   RGLHL E   Q +   G   +P+FL ++ W L+G
Sbjct: 161 TTLAYLRGLHLPEFIIQQMNIGGAYRQPTFLYESMWNLVG 200


>tr|B7C683|B7C683_9FIRM Putative uncharacterized protein
           OS=Roseburia intestinalis L1-82 GN=ROSINTL182_04542 PE=4
           SV=1
          Length = 281

 Score = 33.1 bits (74), Expect = 8.3
 Identities = 22/58 (37%), Positives = 26/58 (44%)
 Frame = +1

Query: 1   RASWPCLALHHVLALSLCILLIPFTSLTLRSLSQPCVCSVLIEFPTHVGVHWNLATSH 174
           + +W  +  H VLAL   I LIP   L + SLS     S    FP     HW LA  H
Sbjct: 3   KKTWKIIVRHLVLALLAIIWLIPIVWLVVTSLSTTKGVSYQHFFPE----HWTLANYH 56


>tr|Q9VRK2|Q9VRK2_DROME CG4597 OS=Drosophila melanogaster GN=CG4597
           PE=2 SV=1
          Length = 188

 Score = 33.1 bits (74), Expect = 8.3
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +3

Query: 297 RIIRIYVLIHIFMSLQRTSSCRAIFSIRQEPGNTVPSL 410
           R + ++ LI ++  + +  SCR  FSI+  PG T PSL
Sbjct: 112 RYMVLFELIQVYEEVMKLISCRIKFSIKTPPGYTEPSL 149


>tr|B6NYF4|B6NYF4_BRAFL Putative uncharacterized protein (Fragment)
           OS=Branchiostoma floridae GN=BRAFLDRAFT_154007 PE=4 SV=1
          Length = 941

 Score = 33.1 bits (74), Expect = 8.3
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
 Frame = -1

Query: 371 KDSSTR*SPLQRHKDVNKDINAYYATRA*IGIDGEILCQ----NSAMYEMLWDEI 219
           KDS+T  SP+Q+ K  +K++  +Y+    + +D  + C     NS   E LW EI
Sbjct: 161 KDSATEKSPMQQGKWQDKEVQVFYSL---VPLDESLQCPEENLNSIRQERLWGEI 212


>tr|B4PID6|B4PID6_DROYA GE21479 OS=Drosophila yakuba GN=GE21479 PE=4
           SV=1
          Length = 219

 Score = 33.1 bits (74), Expect = 8.3
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +3

Query: 297 RIIRIYVLIHIFMSLQRTSSCRAIFSIRQEPGNTVPSL 410
           R + +  LI ++  + +  SCR  FSI++ PG T PSL
Sbjct: 143 RYLVLLELIQVYEEVMKLCSCRIKFSIKKPPGYTEPSL 180


>tr|B8LTC9|B8LTC9_9EURO Putative uncharacterized protein
           OS=Talaromyces stipitatus ATCC 10500 GN=TSTA_064730 PE=4
           SV=1
          Length = 342

 Score = 33.1 bits (74), Expect = 8.3
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +2

Query: 215 HIFHPTTFHTLHCFGIESLHLFQFKLLSHNTHLCPYSHLYVFAEDFI 355
           H+  P T  +L  FG + L LF   +  H +HL    HL+ + ED +
Sbjct: 8   HLKLPVTVDSLDKFGYQGLELFVKVIFVHISHLPVAEHLHAYREDVL 54