BP912895 |
Clone id |
YMU001_000024_A11 |
Library |
YMU01 |
Length |
530 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000024_A11. |
Accession |
BP912895 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GCACGGCTGCGTCGGCCTTATGGTCACTTGATGCACCGCTGCGGTTGGCAGTGAGTTCAG CATCATCAAGCTTGGCCACCTTACGGCCTAGGAAGGAATGGGCAGCAAGGCAATAATCGC AGCCGTTGATCTCAGCGACGGCTAGGGCAATACGCTCAAGAGTCGCTATACCCAAGCCAC CCTGTGCTGATGCTGCGCTCAATTGCAGGTAGCCAGTCAGCGCAGCAGGGCTGTTGGCAA CGACGCGGAACATGTTAGGAACGCGTGCCCAGTTGTTTTTCCACAGCCTTGAGTGAGGTA TGGGTAGCAGTAGGCGCGGCGTCGATTGTGGTAGGGGTGTTCAAACGTGACATAAATTTC TCCTAGTGATTTGAAAGACAGCACGCTGTATTGGCGTGGAATAAATTGTATTTAAGAAGG TTTCGCTTGATAATCCGTTGCTATCAGACAGCTCATCTTCACGTCTTGCGCAGTCGCCAT TTCAGTGCCACTACACACCTTCGTTGACGTCACGCCGTCCTGATTTCTAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q57498 |
Definition |
sp|Q57498|Y1053_HAEIN Uncharacterized protein HI1053 OS=Haemophilus influenzae |
Align length |
81 |
Score (bit) |
41.2 |
E-value |
0.003 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A0L3B0 |
Definition |
tr|A0L3B0|A0L3B0_SHESA Alkylhydroperoxidase like protein, AhpD family OS=Shewanella sp. (strain ANA-3) |
Align length |
88 |
Score (bit) |
163.0 |
E-value |
1.0e-40 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912895|Adiantum capillus-veneris mRNA, clone: YMU001_000024_A11. (530 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A0L3B0|A0L3B0_SHESA Alkylhydroperoxidase like protein, AhpD f... 163 1e-40 tr|Q12G59|Q12G59_POLSJ Alkylhydroperoxidase AhpD core OS=Polarom... 119 7e-26 tr|B8EMA1|B8EMA1_METSI Alkylhydroperoxidase like protein, AhpD f... 118 2e-25 tr|Q120I8|Q120I8_POLSJ Alkylhydroperoxidase AhpD core OS=Polarom... 116 8e-25 tr|A6SWG5|A6SWG5_JANMA Uncharacterized conserved protein OS=Jant... 115 1e-24 tr|A5EH62|A5EH62_BRASB Putative alpha/beta hydrolase OS=Bradyrhi... 111 3e-23 tr|Q47FV8|Q47FV8_DECAR Carboxymuconolactone decarboxylase OS=Dec... 110 3e-23 tr|Q21F43|Q21F43_SACD2 Alkylhydroperoxidase AhpD core OS=Sacchar... 110 3e-23 tr|B7QRV3|B7QRV3_9RHOB Carboxymuconolactone decarboxylase OS=Rue... 108 2e-22 tr|B6YYV5|B6YYV5_9RHOB Alkylhydroperoxidase AhpD core OS=Pseudov... 105 1e-21 tr|Q7NX57|Q7NX57_CHRVO Putative uncharacterized protein OS=Chrom... 97 4e-19 tr|Q0AQF6|Q0AQF6_MARMM Uncharacterized peroxidase-related enzyme... 97 5e-19 tr|A3VWQ2|A3VWQ2_9RHOB Alkylhydroperoxidase AhpD family core dom... 97 7e-19 tr|A6DZV2|A6DZV2_9RHOB Alkylhydroperoxidase AhpD family core dom... 92 1e-17 tr|A7IDX8|A7IDX8_XANP2 Alkylhydroperoxidase like protein, AhpD f... 86 9e-16 tr|A7HGI5|A7HGI5_ANADF Alkylhydroperoxidase like protein, AhpD f... 84 6e-15 tr|A3ZSH1|A3ZSH1_9PLAN Probable Mip OS=Blastopirellula marina DS... 84 6e-15 tr|B1JAL5|B1JAL5_PSEPW Alkylhydroperoxidase like protein, AhpD f... 82 2e-14 tr|B4D476|B4D476_9BACT Uncharacterized peroxidase-related enzyme... 81 3e-14 tr|B0IY21|B0IY21_RHILT Alkylhydroperoxidase like protein, AhpD f... 81 3e-14 tr|A4BB33|A4BB33_9GAMM Carboxymuconolactone decarboxylase OS=Rei... 81 3e-14 tr|Q7ULD6|Q7ULD6_RHOBA Probable Mip OS=Rhodopirellula baltica GN... 79 1e-13 tr|Q88IP0|Q88IP0_PSEPK Alkylhydroperoxidase AhpD domain protein ... 78 2e-13 tr|Q47X72|Q47X72_COLP3 Alkylhydroperoxidase AhpD family core dom... 78 2e-13 tr|A5W3Y7|A5W3Y7_PSEP1 Uncharacterized peroxidase-related enzyme... 77 5e-13 tr|B2HHK3|B2HHK3_MYCMM Putative uncharacterized protein OS=Mycob... 76 9e-13 tr|A0PNI6|A0PNI6_MYCUA Putative uncharacterized protein OS=Mycob... 76 9e-13 tr|Q5ZTP9|Q5ZTP9_LEGPH 24 kDa macrophage-induced major protein O... 73 1e-11 tr|Q53427|Q53427_LEGPN 24 kDa macrophage-induced major protein O... 73 1e-11 tr|A8TQD2|A8TQD2_9PROT 24 kDa macrophage-induced major protein O... 73 1e-11
>tr|A0L3B0|A0L3B0_SHESA Alkylhydroperoxidase like protein, AhpD family OS=Shewanella sp. (strain ANA-3) GN=Shewana3_4328 PE=4 SV=1 Length = 184
Score = 163 bits (413), Expect(2) = 1e-40 Identities = 84/88 (95%), Positives = 85/88 (96%) Frame = -2
Query: 265 RVPNMFRVVANSPAALTGYLQLSAASAQGGLGIATLERIALAVAEINGCDYCLAAHSFLG 86 RVPNMFRVVANSPAALTGYLQLSAASAQGGLG ATLERIALAVAEINGCDYCLA HSFLG Sbjct: 30 RVPNMFRVVANSPAALTGYLQLSAASAQGGLGTATLERIALAVAEINGCDYCLAGHSFLG 89
Query: 85 RKVAKLDDAELTANRSGASSDHKADAAV 2 RKVAKLDDAELTANRSGAS+D KADAAV Sbjct: 90 RKVAKLDDAELTANRSGASNDPKADAAV 117
Score = 26.2 bits (56), Expect(2) = 1e-40 Identities = 16/29 (55%), Positives = 16/29 (55%) Frame = -1
Query: 353 MSRLNXXXXXXXXXXXXXTSLKAVEKQLG 267 MSRLN TSLKAVEKQLG Sbjct: 1 MSRLNTPTTIDAAPTATHTSLKAVEKQLG 29
>tr|Q12G59|Q12G59_POLSJ Alkylhydroperoxidase AhpD core OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=Bpro_0520 PE=3 SV=1 Length = 184
Score = 119 bits (299), Expect = 7e-26 Identities = 59/87 (67%), Positives = 71/87 (81%) Frame = -2
Query: 262 VPNMFRVVANSPAALTGYLQLSAASAQGGLGIATLERIALAVAEINGCDYCLAAHSFLGR 83 VPN+FRVVANSPAAL GY+ ++A+++G L T ERIALAVAEINGC YCLAAH++L Sbjct: 31 VPNLFRVVANSPAALQGYVDFNSAASKGKLSAQTRERIALAVAEINGCGYCLAAHTYLAG 90
Query: 82 KVAKLDDAELTANRSGASSDHKADAAV 2 VAKLD+AE+ ANR GAS+D KAD AV Sbjct: 91 NVAKLDEAEIVANRKGASNDPKADKAV 117
>tr|B8EMA1|B8EMA1_METSI Alkylhydroperoxidase like protein, AhpD family OS=Methylocella silvestris BL2 GN=Msil_2566 PE=4 SV=1 Length = 182
Score = 118 bits (295), Expect = 2e-25 Identities = 57/86 (66%), Positives = 70/86 (81%) Frame = -2
Query: 259 PNMFRVVANSPAALTGYLQLSAASAQGGLGIATLERIALAVAEINGCDYCLAAHSFLGRK 80 PN+FR++A SPAAL YL LS A ++G L T ERIALA+AE NGCDYCL+AHS+LGR Sbjct: 32 PNLFRLIATSPAALEAYLGLSGALSKGALPAPTRERIALAIAEFNGCDYCLSAHSYLGRN 91
Query: 79 VAKLDDAELTANRSGASSDHKADAAV 2 +AKLD+AE+ ANR+G S+D KADAAV Sbjct: 92 LAKLDEAEVAANRAGRSNDPKADAAV 117
>tr|Q120I8|Q120I8_POLSJ Alkylhydroperoxidase AhpD core OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=Bpro_5191 PE=4 SV=1 Length = 195
Score = 116 bits (290), Expect = 8e-25 Identities = 56/87 (64%), Positives = 70/87 (80%) Frame = -2
Query: 268 ARVPNMFRVVANSPAALTGYLQLSAASAQGGLGIATLERIALAVAEINGCDYCLAAHSFL 89 A +PN+FRVVANSPAAL GY+ ++A+++G L T ER+ALAVAEIN C YCLAAH++L Sbjct: 29 ATLPNLFRVVANSPAALQGYIDFNSAASKGKLSAQTRERVALAVAEINSCGYCLAAHTYL 88
Query: 88 GRKVAKLDDAELTANRSGASSDHKADA 8 VAKLD+AE+ ANR GASSD KAD+ Sbjct: 89 AGNVAKLDEAEIVANRKGASSDPKADS 115
>tr|A6SWG5|A6SWG5_JANMA Uncharacterized conserved protein OS=Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis) GN=mma_0922 PE=4 SV=1 Length = 199
Score = 115 bits (289), Expect = 1e-24 Identities = 56/87 (64%), Positives = 70/87 (80%) Frame = -2
Query: 262 VPNMFRVVANSPAALTGYLQLSAASAQGGLGIATLERIALAVAEINGCDYCLAAHSFLGR 83 VPN+FR+V ++PAAL GYL LS A +G L T ERIALA+AE N CDYCL+AH++L + Sbjct: 47 VPNLFRLVGSNPAALEGYLNLSGALNKGALPAPTRERIALAIAEFNACDYCLSAHTYLAK 106
Query: 82 KVAKLDDAELTANRSGASSDHKADAAV 2 +AKL DAE+TANRSG+SSD KA+AAV Sbjct: 107 NLAKLSDAEITANRSGSSSDPKAEAAV 133
>tr|A5EH62|A5EH62_BRASB Putative alpha/beta hydrolase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=BBta_3409 PE=4 SV=1 Length = 409
Score = 111 bits (277), Expect = 3e-23 Identities = 56/88 (63%), Positives = 67/88 (76%) Frame = -2
Query: 265 RVPNMFRVVANSPAALTGYLQLSAASAQGGLGIATLERIALAVAEINGCDYCLAAHSFLG 86 R PN+FR +A SP AL YL LS A +G L AT ERIALAVAE+NGC CL+A ++ G Sbjct: 30 RTPNIFRAIALSPQALACYLALSGALGKGSLPAATRERIALAVAEVNGCSDCLSAQTYFG 89
Query: 85 RKVAKLDDAELTANRSGASSDHKADAAV 2 R +A+LDDAE+TANR GAS+D KADAAV Sbjct: 90 RNLARLDDAEITANRKGASNDPKADAAV 117
>tr|Q47FV8|Q47FV8_DECAR Carboxymuconolactone decarboxylase OS=Dechloromonas aromatica (strain RCB) GN=Daro_1524 PE=4 SV=1 Length = 180
Score = 110 bits (276), Expect = 3e-23 Identities = 59/112 (52%), Positives = 74/112 (66%) Frame = -2
Query: 337 PLPQSTPRLLLPIPHSRLWKNNWARVPNMFRVVANSPAALTGYLQLSAASAQGGLGIATL 158 P TP LP+ + VPN+ ++V NSPAAL GYL L+ A +G +G T Sbjct: 7 PQTDQTPSASLPLLEAV--NRQLGVVPNLMKLVGNSPAALEGYLSLNGALGKGTIGTKTS 64
Query: 157 ERIALAVAEINGCDYCLAAHSFLGRKVAKLDDAELTANRSGASSDHKADAAV 2 ERIALAVAE+NGC YCL+AHS+LG +AKLD +EL ANR G S+D KA AA+ Sbjct: 65 ERIALAVAELNGCGYCLSAHSYLGSNLAKLDASELDANRHGGSNDPKAAAAL 116
>tr|Q21F43|Q21F43_SACD2 Alkylhydroperoxidase AhpD core OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=Sde_3431 PE=4 SV=1 Length = 183
Score = 110 bits (276), Expect = 3e-23 Identities = 54/87 (62%), Positives = 67/87 (77%) Frame = -2
Query: 262 VPNMFRVVANSPAALTGYLQLSAASAQGGLGIATLERIALAVAEINGCDYCLAAHSFLGR 83 VPN+FR+ +NSP L GY+ L++A A+G L AT ERIALA+AEINGCDYCLAAH++LGR Sbjct: 31 VPNLFRITSNSPHTLEGYIALNSALAKGTLPAATRERIALAIAEINGCDYCLAAHNYLGR 90
Query: 82 KVAKLDDAELTANRSGASSDHKADAAV 2 +AKL E+ NR G+S D KA AAV Sbjct: 91 NLAKLSSEEININRRGSSLDAKAAAAV 117
>tr|B7QRV3|B7QRV3_9RHOB Carboxymuconolactone decarboxylase OS=Ruegeria sp. R11 GN=RR11_3534 PE=4 SV=1 Length = 203
Score = 108 bits (270), Expect = 2e-22 Identities = 56/87 (64%), Positives = 65/87 (74%) Frame = -2
Query: 262 VPNMFRVVANSPAALTGYLQLSAASAQGGLGIATLERIALAVAEINGCDYCLAAHSFLGR 83 VPN+FR+ +NSPAAL GYL L+ A A G L AT ERIALAVA+ NGC YC+AAHS+LGR Sbjct: 52 VPNLFRIASNSPAALQGYLGLTGALANGTLHPATRERIALAVAQANGCGYCVAAHSYLGR 111
Query: 82 KVAKLDDAELTANRSGASSDHKADAAV 2 AKLD E+ ANR G S + KAD AV Sbjct: 112 NRAKLDADEILANRRGQSLNSKADVAV 138
>tr|B6YYV5|B6YYV5_9RHOB Alkylhydroperoxidase AhpD core OS=Pseudovibrio sp. JE062 GN=PJE062_3655 PE=4 SV=1 Length = 181
Score = 105 bits (262), Expect = 1e-21 Identities = 52/93 (55%), Positives = 66/93 (70%) Frame = -2
Query: 280 KNNWARVPNMFRVVANSPAALTGYLQLSAASAQGGLGIATLERIALAVAEINGCDYCLAA 101 K+ VPN+FR+VANSP L GYL L+ A +G L AT ERIALAVAE+NGC+YCL+A Sbjct: 25 KSQLGSVPNLFRIVANSPQTLEGYLGLNGALGKGTLPAATRERIALAVAELNGCNYCLSA 84
Query: 100 HSFLGRKVAKLDDAELTANRSGASSDHKADAAV 2 H++L +AKL + E+ NR G+S D KA AV Sbjct: 85 HTYLASNLAKLSEDEIVKNRKGSSEDAKAAVAV 117
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