BP912931
Clone id YMU001_000024_E02
Library
Length 334
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000024_E02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AGATGGAGATCTGAGGGAGAAAGCTGCCTCCAACTGTCTCAACAGCAGGTCTAATTGCAT
AGGAATGGAGGAGACAGGTAATGATGGCGAAATCCAATAAATGTATCAGATGTGTGTGCA
AGTGGAAAAGATGGGAGGTATTTATGAAGGAGAGGAATATAACCGCATACCTATAGTGAA
TATAACTTTACGGCAATTCCCAGTGAAATTGAACTCTCTGTGAACTAACAGCTAGGCGGT
AAGACCTCGTGCCTGAAGGTTGATCCCACTTTTGTAGCACAAGAGGGCAGACATCTGTCT
TTAGGATGACGAGCCTCAACAAGCGCCTAGTGAA
■■Homology search results ■■ -
sp_hit_id Q8NH51
Definition sp|Q8NH51|OR8K3_HUMAN Olfactory receptor 8K3 OS=Homo sapiens
Align length 30
Score (bit) 30.0
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912931|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_E02.
(334 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8NH51|OR8K3_HUMAN Olfactory receptor 8K3 OS=Homo sapiens GN=... 30 3.8
sp|Q5UR03|YL905_MIMIV Uncharacterized protein L905 OS=Acanthamoe... 30 4.9
sp|P57094|AXN1_DANRE Axin-1 OS=Danio rerio GN=axin1 PE=1 SV=2 29 6.4

>sp|Q8NH51|OR8K3_HUMAN Olfactory receptor 8K3 OS=Homo sapiens
GN=OR8K3 PE=2 SV=1
Length = 312

Score = 30.0 bits (66), Expect = 3.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3

Query: 209 ISLGIAVKLYSL*VCGYIPLLHKYLPSFPL 120
ISL + +K+++L CGY + H Y S PL
Sbjct: 155 ISLLVTIKIFTLSFCGYNVISHFYCDSLPL 184


>sp|Q5UR03|YL905_MIMIV Uncharacterized protein L905 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_L905 PE=4 SV=1
Length = 210

Score = 29.6 bits (65), Expect = 4.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1

Query: 130 DGRYL*RRGI*PHTYSEYNFTAIPSEIELSV 222
D RY+ + GI P Y E N IP E +S+
Sbjct: 157 DARYIWKHGIPPRKYDEINGKKIPRETRISI 187


>sp|P57094|AXN1_DANRE Axin-1 OS=Danio rerio GN=axin1 PE=1 SV=2
Length = 835

Score = 29.3 bits (64), Expect = 6.4
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Frame = +2

Query: 2 DGDLREKAASNCLNSRSNCIGMEETGNDGEIQ*MYQM-------CVQVEKMGGIYEGEEY 160
+G LRE+ A L R + +EE G+D +I + V V+ GG Y Y
Sbjct: 400 EGVLREREAQEKLEERLKRVRLEEEGDDADISTGPSLANHRVPPAVHVQHYGGRYSEMSY 459

Query: 161 NRIPI 175
N + +
Sbjct: 460 NGLQL 464


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912931|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_E02.
(334 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******