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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912924
Clone id YMU001_000024_D07
Library
Length 451
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000024_D07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GTAGAAGTTGTGCAATTGTATATGAGCAGGTTCCTGTTGTCAGCATACAAGGAGTAGCTA
TGCCGAATGTCTTGCGGGATGGTGGCACTGGGGTAAATGTGCTATCAAAAGTGCTTTGTG
CGTAGTCTAGTGTTAAGGAGCTTGAGCCAACACCATTTGTAGTAAAGATAGCTGACCAAA
GAAGAATACAACCACTGGGCCTTGTTTTAAACATCTAGAGGTTCAAATAGCTTGCATGCT
GTTCATCAATGCGGCTGTAGAATGGAGGACATCAGTGGAGCCTATCAATTGTTACTGGAA
AGGCCTTGGATTCAACAAGCTAGGGCAAAGCAAAATTGGGCAGTGAACACATTGAGAATC
CAAAAGGCAAACGCAAGATAAAGGTTAGTGTGCATGCCATCAAAATGTGGCACCTAGTGT
GGCCAAAGTATGCTGAGGGAGTATACCTGGA
■■Homology search results ■■ -
sp_hit_id Q8LKZ1
Definition sp|Q8LKZ1|NORK_PEA Nodulation receptor kinase OS=Pisum sativum
Align length 45
Score (bit) 29.6
E-value 6.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912924|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_D07.
         (451 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8LKZ1|NORK_PEA Nodulation receptor kinase OS=Pisum sativum G...    30   6.3  
sp|Q5R6S2|DIRA2_PONAB GTP-binding protein Di-Ras2 OS=Pongo abeli...    29   8.2  
sp|Q5PR73|DIRA2_MOUSE GTP-binding protein Di-Ras2 OS=Mus musculu...    29   8.2  
sp|Q95KD9|DIRA2_MACFA GTP-binding protein Di-Ras2 OS=Macaca fasc...    29   8.2  
sp|Q96HU8|DIRA2_HUMAN GTP-binding protein Di-Ras2 OS=Homo sapien...    29   8.2  
sp|Q91Z61|DIRA1_MOUSE GTP-binding protein Di-Ras1 OS=Mus musculu...    29   8.2  
sp|O95057|DIRA1_HUMAN GTP-binding protein Di-Ras1 OS=Homo sapien...    29   8.2  
sp|Q6PAL7|AHDC1_MOUSE A.T hook DNA-binding motif-containing prot...    29   8.2  

>sp|Q8LKZ1|NORK_PEA Nodulation receptor kinase OS=Pisum sativum
           GN=NORK PE=1 SV=1
          Length = 924

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +1

Query: 184 EYNHWALF*TSRGSNSLHAVHQCGCRMEDISGAYQLLLERPWIQQ 318
           +Y++  L  ++ GS ++  V   G +   +  AY++L  RPWI +
Sbjct: 310 KYSYTVLNISANGSLNITLVKASGSKFGPLLNAYEILQARPWIDE 354


>sp|Q5R6S2|DIRA2_PONAB GTP-binding protein Di-Ras2 OS=Pongo abelii
           GN=DIRAS2 PE=2 SV=1
          Length = 199

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 172 AIFTTNGVGSSSLTLDYAQSTFDSTFTP 89
           A+F   GVG SSL L + + TF  ++ P
Sbjct: 11  AVFGAGGVGKSSLVLRFVKGTFRESYIP 38


>sp|Q5PR73|DIRA2_MOUSE GTP-binding protein Di-Ras2 OS=Mus musculus
           GN=Diras2 PE=2 SV=1
          Length = 199

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 172 AIFTTNGVGSSSLTLDYAQSTFDSTFTP 89
           A+F   GVG SSL L + + TF  ++ P
Sbjct: 11  AVFGAGGVGKSSLVLRFVKGTFRESYIP 38


>sp|Q95KD9|DIRA2_MACFA GTP-binding protein Di-Ras2 OS=Macaca
           fascicularis GN=DIRAS2 PE=2 SV=1
          Length = 199

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 172 AIFTTNGVGSSSLTLDYAQSTFDSTFTP 89
           A+F   GVG SSL L + + TF  ++ P
Sbjct: 11  AVFGAGGVGKSSLVLRFVKGTFRESYIP 38


>sp|Q96HU8|DIRA2_HUMAN GTP-binding protein Di-Ras2 OS=Homo sapiens
           GN=DIRAS2 PE=1 SV=1
          Length = 199

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 172 AIFTTNGVGSSSLTLDYAQSTFDSTFTP 89
           A+F   GVG SSL L + + TF  ++ P
Sbjct: 11  AVFGAGGVGKSSLVLRFVKGTFRESYIP 38


>sp|Q91Z61|DIRA1_MOUSE GTP-binding protein Di-Ras1 OS=Mus musculus
           GN=Diras1 PE=2 SV=1
          Length = 198

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -1

Query: 169 IFTTNGVGSSSLTLDYAQSTFDSTFTP 89
           +F   GVG SSL L + + TF  T+ P
Sbjct: 12  VFGAGGVGKSSLVLRFVKGTFRDTYIP 38


>sp|O95057|DIRA1_HUMAN GTP-binding protein Di-Ras1 OS=Homo sapiens
           GN=DIRAS1 PE=1 SV=1
          Length = 198

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -1

Query: 169 IFTTNGVGSSSLTLDYAQSTFDSTFTP 89
           +F   GVG SSL L + + TF  T+ P
Sbjct: 12  VFGAGGVGKSSLVLRFVKGTFRDTYIP 38


>sp|Q6PAL7|AHDC1_MOUSE A.T hook DNA-binding motif-containing protein 1
            OS=Mus musculus GN=Ahdc1 PE=1 SV=1
          Length = 1594

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = -1

Query: 172  AIFTTNGVGSSSLTLDYAQSTFDSTFTPVPPSRKTF--GIATPCMLTTGTCSYTIAQ 8
            A F + G  +S + +  + +  D +F PV PSR+TF  G AT   +T  T     A+
Sbjct: 882  ATFPSRGAKASPVAVGSSGAGADPSFQPVLPSRQTFPPGRATSYGITPATSDCRAAE 938
tr_hit_id A9REB0
Definition tr|A9REB0|A9REB0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 59
Score (bit) 36.2
E-value 0.85
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912924|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_D07.
         (451 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9REB0|A9REB0_PHYPA Predicted protein OS=Physcomitrella paten...    36   0.85 
tr|A9RN68|A9RN68_PHYPA Predicted protein OS=Physcomitrella paten...    35   1.9  
tr|B6KKM5|B6KKM5_TOXGO Vacuolar protein sorting 18, putative OS=...    35   2.5  
tr|A5BNP2|A5BNP2_VITVI Putative uncharacterized protein OS=Vitis...    27   6.8  
tr|A9REQ8|A9REQ8_PHYPA Predicted protein OS=Physcomitrella paten...    33   7.1  
tr|A9RE89|A9RE89_PHYPA Predicted protein OS=Physcomitrella paten...    33   7.1  
tr|A5C8Y0|A5C8Y0_VITVI Putative uncharacterized protein OS=Vitis...    33   7.2  
tr|Q8L6A4|Q8L6A4_9FABA Nodulation receptor kinase OS=Vicia hirsu...    33   9.3  
tr|Q8IFX6|Q8IFX6_CAEEL Putative uncharacterized protein OS=Caeno...    33   9.3  
tr|Q7YZW4|Q7YZW4_CAEEL Putative uncharacterized protein OS=Caeno...    33   9.3  
tr|P91365|P91365_CAEEL Putative uncharacterized protein OS=Caeno...    33   9.3  
tr|A5C8Q1|A5C8Q1_VITVI Putative uncharacterized protein OS=Vitis...    33   9.4  
tr|A5C468|A5C468_VITVI Putative uncharacterized protein OS=Vitis...    33   9.4  
tr|A5AS28|A5AS28_VITVI Putative uncharacterized protein OS=Vitis...    33   9.4  

>tr|A9REB0|A9REB0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_64990 PE=4 SV=1
          Length = 494

 Score = 36.2 bits (82), Expect = 0.85
 Identities = 17/59 (28%), Positives = 36/59 (61%)
 Frame = +3

Query: 39  VSIQGVAMPNVLRDGGTGVNVLSKVLCA*SSVKELEPTPFVVKIADQRRIQPLGLVLNI 215
           VSI G+ + +V  DGG+ VN+++  +     ++ L P   V+++AD   I+P+ ++ ++
Sbjct: 428 VSIDGIMISDVQVDGGSNVNLMNVDIMDALDLEHLVPMTLVLRMADHSWIKPMDILWSV 486


>tr|A9RN68|A9RN68_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_68351 PE=4 SV=1
          Length = 276

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = +1

Query: 280 AYQLLLERPWIQQARAKQNWAVNTLRIQK 366
           +Y +LL R W+ QA+AK +W+  TL I+K
Sbjct: 161 SYPILLGRLWLYQAKAKNDWSQGTLTIEK 189


>tr|B6KKM5|B6KKM5_TOXGO Vacuolar protein sorting 18, putative
           OS=Toxoplasma gondii ME49 GN=TGME49_089730 PE=4 SV=1
          Length = 1157

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = -1

Query: 169 IFTTNGVGSSSLTLDYAQSTFDSTFTPVPPSRKTFGIATPCMLT 38
           +F T G+G  S TL  + S+ D   +P+PP+R  F   +P +++
Sbjct: 267 VFWTTGIGIVSSTLCLSSSSADGASSPLPPARAFFSSESPVVIS 310


>tr|A5BNP2|A5BNP2_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_042499 PE=4 SV=1
          Length = 2112

 Score = 26.6 bits (57), Expect(2) = 6.8
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 280 AYQLLLERPWIQQARA 327
           ++ LLL RPWI +ARA
Sbjct: 321 SFNLLLSRPWIHRARA 336



 Score = 25.4 bits (54), Expect(2) = 6.8
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = +3

Query: 39  VSIQGVAMPNVLRDGGTGVNV--LSKVLCA*SSVKELEPTPFVVKIADQRRIQPLG 200
           V   G  +P+VL D G+ +NV  L+  +    +  +  P+  +V+  D  R + +G
Sbjct: 241 VGCSGRRVPSVLLDNGSALNVCPLATAIALGYAPSDFGPSTQIVRAYDSTRREVMG 296


>tr|A9REQ8|A9REQ8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_65152 PE=4 SV=1
          Length = 159

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +1

Query: 268 DISGAYQLLLERPWIQQARAKQNWAVNTLRIQKANAR*RLVCM 396
           D +G Y ++L RPW+ +  A  NW    L+I     R R+  M
Sbjct: 35  DSTGRYLVILGRPWLTEVNAVNNWKPGKLKIGPRRNRVRIRVM 77


>tr|A9RE89|A9RE89_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_64957 PE=4 SV=1
          Length = 939

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +1

Query: 280 AYQLLLERPWIQQARAKQNWAVNTLRIQK 366
           +Y +LL RPW+  A+A  +W   TL I+K
Sbjct: 773 SYPILLVRPWLFHAKAHNDWGRRTLTIEK 801


>tr|A5C8Y0|A5C8Y0_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_001293 PE=4 SV=1
          Length = 133

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = +3

Query: 45  IQGVAMPNVLRDGGTGVNVLSKVLCA*SSVKELEPTPFVVKIADQRRIQPLGLVLNI 215
           I GV+M   L D G  VN+L   +     + EL+PT   + +AD+    P G++ ++
Sbjct: 2   IGGVSMERALLDFGASVNLLPYFVYKQLGLGELKPTSITLSLADRSVTIPRGMIEDV 58


>tr|Q8L6A4|Q8L6A4_9FABA Nodulation receptor kinase OS=Vicia hirsuta
           GN=nork PE=2 SV=1
          Length = 923

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = +1

Query: 184 EYNHWALF*TSRGSNSLHAVHQCGCRMEDISGAYQLLLERPWIQQ 318
           +Y++ AL  T+ GS ++  V   G +   +  AY++L  RPWI +
Sbjct: 309 KYSYTALNITANGSLNMTLVKASGSKFGPLLNAYEILQARPWIDE 353


>tr|Q8IFX6|Q8IFX6_CAEEL Putative uncharacterized protein
           OS=Caenorhabditis elegans GN=K06A9.1 PE=1 SV=1
          Length = 2232

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = -1

Query: 205 TRPSGCILLWSAIFTTNGVGSSS--LTLDYAQSTFDSTFTPVPPSRKTFGIATP 50
           T PS      S + +T+G  SSS   T+     +  ST TPVP S  T G +TP
Sbjct: 285 TFPSSVASSPSTVGSTSGAASSSSYATVSTIAGSTGSTITPVPGSSSTIGSSTP 338


>tr|Q7YZW4|Q7YZW4_CAEEL Putative uncharacterized protein
           OS=Caenorhabditis elegans GN=K06A9.1 PE=1 SV=1
          Length = 825

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = -1

Query: 205 TRPSGCILLWSAIFTTNGVGSSS--LTLDYAQSTFDSTFTPVPPSRKTFGIATP 50
           T PS      S + +T+G  SSS   T+     +  ST TPVP S  T G +TP
Sbjct: 78  TFPSSVASSPSTVGSTSGAASSSSYATVSTIAGSTGSTITPVPGSSSTIGSSTP 131