BP912901
Clone id YMU001_000024_B05
Library
Length 533
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000024_B05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTTTTTTTTTTTTTTGAAAGTTAACACTAATCGTGCTGTAGATGGTCTCATTACTTTTG
AAACGTAGAGACCTAGCCCTGGGAATTGATACAAAAAGGCTATAATAGCCTTCATGCAGG
CAACTGTAATATTTTCCTGTGGAATGGTTCACTAGAATTTGGAACATGCTTTTTACAAGA
GATTTATGCTATAATGTACAGACCTATCATAAACTTTCAATGTGTGCAGAAATGATAGGA
CCACATATTGGAAAGCCTCTAATGCTCCATGCCTCCAGACTTTCTAGTGCCTGAGAACAG
AGAGCAGCAATCAAAGAGATCGGGCTCTACTACAGGCAGCCGTCTTATTCTTGCACTGCT
CCTGCGACGTGCATGAGCATGAACTAATTCAGGCAAATTGATATGAGGCAAAACAATGGC
CGCTTTGGCCCCCCATTAAAGCCTTCAGCTCCAACTTTTGAAAAGGGCTGCTGTTGGGAT
CATAATAGAAACCGTGAACTGAGCCATCACTACGAGAAAAGCATACATAGTAA
■■Homology search results ■■ -
sp_hit_id P53242
Definition sp|P53242|YG29_YEAST Uncharacterized protein YGR066C OS=Saccharomyces cerevisiae
Align length 29
Score (bit) 39.7
E-value 0.009
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912901|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_B05.
(517 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P53242|YG29_YEAST Uncharacterized protein YGR066C OS=Saccharo... 40 0.009
sp|Q9CPY6|CQ039_MOUSE Uncharacterized protein C17orf39 homolog O... 35 0.16
sp|Q8IVV7|CQ039_HUMAN Uncharacterized protein C17orf39 OS=Homo s... 35 0.16
sp|P38263|VID24_YEAST Vacuolar import and degradation protein 24... 35 0.21
sp|A2STA7|TRPD_METLZ Anthranilate phosphoribosyltransferase OS=M... 30 5.2
sp|Q9UT04|YLWD_SCHPO Uncharacterized protein P8A3.13c OS=Schizos... 30 6.8
sp|Q3ZJ93|RPOB_PSEAK DNA-directed RNA polymerase subunit beta OS... 30 6.8
sp|Q08AA9|NKD_ANOGA Protein naked cuticle homolog OS=Anopheles g... 30 6.8
sp|Q13351|KLF1_HUMAN Krueppel-like factor 1 OS=Homo sapiens GN=K... 30 8.7

>sp|P53242|YG29_YEAST Uncharacterized protein YGR066C
OS=Saccharomyces cerevisiae GN=YGR066C PE=1 SV=1
Length = 292

Score = 39.7 bits (91), Expect = 0.009
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = -2

Query: 516 YYVCFSRSDGSVHGFYYDPNSSPFQKLEL 430
YYVC + GSV G+YY P FQKLEL
Sbjct: 246 YYVCLDQLTGSVEGYYYHPACELFQKLEL 274


>sp|Q9CPY6|CQ039_MOUSE Uncharacterized protein C17orf39 homolog
OS=Mus musculus PE=2 SV=1
Length = 217

Score = 35.4 bits (80), Expect = 0.16
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2

Query: 516 YYVCFSRSDGSVHGFYYDPNSSPFQKLEL 430
YY+CF +S S+ G+YY +S +Q L L
Sbjct: 175 YYICFQKSAASIEGYYYHRSSEWYQSLNL 203


>sp|Q8IVV7|CQ039_HUMAN Uncharacterized protein C17orf39 OS=Homo
sapiens GN=C17orf39 PE=2 SV=1
Length = 300

Score = 35.4 bits (80), Expect = 0.16
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2

Query: 516 YYVCFSRSDGSVHGFYYDPNSSPFQKLEL 430
YY+CF +S S+ G+YY +S +Q L L
Sbjct: 258 YYICFQKSAASIEGYYYHRSSEWYQSLNL 286


>sp|P38263|VID24_YEAST Vacuolar import and degradation protein 24
OS=Saccharomyces cerevisiae GN=VID24 PE=1 SV=1
Length = 362

Score = 35.0 bits (79), Expect = 0.21
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -2

Query: 516 YYVCFSRSDGSVHGFYYDPNSSPFQKLELKALMGGQSGHCFASYQFA 376
YY+ + G++ GFYY ++ FQ+LEL + + S++FA
Sbjct: 316 YYIVHDQVTGNIQGFYYHQDAEKFQQLELVPSLKNKVESSDCSFEFA 362


>sp|A2STA7|TRPD_METLZ Anthranilate phosphoribosyltransferase
OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM
4855 / Z) GN=trpD PE=3 SV=1
Length = 340

Score = 30.4 bits (67), Expect = 5.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -2

Query: 495 SDGSVHGFYYDPNSSPFQKLELKALMGGQS 406
+DG V + DP+S FQK + +L GG S
Sbjct: 239 NDGQVRSYSLDPSSFGFQKADAASLFGGDS 268


>sp|Q9UT04|YLWD_SCHPO Uncharacterized protein P8A3.13c
OS=Schizosaccharomyces pombe GN=SPAP8A3.13c PE=2 SV=1
Length = 547

Score = 30.0 bits (66), Expect = 6.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2

Query: 516 YYVCFSRSDGSVHGFYYDP 460
Y+ C R +G + G+YYDP
Sbjct: 504 YFCCLCRENGYIQGYYYDP 522


>sp|Q3ZJ93|RPOB_PSEAK DNA-directed RNA polymerase subunit beta
OS=Pseudendoclonium akinetum GN=rpoB PE=3 SV=1
Length = 2178

Score = 30.0 bits (66), Expect = 6.8
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = -1

Query: 169 KSLVKSMFQILVNHSTGKYYSCLHEGYYSLFVSIPRARSLRFKSNETIY 23
K+ VK F+I+ N + KY+ +++ ++ + R R+L F SN ++
Sbjct: 1292 KTKVKKKFEIVYNENKKKYFQKINKNFF--LPLLCRTRNLNFASNSLLF 1338


>sp|Q08AA9|NKD_ANOGA Protein naked cuticle homolog OS=Anopheles
gambiae GN=nkd PE=2 SV=1
Length = 886

Score = 30.0 bits (66), Expect = 6.8
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +1

Query: 247 CSMPPDFLVPENREQQSK-RSGSTTGS 324
CS PPD L+ +REQ K +S ++TGS
Sbjct: 43 CSAPPDLLLTSDREQMLKVKSSASTGS 69


>sp|Q13351|KLF1_HUMAN Krueppel-like factor 1 OS=Homo sapiens GN=KLF1
PE=1 SV=1
Length = 362

Score = 29.6 bits (65), Expect = 8.7
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3

Query: 318 RQPSYSCTAPATCMSMN*FRQID--MRQNNGRFGPPLKPSAPTFEKGCCWDHNRNRELSH 491
RQ +++C P S + +R + G KP A T+E GC W R+ EL+
Sbjct: 275 RQAAHTCAHPGCGKSYTKSSHLKAHLRTHTGE-----KPYACTWE-GCGWRFARSDELTR 328

Query: 492 HYEK 503
HY K
Sbjct: 329 HYRK 332


tr_hit_id A9T7B7
Definition tr|A9T7B7|A9T7B7_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 46
Score (bit) 84.3
E-value 3.0e-15
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912901|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_B05.
(517 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9T7B7|A9T7B7_PHYPA Predicted protein (Fragment) OS=Physcomit... 84 3e-15
tr|A9NNZ9|A9NNZ9_PICSI Putative uncharacterized protein OS=Picea... 82 1e-14
tr|A8MQJ8|A8MQJ8_ARATH Uncharacterized protein At2g37680.1 OS=Ar... 75 3e-12
tr|A7PNR1|A7PNR1_VITVI Chromosome chr8 scaffold_23, whole genome... 74 4e-12
tr|A5C6Z4|A5C6Z4_VITVI Putative uncharacterized protein OS=Vitis... 74 4e-12
tr|B6UHY7|B6UHY7_MAIZE FHY1 OS=Zea mays PE=2 SV=1 72 2e-11
tr|B6TB48|B6TB48_MAIZE FHY1 OS=Zea mays PE=2 SV=1 72 2e-11
tr|B6T924|B6T924_MAIZE Putative uncharacterized protein OS=Zea m... 72 2e-11
tr|B4FJV1|B4FJV1_MAIZE Putative uncharacterized protein OS=Zea m... 71 4e-11
tr|B4F8C6|B4F8C6_MAIZE Putative uncharacterized protein OS=Zea m... 70 5e-11
tr|Q84SX9|Q84SX9_ORYSJ Putative uncharacterized protein OSJNBa00... 69 1e-10
tr|Q5ZBM4|Q5ZBM4_ORYSJ cDNA clone:006-202-F03, full insert seque... 69 1e-10
tr|Q10F72|Q10F72_ORYSJ Os03g0679000 protein OS=Oryza sativa subs... 69 1e-10
tr|B8APH7|B8APH7_ORYSI Putative uncharacterized protein OS=Oryza... 69 1e-10
tr|A2ZP57|A2ZP57_ORYSJ Putative uncharacterized protein OS=Oryza... 69 1e-10
tr|A2WKK4|A2WKK4_ORYSI Putative uncharacterized protein OS=Oryza... 69 1e-10
tr|Q0U8W1|Q0U8W1_PHANO Putative uncharacterized protein OS=Phaeo... 53 1e-05
tr|O80936|O80936_ARATH Putative uncharacterized protein At2g3768... 47 7e-04
tr|B2VWZ5|B2VWZ5_PYRTR Putative uncharacterized protein OS=Pyren... 45 0.002
tr|A2RAT9|A2RAT9_ASPNC Contig An18c0150, complete genome. OS=Asp... 44 0.005
tr|Q1E0J2|Q1E0J2_COCIM Putative uncharacterized protein OS=Cocci... 44 0.006
tr|Q6CBK8|Q6CBK8_YARLI YALI0C17897p OS=Yarrowia lipolytica GN=YA... 43 0.011
tr|Q5B5V6|Q5B5V6_EMENI Putative uncharacterized protein OS=Emeri... 43 0.011
tr|B6HCU7|B6HCU7_PENCH Pc18g02230 protein OS=Penicillium chrysog... 43 0.011
tr|A6SE55|A6SE55_BOTFB Putative uncharacterized protein OS=Botry... 43 0.011
tr|B8NRU0|B8NRU0_ASPFL Putative uncharacterized protein OS=Asper... 42 0.014
tr|B8M5X7|B8M5X7_9EURO Putative uncharacterized protein OS=Talar... 42 0.014
tr|B6Q6H4|B6Q6H4_PENMA Putative uncharacterized protein OS=Penic... 42 0.014
tr|B6Q6H3|B6Q6H3_PENMA Putative uncharacterized protein OS=Penic... 42 0.014
tr|Q4WJM0|Q4WJM0_ASPFU Putative uncharacterized protein OS=Asper... 42 0.018

>tr|A9T7B7|A9T7B7_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_141330 PE=4 SV=1
Length = 210

Score = 84.3 bits (207), Expect = 3e-15
Identities = 37/46 (80%), Positives = 42/46 (91%)
Frame = -2

Query: 516 YYVCFSRSDGSVHGFYYDPNSSPFQKLELKALMGGQSGHCFASYQF 379
YYVCFSRSDGSV+GFYYDPNSSP+QKLELKA G++GH FA+YQF
Sbjct: 164 YYVCFSRSDGSVNGFYYDPNSSPYQKLELKATNEGRAGHSFATYQF 209


>tr|A9NNZ9|A9NNZ9_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 258

Score = 82.4 bits (202), Expect = 1e-14
Identities = 37/46 (80%), Positives = 41/46 (89%)
Frame = -2

Query: 516 YYVCFSRSDGSVHGFYYDPNSSPFQKLELKALMGGQSGHCFASYQF 379
YYVCFSRSDGSV GFYYDPNSSPFQKLELKA G++G+ FASY+F
Sbjct: 212 YYVCFSRSDGSVSGFYYDPNSSPFQKLELKATNEGRAGYSFASYEF 257


>tr|A8MQJ8|A8MQJ8_ARATH Uncharacterized protein At2g37680.1
OS=Arabidopsis thaliana GN=At2g37680 PE=4 SV=1
Length = 215

Score = 74.7 bits (182), Expect = 3e-12
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = -2

Query: 516 YYVCFSRSDGSVHGFYYDPNSSPFQKLELKALMGGQSGHCFASYQ 382
YYVCFS SDGS+ GFYYDPNSSPFQKLELK + G+SG F+SY+
Sbjct: 169 YYVCFSCSDGSISGFYYDPNSSPFQKLELKTVNEGRSGFSFSSYE 213


>tr|A7PNR1|A7PNR1_VITVI Chromosome chr8 scaffold_23, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00021358001
PE=4 SV=1
Length = 214

Score = 73.9 bits (180), Expect = 4e-12
Identities = 32/45 (71%), Positives = 39/45 (86%)
Frame = -2

Query: 516 YYVCFSRSDGSVHGFYYDPNSSPFQKLELKALMGGQSGHCFASYQ 382
YYVCFS +DGS++GFYYDPNSSPFQKLELK+ G+SG F+SY+
Sbjct: 168 YYVCFSCNDGSINGFYYDPNSSPFQKLELKSTNEGRSGFSFSSYE 212


>tr|A5C6Z4|A5C6Z4_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_019443 PE=4 SV=1
Length = 214

Score = 73.9 bits (180), Expect = 4e-12
Identities = 32/45 (71%), Positives = 39/45 (86%)
Frame = -2

Query: 516 YYVCFSRSDGSVHGFYYDPNSSPFQKLELKALMGGQSGHCFASYQ 382
YYVCFS +DGS++GFYYDPNSSPFQKLELK+ G+SG F+SY+
Sbjct: 168 YYVCFSCNDGSINGFYYDPNSSPFQKLELKSTNEGRSGFSFSSYE 212


>tr|B6UHY7|B6UHY7_MAIZE FHY1 OS=Zea mays PE=2 SV=1
Length = 218

Score = 71.6 bits (174), Expect = 2e-11
Identities = 32/45 (71%), Positives = 36/45 (80%)
Frame = -2

Query: 516 YYVCFSRSDGSVHGFYYDPNSSPFQKLELKALMGGQSGHCFASYQ 382
YYVCFS SDGS+ GFYYDPNSSPFQKLELK + SG F+SY+
Sbjct: 172 YYVCFSCSDGSISGFYYDPNSSPFQKLELKCINEKSSGFTFSSYE 216


>tr|B6TB48|B6TB48_MAIZE FHY1 OS=Zea mays PE=2 SV=1
Length = 218

Score = 71.6 bits (174), Expect = 2e-11
Identities = 32/45 (71%), Positives = 37/45 (82%)
Frame = -2

Query: 516 YYVCFSRSDGSVHGFYYDPNSSPFQKLELKALMGGQSGHCFASYQ 382
YYVCFS SDGS++GFYYDPNSSPFQKLELK +SG F+SY+
Sbjct: 172 YYVCFSCSDGSINGFYYDPNSSPFQKLELKCTNEKKSGFTFSSYE 216


>tr|B6T924|B6T924_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 253

Score = 71.6 bits (174), Expect = 2e-11
Identities = 32/45 (71%), Positives = 37/45 (82%)
Frame = -2

Query: 516 YYVCFSRSDGSVHGFYYDPNSSPFQKLELKALMGGQSGHCFASYQ 382
YYVCFS SDGS++GFYYDPNSSPFQKLELK +SG F+SY+
Sbjct: 207 YYVCFSCSDGSINGFYYDPNSSPFQKLELKCTNEKKSGFTFSSYE 251


>tr|B4FJV1|B4FJV1_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 260

Score = 70.9 bits (172), Expect = 4e-11
Identities = 32/45 (71%), Positives = 36/45 (80%)
Frame = -2

Query: 516 YYVCFSRSDGSVHGFYYDPNSSPFQKLELKALMGGQSGHCFASYQ 382
YYVCFS SDGS+ GFYYDPNSSPFQKLELK +SG F+SY+
Sbjct: 214 YYVCFSCSDGSISGFYYDPNSSPFQKLELKCTNEKKSGFTFSSYE 258


>tr|B4F8C6|B4F8C6_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 218

Score = 70.5 bits (171), Expect = 5e-11
Identities = 32/45 (71%), Positives = 35/45 (77%)
Frame = -2

Query: 516 YYVCFSRSDGSVHGFYYDPNSSPFQKLELKALMGGQSGHCFASYQ 382
YYVCFS SDGS+ GFYYDPNSSPFQKLELK SG F+SY+
Sbjct: 172 YYVCFSCSDGSISGFYYDPNSSPFQKLELKCTNEKSSGFTFSSYE 216