BP912934
Clone id YMU001_000024_E05
Library
Length 516
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000024_E05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TCCCTAATACTCGTGTTGAAAATGGTCTAGAAAACAAATTTGACCAACATCTAGGGACTT
TGTCGTGACACATACTTGAATAGGGAGCACCAGTGCCAGTCCCAGAGACTCATATTCTCC
ACATGTGGAATATGTCTGAAAAGAACATCCTTCAAGTACAAGATGTACTTGTGCGTGGAG
GTAATTGCAACACTCTACAACGGGAGTGAGAGGGACCCTCATTAGCCTTGCTCCACACTG
GCTAAACCGAACTCCTTGAGTTCCTAGACCATGTTGCATCCCATGTGACAACATGTGCCA
AATAAACTCTACAAGTGGGTCTATAACTGCATAATGCAGAAACTTATTTTGGACACTATA
GCCCAAATGTCTTTGGCTCTTACATGACCTTGTCATCTCTCTAAAGAGCCAAAATGGATA
TGCATCCTACGTAGAAAAAACAAACCAAGAAGAAAGAAAACCGAAACAGATGCATACCTG
TAGTGGAGTGAAAAGCACCTACCCAAATTTCCCACC
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912934|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_E05.
(516 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A8I2U2
Definition tr|A8I2U2|A8I2U2_CHLRE Predicted protein OS=Chlamydomonas reinhardtii
Align length 90
Score (bit) 33.5
E-value 6.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912934|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_E05.
(516 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8I2U2|A8I2U2_CHLRE Predicted protein OS=Chlamydomonas reinha... 33 6.5

>tr|A8I2U2|A8I2U2_CHLRE Predicted protein OS=Chlamydomonas
reinhardtii GN=CHLREDRAFT_182126 PE=4 SV=1
Length = 117

Score = 33.5 bits (75), Expect = 6.5
Identities = 27/90 (30%), Positives = 34/90 (37%), Gaps = 4/90 (4%)
Frame = -1

Query: 327 VIDPLVEFIWHMLSHGMQHGLGTQGVRFSQCGAR---LMRVPLTPVVECCNYLHAQVHLV 157
V PL F L + G G +R AR + PL PV +C L LV
Sbjct: 16 VRQPLNRFASRSLGYEAAGGTGANALRAGATAARGGAYAKAPLVPVAQCSVCLEDAFCLV 75

Query: 156 LEGCSFQTYSTCG-EYESLGLALVLPIQVC 70
E C + +TC + AL L VC
Sbjct: 76 SEPCHHRLCATCSRDVTQRATALPLACVVC 105