BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912898|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_B02.
         (514 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O88799|ZAN_MOUSE Zonadhesin OS=Mus musculus GN=Zan PE=2 SV=1        32   1.8  
sp|Q9JMK8|VPS54_RAT Vacuolar protein sorting-associated protein ...    31   3.9  
sp|Q5SPW0|VPS54_MOUSE Vacuolar protein sorting-associated protei...    31   3.9  
sp|Q75AS3|CSN10_ASHGO COP9 signalosome complex subunit 10 OS=Ash...    30   6.7  

>sp|O88799|ZAN_MOUSE Zonadhesin OS=Mus musculus GN=Zan PE=2 SV=1
          Length = 5376

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 31/137 (22%), Positives = 50/137 (36%), Gaps = 13/137 (9%)
 Frame = +1

Query: 52   SSFLRIALCE--CVRERETVTGYLAQLLGLIPIWQKLSPHQAC-----------SRIANL 192
            + F+   +CE  CV    ++ GY+      +P+      H  C           S + N 
Sbjct: 5168 AKFVTPKVCEGPCVEGCASLPGYIYSDTQSLPV-----THCGCTADGIYYKLGDSFVTND 5222

Query: 193  QSLNCRCHSTQRRGVRSTFLLQGMCLCLPYACNY*KAALCSNVHIFCNFF*INSCCSXXX 372
             S +C C S            QG+ LC PY C   ++ + +N    C  F  + C     
Sbjct: 5223 CSQHCTCAS------------QGILLCEPYGCRAGESCMVANFTRGC--FQDSPCLQNPC 5268

Query: 373  XXXXTSQMATSNFLCHC 423
                  +   + F+CHC
Sbjct: 5269 HNDGRCEEQGATFICHC 5285


>sp|Q9JMK8|VPS54_RAT Vacuolar protein sorting-associated protein 54
           OS=Rattus norvegicus GN=Vps54 PE=2 SV=1
          Length = 965

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
 Frame = -1

Query: 298 FSSYRH----RVGKGTC--LEEERLISLLFFGLSDIGN*GIEDLQFLSMLGEEKV 152
           FS+Y H    R  +G C  LEEERL+SL+F  L          L FL + GEE +
Sbjct: 346 FSTYSHSDLNRPLEGECQVLEEERLVSLVFGLLEQ------RKLNFLEIYGEETI 394


>sp|Q5SPW0|VPS54_MOUSE Vacuolar protein sorting-associated protein
           54 OS=Mus musculus GN=Vps54 PE=1 SV=1
          Length = 977

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
 Frame = -1

Query: 298 FSSYRH----RVGKGTC--LEEERLISLLFFGLSDIGN*GIEDLQFLSMLGEEKV 152
           FS+Y H    R  +G C  LEEERL+SL+F  L          L FL + GEE +
Sbjct: 358 FSTYSHSDLNRPLEGECQVLEEERLVSLVFGLLKQ------RKLNFLEIYGEEMI 406


>sp|Q75AS3|CSN10_ASHGO COP9 signalosome complex subunit 10 OS=Ashbya
           gossypii GN=RRI2 PE=3 SV=1
          Length = 553

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
 Frame = +1

Query: 1   VLNLLIQYECT*TRSYPSSFLRIALCECVRERETVTGYLAQLLGLI---PIWQKLSPHQA 171
           V NL + YE       PS F R AL      R  +    A+L  L     +W  ++P  +
Sbjct: 361 VHNLQLLYESYVALDLPS-FAR-ALDLLAPFRSALAPLFARLCALARERKLWDAIAPLHS 418

Query: 172 CSRIANLQSLNCRCHSTQRRGVRSTFLLQGM 264
           C  +A++Q L C   S+  R    T ++QG+
Sbjct: 419 CIALADIQRLLCIGSSSLSRDSLLTLMMQGV 449

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912898|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_B02.
         (514 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q28PG0|Q28PG0_JANSC Putative uncharacterized protein OS=Janna...    33   8.1  
tr|Q1LYB3|Q1LYB3_DANRE Novel protein similar to human rearranged...    33   8.3  

>tr|Q28PG0|Q28PG0_JANSC Putative uncharacterized protein
           OS=Jannaschia sp. (strain CCS1) GN=Jann_2485 PE=4 SV=1
          Length = 511

 Score = 33.1 bits (74), Expect = 8.1
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = +3

Query: 105 DWLSSSIARPHSNMAKTFSSPSM 173
           DWLS +I RPH+N+A+  S+P++
Sbjct: 40  DWLSDTITRPHANIAEDASTPAI 62


>tr|Q1LYB3|Q1LYB3_DANRE Novel protein similar to human rearranged
            L-myc fusion sequence (RLF) (Fragment) OS=Danio rerio
            GN=CH211-154E15.8-001 PE=2 SV=1
          Length = 2028

 Score = 33.1 bits (74), Expect = 8.3
 Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 11/78 (14%)
 Frame = -1

Query: 346  FKRNCKKCEHLNIKLPFSS--------YRHRVGKGTCLEEERLISLLFFGLSDIGN*GIE 191
            F+RNC   E+     P S          RH + KG C   + L  +L   L   G+  I+
Sbjct: 1939 FRRNCSVKENTESGAPISRSRRFRSSPLRHLISKGECTSIQNLRMILERALGGCGDQAIK 1998

Query: 190  DLQFLS---MLGEEKVFA 146
             LQFL    +L   K FA
Sbjct: 1999 QLQFLKPVVVLERPKSFA 2016