BP912917
Clone id YMU001_000024_C10
Library
Length 533
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000024_C10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGAGAACTCTCATCCATCAGTTGATAAATCGATGAGGTGAACTTACAAAATGTCTAATTT
ACTCCGGAAGATTTTCCTGCAATGATACATTTGACTCCTGGAGGTGAGCCCTAGAGCTCA
AGAAGCCATAGCGCACATTACAAATTGCCATGGGGATCATGTCTATACTCCTGTATCCCT
ACTATGTACAAGCCTCTCGCCAGCTCCAAATACTCTCTTCTTCCTTTGTAGCACGAAGTG
ATGCGATCCCCGGTAATATATGTACAGAACAACGACCCACCAAAACTAGTTCAATAGCGA
ACTAGTAAGCTATACCACCACTGATGCCATCACCATCATGGCGAAGGCTTTGAGTTAACC
AATAGCCATCCCAGCAGCCACCAACTCTCTGCAACAGAGTGAACTCGAAAATCTCCTCTT
CATTCGGACGTGCCCCCATAACCCACACCCTTTGCTTGAAACAATGCTCGTTAACATATA
AGCTGCTCAGAGTCTGTGCTTCCTTATGACCAAGGAGTACCCGATAGGTGGAA
■■Homology search results ■■ -
sp_hit_id Q2S3W3
Definition sp|Q2S3W3|SYR_SALRD Arginyl-tRNA synthetase OS=Salinibacter ruber (strain DSM 13855)
Align length 29
Score (bit) 30.4
E-value 5.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912917|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_C10.
(533 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q2S3W3|SYR_SALRD Arginyl-tRNA synthetase OS=Salinibacter rube... 30 5.6
sp|Q9DBE8|ALG2_MOUSE Alpha-1,3-mannosyltransferase ALG2 OS=Mus m... 30 9.5

>sp|Q2S3W3|SYR_SALRD Arginyl-tRNA synthetase OS=Salinibacter ruber
(strain DSM 13855) GN=argS PE=3 SV=1
Length = 562

Score = 30.4 bits (67), Expect = 5.6
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3

Query: 180 YYVQASRQLQILSSSFVARSDAIPGNICT 266
YY A RQ+++L+ S AR +A+ GN+ T
Sbjct: 162 YYNDAGRQMRVLAQSVRARYEALAGNVPT 190


>sp|Q9DBE8|ALG2_MOUSE Alpha-1,3-mannosyltransferase ALG2 OS=Mus
musculus GN=Alg2 PE=2 SV=2
Length = 415

Score = 29.6 bits (65), Expect = 9.5
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1

Query: 121 RSHSAHYKLPWGSCLYSCIPTMYKPLASSKYSLLPL*HEVMRSPVIYVQNNDP 279
RS S K+ S L+ C+ +Y P ++ + ++PL M+ PVI V N P
Sbjct: 301 RSFSDRQKI---SLLHGCLCVLYTP-SNEHFGIVPLEAMYMQCPVIAVNNGGP 349


tr_hit_id A9T6I0
Definition tr|A9T6I0|A9T6I0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 76
Score (bit) 127.0
E-value 4.0e-28
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912917|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_C10.
(533 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9T6I0|A9T6I0_PHYPA Predicted protein OS=Physcomitrella paten... 127 4e-28
tr|B6THC8|B6THC8_MAIZE Putative uncharacterized protein OS=Zea m... 125 2e-27
tr|Q6NM03|Q6NM03_ARATH At2g25605 (Putative uncharacterized prote... 122 2e-26
tr|A7P5K4|A7P5K4_VITVI Chromosome chr4 scaffold_6, whole genome ... 120 6e-26
tr|Q0DFR7|Q0DFR7_ORYSJ Os05g0574700 protein OS=Oryza sativa subs... 114 2e-24
tr|B8AWV6|B8AWV6_ORYSI Putative uncharacterized protein OS=Oryza... 114 2e-24
tr|A5BJE9|A5BJE9_VITVI Putative uncharacterized protein OS=Vitis... 102 9e-21
tr|A3B727|A3B727_ORYSJ Putative uncharacterized protein OS=Oryza... 77 4e-13
tr|A8JI05|A8JI05_CHLRE Predicted protein OS=Chlamydomonas reinha... 51 3e-05
tr|Q7N5Y6|Q7N5Y6_PHOLL Similar to unknown protein OS=Photorhabdu... 35 2.4
tr|Q3L9Z7|Q3L9Z7_RHOE4 Hypothetical membrane protein OS=Rhodococ... 34 4.1
tr|Q7U2J4|Q7U2J4_MYCBO PROBABLE CONSERVED TRANSMEMBRANE PROTEIN ... 34 5.4
tr|P96401|P96401_MYCTU PROBABLE CONSERVED TRANSMEMBRANE PROTEIN ... 34 5.4
tr|A5TYU4|A5TYU4_MYCTA Putative conserved transmembrane protein ... 34 5.4
tr|A1KF39|A1KF39_MYCBP Probable conserved transmembrane protein ... 34 5.4
tr|A4KNP0|A4KNP0_MYCTU Conserved transmembrane protein OS=Mycoba... 34 5.4
tr|A2VND9|A2VND9_MYCTU Putative uncharacterized protein OS=Mycob... 34 5.4
tr|A1QMZ6|A1QMZ6_MYCTF Putative uncharacterized protein (Conserv... 34 5.4
tr|A8RFI9|A8RFI9_9FIRM Putative uncharacterized protein OS=Eubac... 33 7.0
tr|O29801|O29801_ARCFU Signal-transducing histidine kinase, puta... 33 7.0

>tr|A9T6I0|A9T6I0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_219361 PE=4 SV=1
Length = 230

Score = 127 bits (319), Expect = 4e-28
Identities = 56/76 (73%), Positives = 67/76 (88%)
Frame = -2

Query: 532 STYRVLLGHKEAQTLSSLYVNEHCFKQRVWVMGARPNEEEIFEFTLLQRVGGCWDGYWLT 353
+++RVLL H + + LSSL+VNEHCFKQRV ++GARP EEEI+EFTL QR+GG WDGYWLT
Sbjct: 155 TSFRVLLNHTDRRILSSLFVNEHCFKQRVCIVGARPGEEEIYEFTLAQRIGGNWDGYWLT 214

Query: 352 QSLRHDGDGISGGIAY 305
QSLRHDG+G SGGIAY
Sbjct: 215 QSLRHDGEGASGGIAY 230


>tr|B6THC8|B6THC8_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 211

Score = 125 bits (313), Expect = 2e-27
Identities = 57/76 (75%), Positives = 66/76 (86%)
Frame = -2

Query: 532 STYRVLLGHKEAQTLSSLYVNEHCFKQRVWVMGARPNEEEIFEFTLLQRVGGCWDGYWLT 353
STYRVLLGH+E + LSSL+V E+ FKQRVWV GARP EEEIF+FT++QRVGG WDGYWLT
Sbjct: 136 STYRVLLGHRERRILSSLWVEENQFKQRVWVQGARPEEEEIFQFTMVQRVGGSWDGYWLT 195

Query: 352 QSLRHDGDGISGGIAY 305
+SL +DGD SGGIAY
Sbjct: 196 ESLINDGDAFSGGIAY 211


>tr|Q6NM03|Q6NM03_ARATH At2g25605 (Putative uncharacterized protein)
OS=Arabidopsis thaliana GN=At2g25605 PE=2 SV=1
Length = 200

Score = 122 bits (305), Expect = 2e-26
Identities = 53/76 (69%), Positives = 64/76 (84%)
Frame = -2

Query: 532 STYRVLLGHKEAQTLSSLYVNEHCFKQRVWVMGARPNEEEIFEFTLLQRVGGCWDGYWLT 353
S+YRVLLGHK+ + LSSL+V E+ FKQR+W+ G RP EEEIFEFT+ QR+GG WDGYWLT
Sbjct: 125 SSYRVLLGHKDRKLLSSLFVEENRFKQRIWIQGNRPEEEEIFEFTMFQRIGGSWDGYWLT 184

Query: 352 QSLRHDGDGISGGIAY 305
+SL HDGD SGG+AY
Sbjct: 185 ESLLHDGDVFSGGMAY 200


>tr|A7P5K4|A7P5K4_VITVI Chromosome chr4 scaffold_6, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00032568001
PE=4 SV=1
Length = 200

Score = 120 bits (300), Expect = 6e-26
Identities = 53/76 (69%), Positives = 63/76 (82%)
Frame = -2

Query: 532 STYRVLLGHKEAQTLSSLYVNEHCFKQRVWVMGARPNEEEIFEFTLLQRVGGCWDGYWLT 353
S+YRVLL H+E + LSSL+V E+ FKQRVW+ G RP EEEIF+FT+ QRVGG WDGYWLT
Sbjct: 125 SSYRVLLCHRERKILSSLWVKENRFKQRVWIRGTRPEEEEIFQFTMFQRVGGSWDGYWLT 184

Query: 352 QSLRHDGDGISGGIAY 305
+SL HDGD SGG+AY
Sbjct: 185 ESLLHDGDSFSGGVAY 200


>tr|Q0DFR7|Q0DFR7_ORYSJ Os05g0574700 protein OS=Oryza sativa subsp.
japonica GN=Os05g0574700 PE=2 SV=1
Length = 218

Score = 114 bits (286), Expect = 2e-24
Identities = 53/77 (68%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
Frame = -2

Query: 532 STYRVLLGHKEAQTLSSLYVNEHCFKQRVWVMGARPNEEEIFEFTLLQRVGGCWDGYWLT 353
STYRVLL HKE LSSL+V E+ +KQRVWV G+RP EE IF+FT++QRVGG WDGYWLT
Sbjct: 142 STYRVLLAHKERTILSSLWVEENLYKQRVWVRGSRPEEEAIFQFTMVQRVGGSWDGYWLT 201

Query: 352 QSL-RHDGDGISGGIAY 305
+SL DGD +SGG+AY
Sbjct: 202 ESLINDDGDALSGGLAY 218


>tr|B8AWV6|B8AWV6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_21087 PE=4 SV=1
Length = 215

Score = 114 bits (286), Expect = 2e-24
Identities = 53/77 (68%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
Frame = -2

Query: 532 STYRVLLGHKEAQTLSSLYVNEHCFKQRVWVMGARPNEEEIFEFTLLQRVGGCWDGYWLT 353
STYRVLL HKE LSSL+V E+ +KQRVWV G+RP EE IF+FT++QRVGG WDGYWLT
Sbjct: 139 STYRVLLAHKERTILSSLWVEENLYKQRVWVRGSRPEEEAIFQFTMVQRVGGSWDGYWLT 198

Query: 352 QSL-RHDGDGISGGIAY 305
+SL DGD +SGG+AY
Sbjct: 199 ESLINDDGDALSGGLAY 215


>tr|A5BJE9|A5BJE9_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_004444 PE=4 SV=1
Length = 166

Score = 102 bits (255), Expect = 9e-21
Identities = 49/76 (64%), Positives = 59/76 (77%)
Frame = -2

Query: 532 STYRVLLGHKEAQTLSSLYVNEHCFKQRVWVMGARPNEEEIFEFTLLQRVGGCWDGYWLT 353
S+YRVLL H+E + LSSL+V E+ FKQRVW+ G RP EEEIF+FT+ V WDGYWLT
Sbjct: 93 SSYRVLLCHRERKILSSLWVKENRFKQRVWIRGTRPEEEEIFQFTIGLVVP--WDGYWLT 150

Query: 352 QSLRHDGDGISGGIAY 305
+SL HDGD SGG+AY
Sbjct: 151 ESLLHDGDSFSGGVAY 166


>tr|A3B727|A3B727_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_018849 PE=4 SV=1
Length = 269

Score = 77.4 bits (189), Expect = 4e-13
Identities = 33/53 (62%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
Frame = -2

Query: 475 VNEHCFKQRVWVMGARPNEEEIFEFTLLQRVGGCWDGYWLTQSL-RHDGDGIS 320
+ ++ +KQRVWV G+RP EE IF+FT++QRVGG WDGYWLT+SL DGD +S
Sbjct: 172 LGQNLYKQRVWVRGSRPEEEAIFQFTMVQRVGGSWDGYWLTESLINDDGDALS 224


>tr|A8JI05|A8JI05_CHLRE Predicted protein OS=Chlamydomonas
reinhardtii GN=CHLREDRAFT_180553 PE=4 SV=1
Length = 169

Score = 51.2 bits (121), Expect = 3e-05
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = -2

Query: 526 YRVLLGHKEAQTLSSLYVNEHCFKQRVWVMGARPNEEEIFEFTLLQRVGGCWDGYWLTQS 347
+ LL + + LS+L ++E C+ RV V EE + TL QR+GGC+DGYW T
Sbjct: 96 HATLLDNSGWEVLSTLQLSETCWCARVRVWDTHRLEERAYAITLTQRLGGCYDGYWYTDR 155

Query: 346 LRHDGDGIS 320
+G ++
Sbjct: 156 WVCEGQDVN 164


>tr|Q7N5Y6|Q7N5Y6_PHOLL Similar to unknown protein OS=Photorhabdus
luminescens subsp. laumondii GN=plu1793 PE=4 SV=1
Length = 452

Score = 35.0 bits (79), Expect = 2.4
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 10/74 (13%)
Frame = -2

Query: 526 YRVLLGHKEAQTLSSLYVNEHCF---KQRVWVMGARPNEEEIFEFTLLQRVGGCWD---- 368
+ ++G + L NE C Q++W+ R ++E F+F +R GG W
Sbjct: 350 FNYVVGIQNLIELKGWSANEDCALKRAQQLWLDPYRCQQDETFKF---EREGGDWKKEIA 406

Query: 367 ---GYWLTQSLRHD 335
YWL QSL+H+
Sbjct: 407 ADFSYWLNQSLKHE 420