BP912920
Clone id YMU001_000024_D02
Library
Length 211
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000024_D02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CTGCTGTCAAATTGCCCCTTCATCCCCACCGCGTCGAGGGTTCCACAGGCAGCATTGAAG
ATCGACGTCTATGCCAACATCACAACATTAAATTCAGCTCCATTGCTGATAGAGGTGCAG
ATGATAAGACGGCCGCGCACATGCTTACATCGTCCGATTCCTCCTCCTGCTTGATATCTA
CTGCTAACAAGTCGCTTGATATCTTCCGCCA
■■Homology search results ■■ -
sp_hit_id O13810
Definition sp|O13810|PROB_SCHPO Probable glutamate 5-kinase OS=Schizosaccharomyces pombe
Align length 41
Score (bit) 29.6
E-value 5.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912920|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_D02.
(188 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O13810|PROB_SCHPO Probable glutamate 5-kinase OS=Schizosaccha... 30 5.0
sp|Q2NEW2|RLA0_METST Acidic ribosomal protein P0 homolog OS=Meth... 29 6.5

>sp|O13810|PROB_SCHPO Probable glutamate 5-kinase
OS=Schizosaccharomyces pombe GN=SPAC17H9.13c PE=2 SV=1
Length = 402

Score = 29.6 bits (65), Expect = 5.0
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +3

Query: 3 AVKLPLHPHRVEGSTGSIEDRRLCQHHNIKF--SSIADRGA 119
+V+LPLH H V G I DR H +K S DRGA
Sbjct: 264 SVELPLHTHFVAKKQGRIRDRHFWLLHGLKSHGSLEIDRGA 304


>sp|Q2NEW2|RLA0_METST Acidic ribosomal protein P0 homolog
OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rplP0
PE=3 SV=1
Length = 332

Score = 29.3 bits (64), Expect = 6.5
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1

Query: 22 IPTASRVPQAALKIDVYANITTLNSAPLLIE 114
I T + Q+A+ + VYA I SAPLLI+
Sbjct: 209 IQTLANAYQSAINLSVYAGILNSESAPLLIQ 239


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912920|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_D02.
(188 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******