BP912923
Clone id YMU001_000024_D06
Library
Length 460
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000024_D06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TAGCCCAAAGAAATTAATGCTAATGACAACATGAAAAAGCACAGTGACTATTGCACTGGA
TTGTATTATATAGCACGCAGGGTAGAGGTGAACTTGTAGCTCAACAATGAAGCCCGGACT
GTACATCTCAAATCAGTTGTTACTCTGATATTGATCCCCTCGATCTAAACCTTCCCGCCA
ATTACAACTAAAAAACCTGCTTATAATTCCAAAATCTTATACAGCAGCTCAGTGTGTTGC
AAGCAATCGGCAACCTCAGCAATCTGTCGAACTTTTGATGAAAGAATCTCTTGAAACTCC
TTTGCCTGCTCTTGGTATGATTGATTGGTCAGTCTGCCACACCGCGGTACACTGAAACCT
CTGATCATTCTCCGTTTATTAGAAGACATATCAGAAACCATTGAGTCACACAAACTGGGT
GCCTGAATATGATGCTTTTTGCTCTTTGTAGCACCACATG
■■Homology search results ■■ -
sp_hit_id Q96FJ0
Definition sp|Q96FJ0|STALP_HUMAN AMSH-like protease OS=Homo sapiens
Align length 50
Score (bit) 30.4
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912923|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_D06.
(460 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q96FJ0|STALP_HUMAN AMSH-like protease OS=Homo sapiens GN=STAM... 30 3.8
sp|Q5R558|STALP_PONAB AMSH-like protease OS=Pongo abelii GN=STAM... 30 5.0
sp|Q55DJ8|IRLC_DICDI Probable serine/threonine-protein kinase ir... 29 8.6

>sp|Q96FJ0|STALP_HUMAN AMSH-like protease OS=Homo sapiens
GN=STAMBPL1 PE=1 SV=2
Length = 436

Score = 30.4 bits (67), Expect = 3.8
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -3

Query: 371 RMIRGFSVPRCGRLTNQSYQEQAKEFQEILSSKVRQIAEVADCLQHTELL 222
+ ++ + PR L N ++ E+QE L SK + AE+ L+H L+
Sbjct: 108 KKLKEIAFPRTDELKNDLLKKYNVEYQEYLQSKNKYKAEILKKLEHQRLI 157


>sp|Q5R558|STALP_PONAB AMSH-like protease OS=Pongo abelii
GN=STAMBPL1 PE=2 SV=1
Length = 436

Score = 30.0 bits (66), Expect = 5.0
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -3

Query: 371 RMIRGFSVPRCGRLTNQSYQEQAKEFQEILSSKVRQIAEVADCLQHTELL 222
+ ++ + PR L N ++ E+QE L SK + AE+ L+H L+
Sbjct: 108 KKLKEIAFPRTDELKNDLLKKYNVEYQEYLQSKNQYKAEILKKLEHQRLI 157


>sp|Q55DJ8|IRLC_DICDI Probable serine/threonine-protein kinase irlC
OS=Dictyostelium discoideum GN=irlC PE=3 SV=1
Length = 1444

Score = 29.3 bits (64), Expect = 8.6
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = -3

Query: 404 SMVSDMSSNKRRMIRGFS----VPRCGRLTNQSYQEQAKEFQEILSSKVRQIAEVADCLQ 237
+ ++ + +NK+ +I F + RC R T Q ++E + ++ SS EV DCL+
Sbjct: 1343 NQLNGVGNNKKVIIYSFDQVKDLVRCIRNTIQHHKEIQRLVRQSPSSNGDNKQEVLDCLE 1402

Query: 236 HTELLYKILE 207
EL+ E
Sbjct: 1403 SQELVLSYFE 1412


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912923|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_D06.
(460 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******