BP912911 |
Clone id |
YMU001_000024_C04 |
Library |
YMU01 |
Length |
560 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000024_C04. |
Accession |
BP912911 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL4054Contig1 |
Sequence |
GAGCACTGGAGATATGGAGAAAGGGGATGCGGATGCAGATGACACAGATGATGGCTTGAC TGCAGAGGAGCCTGCAGAAAAGCCTGAGAGACTTCGCCAACGCTCGGCAAAGAAACTCTC ATATGCAGAAGATGCTGATGAAGAGATGGATTGGGAATCTGATGAAGGGAGGGACATCGA ACAGCTTTCAAGCAAGGCAAAAAAAAGAAGCAGAAAGCCGACTCCTGCTCAGTGTGCGGG TCAGGAGACAAACTTACATTCTGTTACACTTGTCCAGAGGCATATCACCCAAGTTGCTTA ACTCCCCCTCTCAAGGTTGCGCCAAGAGGCAGATGGAGCTGTCCTCATTGTGTTGATCCA ATGTCAGAGATTGACAAATTTCTTGATTGTCAAATGCGGCCACAAGAGAATTTGGAAGAG ACAGATGAATCTAAAGAGTCATTGACTCGGCAGTATCTCGTGAAATGGAAGTCAAGATCT TACTTGCATTGTTCATGGCTTCCTGAGACTGAACTTGAGAAAGCCGCGAATTCTTCCAGG AGTACCTGCAGGTAATATCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9S775 |
Definition |
sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis thaliana |
Align length |
109 |
Score (bit) |
124.0 |
E-value |
2.0e-28 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912911|Adiantum capillus-veneris mRNA, clone: YMU001_000024_C04. (560 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE... 124 2e-28 sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3... 92 2e-18 sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein M... 88 3e-17 sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3... 82 2e-15 sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4... 81 3e-15 sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4... 81 3e-15 sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5... 75 2e-13 sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3... 70 5e-12 sp|Q6ZPK0|PF21A_MOUSE PHD finger protein 21A OS=Mus musculus GN=... 63 9e-10 sp|Q96BD5|PF21A_HUMAN PHD finger protein 21A OS=Homo sapiens GN=... 63 9e-10 sp|Q96EK2|PF21B_HUMAN PHD finger protein 21B OS=Homo sapiens GN=... 62 1e-09 sp|Q5F3R2|JAD1B_CHICK Histone demethylase JARID1B OS=Gallus gall... 55 9e-09 sp|O43918|AIRE_HUMAN Autoimmune regulator OS=Homo sapiens GN=AIR... 59 1e-08 sp|Q9Z0E3|AIRE_MOUSE Autoimmune regulator OS=Mus musculus GN=Air... 58 4e-08 sp|P58268|REQU_CHICK Zinc finger protein ubi-d4 OS=Gallus gallus... 57 5e-08 sp|Q8C966|PF21B_MOUSE PHD finger protein 21B OS=Mus musculus GN=... 57 6e-08 sp|Q5XUN4|JAD1D_PANTR Histone demethylase JARID1D OS=Pan troglod... 56 1e-07 sp|Q9BY66|JAD1D_HUMAN Histone demethylase JARID1D OS=Homo sapien... 56 1e-07 sp|Q80Y84|JAD1B_MOUSE Histone demethylase JARID1B OS=Mus musculu... 55 2e-07 sp|Q9UGL1|JAD1B_HUMAN Histone demethylase JARID1B OS=Homo sapien... 55 2e-07 sp|Q3UXZ9|JAD1A_MOUSE Histone demethylase JARID1A OS=Mus musculu... 55 2e-07 sp|P29375|JAD1A_HUMAN Histone demethylase JARID1A OS=Homo sapien... 55 2e-07 sp|Q9HB58|SP110_HUMAN Sp110 nuclear body protein OS=Homo sapiens... 55 3e-07 sp|Q6IQX0|JA1BB_DANRE Histone demethylase JARID1B-B OS=Danio rer... 55 3e-07 sp|Q9QX66|DPF1_MOUSE Zinc finger protein neuro-d4 OS=Mus musculu... 55 3e-07 sp|Q92785|REQU_HUMAN Zinc finger protein ubi-d4 OS=Homo sapiens ... 54 4e-07 sp|Q9W636|REQUB_XENLA Zinc finger protein ubi-d4 B (Fragment) OS... 54 5e-07 sp|Q61103|REQU_MOUSE Zinc finger protein ubi-d4 OS=Mus musculus ... 54 7e-07 sp|Q9W638|REQUA_XENLA Zinc finger protein ubi-d4 A OS=Xenopus la... 54 7e-07 sp|Q9VMJ7|JAD1_DROME Histone demethylase lid OS=Drosophila melan... 54 7e-07
>sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis thaliana GN=PKL PE=1 SV=1 Length = 1384
Score = 124 bits (312), Expect = 2e-28 Identities = 55/109 (50%), Positives = 68/109 (62%), Gaps = 3/109 (2%) Frame = +1
Query: 220 DSCSVCGSGDKLTFCYTCPEAYHPSCLTPPLKVAPRGRWSCPHCVDPMSEIDKFLDCQMR 399 ++C CG L C TC A+H CL PPLK A W CP CV P++EIDK LDC+MR Sbjct: 50 NACQACGESTNLVSCNTCTYAFHAKCLVPPLKDASVENWRCPECVSPLNEIDKILDCEMR 109
Query: 400 PQENLEETD---ESKESLTRQYLVKWKSRSYLHCSWLPETELEKAANSS 537 P ++ E+ E K +QYLVKWK SYLHCSW+PE E +KA S+ Sbjct: 110 PTKSSEQGSSDAEPKPIFVKQYLVKWKGLSYLHCSWVPEKEFQKAYKSN 158
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila melanogaster GN=Chd3 PE=2 SV=3 Length = 892
Score = 91.7 bits (226), Expect = 2e-18 Identities = 38/97 (39%), Positives = 53/97 (54%) Frame = +1
Query: 226 CSVCGSGDKLTFCYTCPEAYHPSCLTPPLKVAPRGRWSCPHCVDPMSEIDKFLDCQMRPQ 405 C VC G L C +CP YH +CL+PPLK P+G W CP C+ + +K L + Sbjct: 38 CKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGDWICPRCIPLPGKAEKILSWRWALD 97
Query: 406 ENLEETDESKESLTRQYLVKWKSRSYLHCSWLPETEL 516 ++ E SK R+Y +KW SY HC W+PE ++ Sbjct: 98 RSV-ELRTSKGEKRREYFIKWHGMSYWHCEWIPEGQM 133
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog OS=Drosophila melanogaster GN=Mi-2 PE=1 SV=2 Length = 1982
Score = 87.8 bits (216), Expect = 3e-17 Identities = 40/105 (38%), Positives = 54/105 (51%), Gaps = 7/105 (6%) Frame = +1
Query: 226 CSVCGSGDKLTFCYTCPEAYHPSCLTPPLKVAPRGRWSCPHCVDP--MSEIDKFLDCQMR 399 C VC G +L C +CP AYH CL PPL P G W CP C P + +K + + Sbjct: 440 CRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCSCPPLTGKAEKIITWRWA 499
Query: 400 PQENLEETDESK-----ESLTRQYLVKWKSRSYLHCSWLPETELE 519 + N + SK S R+Y +KW + SY HC W+PE +L+ Sbjct: 500 QRSNDDGPSTSKGSKNSNSRVREYFIKWHNMSYWHCEWVPEVQLD 544
Score = 63.5 bits (153), Expect = 7e-10 Identities = 24/44 (54%), Positives = 27/44 (61%) Frame = +1
Query: 220 DSCSVCGSGDKLTFCYTCPEAYHPSCLTPPLKVAPRGRWSCPHC 351 D C VC G ++ C TCP AYH CL P L P G+WSCPHC Sbjct: 378 DYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHC 421
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog OS=Caenorhabditis elegans GN=chd-3 PE=2 SV=2 Length = 1787
Score = 82.0 bits (201), Expect = 2e-15 Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 20/120 (16%) Frame = +1
Query: 220 DSCSVCGSGDKLTFCYTCPEAYHPSCLTPPLKVAPRGRWSCPHCV--DPMSEIDKFLDCQ 393 D C +C + C TCP +YH C+ PPL P G WSCP C+ +P I+K L + Sbjct: 329 DYCRICKETSNILLCDTCPSSYHAYCIDPPLTEIPEGEWSCPRCIIPEPAQRIEKILSWR 388
Query: 394 MR------PQENLEETDESKESL------------TRQYLVKWKSRSYLHCSWLPETELE 519 + P E E + SK+ + R++ VKWK +Y C WL ET ++ Sbjct: 389 WKEISYPEPLECKEGEEASKDDVFLKPPRKMEPRREREFFVKWKYLAYWQCEWLSETLMD 448
Score = 54.7 bits (130), Expect = 3e-07 Identities = 19/44 (43%), Positives = 26/44 (59%) Frame = +1
Query: 220 DSCSVCGSGDKLTFCYTCPEAYHPSCLTPPLKVAPRGRWSCPHC 351 ++C VC +L C TC AYH +C+ ++ P G WSCPHC Sbjct: 266 ENCEVCNQDGELMLCDTCTRAYHVACIDENMEQPPEGDWSCPHC 309
>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus GN=Chd4 PE=1 SV=1 Length = 1915
Score = 81.3 bits (199), Expect = 3e-15 Identities = 43/113 (38%), Positives = 53/113 (46%), Gaps = 15/113 (13%) Frame = +1
Query: 226 CSVCGSGDKLTFCYTCPEAYHPSCLTPPLKVAPRGRWSCPHCVDP--MSEIDKFLDCQM- 396 C VC G +L C TCP +YH CL PPL P G W CP C P ++ K L + Sbjct: 445 CRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGKVQKILIWKWG 504
Query: 397 ---------RPQENLEETDESKE---SLTRQYLVKWKSRSYLHCSWLPETELE 519 RP + T K RQ+ VKW+ SY HCSW+ E +LE Sbjct: 505 QPPSPTPVPRPPDADPNTPSPKPLEGRPERQFFVKWQGMSYWHCSWVSELQLE 557
Score = 65.9 bits (159), Expect = 1e-10 Identities = 24/44 (54%), Positives = 29/44 (65%) Frame = +1
Query: 220 DSCSVCGSGDKLTFCYTCPEAYHPSCLTPPLKVAPRGRWSCPHC 351 D C VC G ++ C TCP AYH CL P ++ AP G+WSCPHC Sbjct: 364 DYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 407
>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4 PE=1 SV=1 Length = 1912
Score = 81.3 bits (199), Expect = 3e-15 Identities = 43/113 (38%), Positives = 53/113 (46%), Gaps = 15/113 (13%) Frame = +1
Query: 226 CSVCGSGDKLTFCYTCPEAYHPSCLTPPLKVAPRGRWSCPHCVDP--MSEIDKFLDCQM- 396 C VC G +L C TCP +YH CL PPL P G W CP C P ++ K L + Sbjct: 452 CRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGKVQKILIWKWG 511
Query: 397 ---------RPQENLEETDESKE---SLTRQYLVKWKSRSYLHCSWLPETELE 519 RP + T K RQ+ VKW+ SY HCSW+ E +LE Sbjct: 512 QPPSPTPVPRPPDADPNTPSPKPLEGRPERQFFVKWQGMSYWHCSWVSELQLE 564
Score = 65.9 bits (159), Expect = 1e-10 Identities = 24/44 (54%), Positives = 29/44 (65%) Frame = +1
Query: 220 DSCSVCGSGDKLTFCYTCPEAYHPSCLTPPLKVAPRGRWSCPHC 351 D C VC G ++ C TCP AYH CL P ++ AP G+WSCPHC Sbjct: 371 DYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 414
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5 PE=2 SV=1 Length = 1954
Score = 75.5 bits (184), Expect = 2e-13 Identities = 39/114 (34%), Positives = 53/114 (46%), Gaps = 16/114 (14%) Frame = +1
Query: 226 CSVCGSGDKLTFCYTCPEAYHPSCLTPPLKVAPRGRWSCPHCVDP--MSEIDKFLDCQMR 399 C VC G +L C CP +YH CL PPL P G W CP C P ++ + L + Sbjct: 419 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWT 478
Query: 400 ----------PQENLEETDESKESL----TRQYLVKWKSRSYLHCSWLPETELE 519 P ++E + + L R++ VKW SY HCSW+ E +LE Sbjct: 479 EPPAPFMVGLPGPDVEPSLPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLE 532
Score = 66.2 bits (160), Expect = 1e-10 Identities = 25/44 (56%), Positives = 29/44 (65%) Frame = +1
Query: 220 DSCSVCGSGDKLTFCYTCPEAYHPSCLTPPLKVAPRGRWSCPHC 351 D C VC G ++ C TCP AYH CL P L+ AP G+WSCPHC Sbjct: 344 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 387
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3 PE=1 SV=3 Length = 2000
Score = 70.5 bits (171), Expect = 5e-12 Identities = 38/113 (33%), Positives = 50/113 (44%), Gaps = 15/113 (13%) Frame = +1
Query: 226 CSVCGSGDKLTFCYTCPEAYHPSCLTPPLKVAPRGRWSCPHCVDPM--SEIDKFLDCQM- 396 C VC G +L C C +YH CL PPL P G W CP C P+ + K L + Sbjct: 459 CRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLKGRVQKILHWRWG 518
Query: 397 -------RPQE-----NLEETDESKESLTRQYLVKWKSRSYLHCSWLPETELE 519 PQ+ ++ + R++ VKW SY HCSW E +LE Sbjct: 519 EPPVAVPAPQQADGNPDVPPPRPLQGRSEREFFVKWVGLSYWHCSWAKELQLE 571
Score = 67.4 bits (163), Expect = 5e-11 Identities = 33/91 (36%), Positives = 45/91 (49%) Frame = +1
Query: 220 DSCSVCGSGDKLTFCYTCPEAYHPSCLTPPLKVAPRGRWSCPHCVDPMSEIDKFLDCQMR 399 D C VC G ++ C TCP AYH CL P L AP G+WSCPHC + + + + Sbjct: 380 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEEEEEY 439
Query: 400 PQENLEETDESKESLTRQYLVKWKSRSYLHC 492 +E EE ++ +E +Y K L C Sbjct: 440 EEEGEEEGEKEEEDDHMEYCRVCKDGGELLC 470
>sp|Q6ZPK0|PF21A_MOUSE PHD finger protein 21A OS=Mus musculus GN=Phf21a PE=1 SV=2 Length = 659
Score = 63.2 bits (152), Expect = 9e-10 Identities = 25/48 (52%), Positives = 27/48 (56%) Frame = +1
Query: 220 DSCSVCGSGDKLTFCYTCPEAYHPSCLTPPLKVAPRGRWSCPHCVDPM 363 D CSVC +L C TC YH CL PPLK P+G W CP C D M Sbjct: 469 DFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRCQDQM 516
>sp|Q96BD5|PF21A_HUMAN PHD finger protein 21A OS=Homo sapiens GN=PHF21A PE=1 SV=1 Length = 680
Score = 63.2 bits (152), Expect = 9e-10 Identities = 25/48 (52%), Positives = 27/48 (56%) Frame = +1
Query: 220 DSCSVCGSGDKLTFCYTCPEAYHPSCLTPPLKVAPRGRWSCPHCVDPM 363 D CSVC +L C TC YH CL PPLK P+G W CP C D M Sbjct: 489 DFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQM 536
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RX41 |
Definition |
tr|A9RX41|A9RX41_PHYPA SNF2 family DNA-dependent ATPase (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
110 |
Score (bit) |
126.0 |
E-value |
9.0e-31 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912911|Adiantum capillus-veneris mRNA, clone: YMU001_000024_C04. (560 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RX41|A9RX41_PHYPA SNF2 family DNA-dependent ATPase (Fragmen... 126 9e-31 tr|A9TI22|A9TI22_PHYPA SNF2 family DNA-dependent ATPase (Fragmen... 125 4e-29 tr|A7P5Y0|A7P5Y0_VITVI Chromosome chr4 scaffold_6, whole genome ... 121 2e-26 tr|Q6YNJ6|Q6YNJ6_ORYSA Chromatin-remodeling factor CHD3 OS=Oryza... 102 2e-20 tr|Q6YNJ5|Q6YNJ5_ORYSI Chromatin-remodeling factor CHD3 OS=Oryza... 102 2e-20 tr|Q5SML0|Q5SML0_ORYSJ Chromatin-remodeling factor CHD3 OS=Oryza... 102 2e-20 tr|Q0DE21|Q0DE21_ORYSJ Os06g0183800 protein (Fragment) OS=Oryza ... 102 2e-20 tr|B3NID0|B3NID0_DROER GG16034 OS=Drosophila erecta GN=Chd3 PE=4... 94 7e-18 tr|Q59E34|Q59E34_DROME Mi-2, isoform B OS=Drosophila melanogaste... 88 4e-16 tr|B4PFW6|B4PFW6_DROYA GE22457 OS=Drosophila yakuba GN=Dyak\GE22... 88 4e-16 tr|B4IIS0|B4IIS0_DROSE GM15785 OS=Drosophila sechellia GN=GM1578... 88 4e-16 tr|B3NE02|B3NE02_DROER GG13363 OS=Drosophila erecta GN=GG13363 P... 88 4e-16 tr|A7S9J4|A7S9J4_NEMVE Predicted protein OS=Nematostella vectens... 87 5e-16 tr|B4IIK5|B4IIK5_DROSE GM19418 OS=Drosophila sechellia GN=Chd3 P... 86 1e-15 tr|B3S0B1|B3S0B1_TRIAD Putative uncharacterized protein (Fragmen... 86 1e-15 tr|B4PGH5|B4PGH5_DROYA GE19602 OS=Drosophila yakuba GN=Chd3 PE=4... 84 5e-15 tr|A9TG47|A9TG47_PHYPA SNF2 family DNA-dependent ATPase OS=Physc... 84 7e-15 tr|B4L0W7|B4L0W7_DROMO GI13663 OS=Drosophila mojavensis GN=GI136... 84 7e-15 tr|A9S4A6|A9S4A6_PHYPA SNF2 family DNA-dependent ATPase (Fragmen... 83 1e-14 tr|B4QQG0|B4QQG0_DROSI GD14801 OS=Drosophila simulans GN=Chd3 PE... 83 1e-14 tr|B3M8T6|B3M8T6_DROAN GF10842 OS=Drosophila ananassae GN=GF1084... 83 1e-14 tr|B4IXP0|B4IXP0_DROGR GH16907 OS=Drosophila grimshawi GN=GH1690... 82 2e-14 tr|A9JRU7|A9JRU7_DANRE Wu:fd12d03 protein (Fragment) OS=Danio re... 82 2e-14 tr|A3KN93|A3KN93_XENTR Chd4 protein OS=Xenopus tropicalis GN=chd... 82 2e-14 tr|Q7PZN7|Q7PZN7_ANOGA AGAP012009-PA OS=Anopheles gambiae GN=AGA... 82 2e-14 tr|B4LBL9|B4LBL9_DROVI GJ13998 OS=Drosophila virilis GN=GJ13998 ... 82 2e-14 tr|Q7ZWN3|Q7ZWN3_XENLA B230399n07 protein OS=Xenopus laevis GN=c... 81 3e-14 tr|Q4T4E7|Q4T4E7_TETNG Chromosome undetermined SCAF9679, whole g... 81 3e-14 tr|Q8BM83|Q8BM83_MOUSE Putative uncharacterized protein (Fragmen... 81 3e-14 tr|Q5DTP7|Q5DTP7_MOUSE MKIAA4075 protein (Fragment) OS=Mus muscu... 81 3e-14
>tr|A9RX41|A9RX41_PHYPA SNF2 family DNA-dependent ATPase (Fragment) OS=Physcomitrella patens subsp. patens GN=CHR1512 PE=4 SV=1 Length = 1220
Score = 126 bits (317), Expect(2) = 9e-31 Identities = 54/110 (49%), Positives = 75/110 (68%), Gaps = 9/110 (8%) Frame = +1
Query: 220 DSCSVCGSGDKLTFCYTCPEAYHPSCLTPPLKVAPRGRWSCPHCVDPMSEIDKFLDCQMR 399 D CS+C G L C TC +H CL PP+KV PRG+WSCP CV+P+ +++KF+D QMR Sbjct: 54 DFCSICHLGGDLLCCDTCTAVFHLGCLDPPMKVVPRGKWSCPKCVNPLGDVEKFIDTQMR 113
Query: 400 PQE-------NLEE--TDESKESLTRQYLVKWKSRSYLHCSWLPETELEK 522 P + N+E+ +++ + L +QYLVKWKSRSYLHCSW+ +LE+ Sbjct: 114 PMKVPGKLPVNVEDKGSEDQPQKLVKQYLVKWKSRSYLHCSWVTAEDLER 163
Score = 30.4 bits (67), Expect(2) = 9e-31 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 4/44 (9%) Frame = +2
Query: 86 ERLRQRSAKKLSYAEDAD--EEMDW--ESDEGRDIEQLSSKAKK 205 ERLRQR+ +K Y E+ + EE +W E+DEG + E + K Sbjct: 5 ERLRQRTNRKPVYVEEEEGMEEDEWEEEADEGEEEEDEEKEVLK 48
>tr|A9TI22|A9TI22_PHYPA SNF2 family DNA-dependent ATPase (Fragment) OS=Physcomitrella patens subsp. patens GN=CHR1504 PE=4 SV=1 Length = 1245
Score = 125 bits (315), Expect(2) = 4e-29 Identities = 55/110 (50%), Positives = 73/110 (66%), Gaps = 9/110 (8%) Frame = +1
Query: 220 DSCSVCGSGDKLTFCYTCPEAYHPSCLTPPLKVAPRGRWSCPHCVDPMSEIDKFLDCQMR 399 D CS+C G L C TC +H CL PP+KV PRG+WSCP CV+P+ +++KF+D QMR Sbjct: 54 DFCSICHLGGDLLCCDTCTAVFHLGCLDPPMKVVPRGKWSCPKCVNPLGDVEKFIDTQMR 113
Query: 400 PQE-------NLEE--TDESKESLTRQYLVKWKSRSYLHCSWLPETELEK 522 P + N EE +++ L +QYLVKWKSRSYLHCSW+ +LE+ Sbjct: 114 PMKVPGRIAHNAEEKVSEDQPPKLVKQYLVKWKSRSYLHCSWVTAEDLER 163
Score = 25.8 bits (55), Expect(2) = 4e-29 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%) Frame = +2
Query: 86 ERLRQRSAKKLSYAEDAD--EEMDWESDEGRDIEQLSSKAKK 205 ERLRQR+ +K Y E+ + E +WE +E + E+ + K+ Sbjct: 5 ERLRQRTNRKPIYVEEEEGMEGDEWE-EEADEFEEEEDEEKE 45
>tr|A7P5Y0|A7P5Y0_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032703001 PE=4 SV=1 Length = 692
Score = 121 bits (304), Expect = 2e-26 Identities = 54/105 (51%), Positives = 64/105 (60%), Gaps = 3/105 (2%) Frame = +1
Query: 220 DSCSVCGSGDKLTFCYTCPEAYHPSCLTPPLKVAPRGRWSCPHCVDPMSEIDKFLDCQMR 399 DSC CG L C TC AYHP CL PPLK W CP CV P+++IDK LDC+MR Sbjct: 52 DSCQACGESGNLLSCETCTYAYHPKCLLPPLKAPLPSNWRCPQCVSPLNDIDKILDCEMR 111
Query: 400 PQ---ENLEETDESKESLTRQYLVKWKSRSYLHCSWLPETELEKA 525 P ++ SK+ +QYLVKWK SYLHC+W+PE E KA Sbjct: 112 PTVAGDSDASKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFIKA 156
>tr|Q6YNJ6|Q6YNJ6_ORYSA Chromatin-remodeling factor CHD3 OS=Oryza sativa GN=PKL PE=2 SV=1 Length = 1360
Score = 102 bits (253), Expect = 2e-20 Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 4/107 (3%) Frame = +1
Query: 220 DSCSVCGSGDKLTFCYTCPEAYHPSCLTPPLKVAPRGRWSCPHCVDPMSEIDKFLDCQMR 399 D+C CG D L C TC A+H CL P L + +WSCP CV P++E++K LDC+ Sbjct: 62 DACQKCGENDNLVPCSTCTYAFHRKCLVPRLNITS-DKWSCPECVSPLTEMEKILDCEET 120
Query: 400 PQENLEETDE----SKESLTRQYLVKWKSRSYLHCSWLPETELEKAA 528 + EET SK+ ++YL+KWK S+LHC+W+ E+E + A Sbjct: 121 KPDASEETSSSESGSKKKPVKRYLIKWKGISHLHCTWVSESEYLETA 167
>tr|Q6YNJ5|Q6YNJ5_ORYSI Chromatin-remodeling factor CHD3 OS=Oryza sativa subsp. indica GN=PKL PE=4 SV=1 Length = 1111
Score = 102 bits (253), Expect = 2e-20 Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 4/107 (3%) Frame = +1
Query: 220 DSCSVCGSGDKLTFCYTCPEAYHPSCLTPPLKVAPRGRWSCPHCVDPMSEIDKFLDCQMR 399 D+C CG D L C TC A+H CL P L + +WSCP CV P++E++K LDC+ Sbjct: 62 DACQKCGENDNLVPCSTCTYAFHRKCLVPRLNITS-DKWSCPECVSPLTEMEKILDCEET 120
Query: 400 PQENLEETDE----SKESLTRQYLVKWKSRSYLHCSWLPETELEKAA 528 + EET SK+ ++YL+KWK S+LHC+W+ E+E + A Sbjct: 121 KPDASEETSSSESGSKKKPVKRYLIKWKGISHLHCTWVSESEYLETA 167
>tr|Q5SML0|Q5SML0_ORYSJ Chromatin-remodeling factor CHD3 OS=Oryza sativa subsp. japonica GN=OSJNBb0036B04.22 PE=4 SV=1 Length = 1354
Score = 102 bits (253), Expect = 2e-20 Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 4/107 (3%) Frame = +1
Query: 220 DSCSVCGSGDKLTFCYTCPEAYHPSCLTPPLKVAPRGRWSCPHCVDPMSEIDKFLDCQMR 399 D+C CG D L C TC A+H CL P L + +WSCP CV P++E++K LDC+ Sbjct: 56 DACQKCGENDNLVPCSTCTYAFHRKCLVPRLNITS-DKWSCPECVSPLTEMEKILDCEET 114
Query: 400 PQENLEETDE----SKESLTRQYLVKWKSRSYLHCSWLPETELEKAA 528 + EET SK+ ++YL+KWK S+LHC+W+ E+E + A Sbjct: 115 KPDASEETSSSESGSKKKPVKRYLIKWKGISHLHCTWVSESEYLETA 161
>tr|Q0DE21|Q0DE21_ORYSJ Os06g0183800 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os06g0183800 PE=4 SV=1 Length = 1335
Score = 102 bits (253), Expect = 2e-20 Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 4/107 (3%) Frame = +1
Query: 220 DSCSVCGSGDKLTFCYTCPEAYHPSCLTPPLKVAPRGRWSCPHCVDPMSEIDKFLDCQMR 399 D+C CG D L C TC A+H CL P L + +WSCP CV P++E++K LDC+ Sbjct: 37 DACQKCGENDNLVPCSTCTYAFHRKCLVPRLNITS-DKWSCPECVSPLTEMEKILDCEET 95
Query: 400 PQENLEETDE----SKESLTRQYLVKWKSRSYLHCSWLPETELEKAA 528 + EET SK+ ++YL+KWK S+LHC+W+ E+E + A Sbjct: 96 KPDASEETSSSESGSKKKPVKRYLIKWKGISHLHCTWVSESEYLETA 142
>tr|B3NID0|B3NID0_DROER GG16034 OS=Drosophila erecta GN=Chd3 PE=4 SV=1 Length = 869
Score = 93.6 bits (231), Expect = 7e-18 Identities = 39/97 (40%), Positives = 52/97 (53%) Frame = +1
Query: 226 CSVCGSGDKLTFCYTCPEAYHPSCLTPPLKVAPRGRWSCPHCVDPMSEIDKFLDCQMRPQ 405 C VC G L C +CP YH +CLTPPLK P+G W CP C+ + +K L R Sbjct: 11 CRVCRDGGDLLCCDSCPSVYHRTCLTPPLKSIPKGDWICPRCIPLPGKAEKIL--SWRWT 68
Query: 406 ENLEETDESKESLTRQYLVKWKSRSYLHCSWLPETEL 516 T S + R+Y +KW +SY HC W+PE ++ Sbjct: 69 LGRRSTSRSSQGAVREYFIKWYDKSYWHCEWIPEGQM 105
>tr|Q59E34|Q59E34_DROME Mi-2, isoform B OS=Drosophila melanogaster GN=Mi-2 PE=2 SV=1 Length = 1983
Score = 87.8 bits (216), Expect = 4e-16 Identities = 40/105 (38%), Positives = 54/105 (51%), Gaps = 7/105 (6%) Frame = +1
Query: 226 CSVCGSGDKLTFCYTCPEAYHPSCLTPPLKVAPRGRWSCPHCVDP--MSEIDKFLDCQMR 399 C VC G +L C +CP AYH CL PPL P G W CP C P + +K + + Sbjct: 441 CRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCSCPPLTGKAEKIITWRWA 500
Query: 400 PQENLEETDESK-----ESLTRQYLVKWKSRSYLHCSWLPETELE 519 + N + SK S R+Y +KW + SY HC W+PE +L+ Sbjct: 501 QRSNDDGPSTSKGSKNSNSRVREYFIKWHNMSYWHCEWVPEVQLD 545
Score = 63.5 bits (153), Expect = 7e-09 Identities = 24/44 (54%), Positives = 27/44 (61%) Frame = +1
Query: 220 DSCSVCGSGDKLTFCYTCPEAYHPSCLTPPLKVAPRGRWSCPHC 351 D C VC G ++ C TCP AYH CL P L P G+WSCPHC Sbjct: 379 DYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHC 422
>tr|B4PFW6|B4PFW6_DROYA GE22457 OS=Drosophila yakuba GN=Dyak\GE22457 PE=4 SV=1 Length = 1982
Score = 87.8 bits (216), Expect = 4e-16 Identities = 39/105 (37%), Positives = 54/105 (51%), Gaps = 7/105 (6%) Frame = +1
Query: 226 CSVCGSGDKLTFCYTCPEAYHPSCLTPPLKVAPRGRWSCPHCVDP--MSEIDKFLDCQMR 399 C VC G +L C +CP AYH CL PPL P G W CP C P + +K + + Sbjct: 440 CRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCSCPPLTGKAEKIITWRWA 499
Query: 400 PQEN-----LEETDESKESLTRQYLVKWKSRSYLHCSWLPETELE 519 + N + +S S R+Y +KW + SY HC W+PE +L+ Sbjct: 500 QRSNDDGPSTSKGSKSSNSRVREYFIKWHNMSYWHCEWVPEVQLD 544
Score = 63.5 bits (153), Expect = 7e-09 Identities = 24/44 (54%), Positives = 27/44 (61%) Frame = +1
Query: 220 DSCSVCGSGDKLTFCYTCPEAYHPSCLTPPLKVAPRGRWSCPHC 351 D C VC G ++ C TCP AYH CL P L P G+WSCPHC Sbjct: 378 DYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHC 421
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