BP912928
Clone id YMU001_000024_D11
Library
Length 498
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000024_D11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTTTTTTTTTTTTTTTTCCACAACACACACTTTAATTGAAGAGAACTGCAATTCTTGCT
TACAAAGAACTCTTGACTAAGTTATGGTGGCGATATTCTGTAACAACCATTCCCTACAAT
ATACCAGTGTTCTCCACATCACATGGAAAGACAACAAAATTGCCTTCAGGGCTAATACAA
AGTCTTCACGATGGTTGTGTACTAACTCAGAACCGTTTTCCCTAAACAAAGCCTTAATGT
AGCCAGAATAACCACACAAGAGCATCTTAAACTGACATAACTTAGCATAAAAAATAAACA
TGTAGACGTAATCTAGCTTGTGCTTTTGATCTCCACCTATTTGTAATCCAATGTCACCAA
CATCCCCCTTAGGCACGCACATACTGTGAAATCCTAAGTTGCTCAATTTGAACTAAACAA
GTAAGCAGGTGCCTCACACTGTTGCGTGTAGTGCTTGACTCTTGGCCTAGCTCGCTTCTT
CTACAACACTTTGTACAC
■■Homology search results ■■ -
sp_hit_id Q9YEA0
Definition sp|Q9YEA0|VATI_AERPE V-type ATP synthase subunit I OS=Aeropyrum pernix
Align length 39
Score (bit) 31.6
E-value 2.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912928|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_D11.
(480 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9YEA0|VATI_AERPE V-type ATP synthase subunit I OS=Aeropyrum ... 32 2.0

>sp|Q9YEA0|VATI_AERPE V-type ATP synthase subunit I OS=Aeropyrum
pernix GN=atpI PE=3 SV=2
Length = 685

Score = 31.6 bits (70), Expect = 2.0
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +1

Query: 55 LTKLWWRYSVTTIPYNIPVFSTSHGKTTKLPSGLIQSLH 171
L +LW+R + T PY +P ++ HG+ +P + ++L+
Sbjct: 423 LPELWYRLGLETPPYAMPTYAIDHGEEELVPVLVYRALN 461


tr_hit_id Q8VGI2
Definition tr|Q8VGI2|Q8VGI2_MOUSE Olfactory receptor 376 OS=Mus musculus
Align length 104
Score (bit) 36.2
E-value 0.83
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912928|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_D11.
(480 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q8VGI2|Q8VGI2_MOUSE Olfactory receptor 376 OS=Mus musculus GN... 36 0.83
tr|B0QZP1|B0QZP1_MOUSE Olfactory receptor 376 (Fragment) OS=Mus ... 36 0.83
tr|B3ITM7|B3ITM7_MONDO Olfactory receptor (Fragment) OS=Monodelp... 35 2.4

>tr|Q8VGI2|Q8VGI2_MOUSE Olfactory receptor 376 OS=Mus musculus
GN=Olfr376 PE=3 SV=1
Length = 317

Score = 36.2 bits (82), Expect = 0.83
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 6/104 (5%)
Frame = -3

Query: 388 LSNLGFHSMCVPKGDVGDIGLQIGGDQKHKLDY------VYMFIFYAKLCQFKMLLCGYS 227
LSNL F +C + + LQ Q + Y +Y F+F+A L F ++ Y
Sbjct: 66 LSNLSFSDLCFSSVTMPKL-LQNMQSQDPSIPYAGCLAQMYFFLFFADLESFLLVAMAYD 124

Query: 226 GYIKALFRENGSELVHNHREDFVLALKAILLSFHVMWRTLVYCR 95
Y+ F + ++ ++ L +L +FH M TL+ R
Sbjct: 125 RYVAICFPLHYMSIMSPRLCVSLVLLSWVLTTFHAMLHTLLMAR 168


>tr|B0QZP1|B0QZP1_MOUSE Olfactory receptor 376 (Fragment) OS=Mus
musculus GN=Olfr376 PE=3 SV=1
Length = 249

Score = 36.2 bits (82), Expect = 0.83
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 6/104 (5%)
Frame = -3

Query: 388 LSNLGFHSMCVPKGDVGDIGLQIGGDQKHKLDY------VYMFIFYAKLCQFKMLLCGYS 227
LSNL F +C + + LQ Q + Y +Y F+F+A L F ++ Y
Sbjct: 66 LSNLSFSDLCFSSVTMPKL-LQNMQSQDPSIPYAGCLAQMYFFLFFADLESFLLVAMAYD 124

Query: 226 GYIKALFRENGSELVHNHREDFVLALKAILLSFHVMWRTLVYCR 95
Y+ F + ++ ++ L +L +FH M TL+ R
Sbjct: 125 RYVAICFPLHYMSIMSPRLCVSLVLLSWVLTTFHAMLHTLLMAR 168


>tr|B3ITM7|B3ITM7_MONDO Olfactory receptor (Fragment) OS=Monodelphis
domestica GN=opor52 PE=4 SV=1
Length = 216

Score = 34.7 bits (78), Expect = 2.4
Identities = 23/97 (23%), Positives = 45/97 (46%)
Frame = -3

Query: 385 SNLGFHSMCVPKGDVGDIGLQIGGDQKHKLDYVYMFIFYAKLCQFKMLLCGYSGYIKALF 206
S++ F S+ +PK V + L +Y F+F+A L F ++ Y Y+ +
Sbjct: 2 SDICFSSVTIPKLLVNMQSEKPAIPYPGCLAQMYFFLFFADLESFLLVAMAYDRYVAICY 61

Query: 205 RENGSELVHNHREDFVLALKAILLSFHVMWRTLVYCR 95
+ + ++ F++ L +L +FH + TL+ R
Sbjct: 62 PLHYTVIMSPKLCSFLVVLSWVLTTFHALLHTLLMSR 98