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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912944
Clone id YMU001_000024_F06
Library
Length 340
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000024_F06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CCAGATAAAAGCAAGGGGAATAATGTTGATGTAGGTTCCCATGATGAAACGGAAGGCTGG
GAATTCGATGAGATCGAGGAAGAGCTCAAGGGTTAGCTGACATCGAAAAGCCAAGAAGTC
TTGTTTTGCGTAATGGACAGGTGCAAGGACTGCTTTTCAACTTTCGAGTAATCCTGGAGT
GCAGTCGAGCATTGAAACAGAGTGTCAATACTCCATAAGACAGTGTTGTGTATATAGTGG
TGGGATTTAGCATATCAAATCTTATTATAAGAAGCGGCAGCAGCGACAACAAAGCTATTG
ATTACATACGTGCTGGTAGCAAGNCTGGCTTTGAAGGCTC
■■Homology search results ■■ -
sp_hit_id O70405
Definition sp|O70405|ULK1_MOUSE Serine/threonine-protein kinase ULK1 OS=Mus musculus
Align length 44
Score (bit) 31.2
E-value 1.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912944|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_F06.
         (340 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O70405|ULK1_MOUSE Serine/threonine-protein kinase ULK1 OS=Mus...    31   1.7  
sp|O75385|ULK1_HUMAN Serine/threonine-protein kinase ULK1 OS=Hom...    31   1.7  
sp|Q80YR7|CLSPN_MOUSE Claspin OS=Mus musculus GN=Clspn PE=2 SV=1       30   2.9  
sp|Q9HAW4|CLSPN_HUMAN Claspin OS=Homo sapiens GN=CLSPN PE=1 SV=3       30   2.9  

>sp|O70405|ULK1_MOUSE Serine/threonine-protein kinase ULK1 OS=Mus
           musculus GN=Ulk1 PE=1 SV=1
          Length = 1051

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = -3

Query: 245 SHHYIHNTVLWSIDTL-FQCSTALQDYSKVEKQSLHLSITQNKT 117
           S HY     LWSI T+ +QC T    +     Q L L   +NKT
Sbjct: 195 SQHYDGKADLWSIGTIVYQCLTGKAPFQASSPQDLRLFYEKNKT 238


>sp|O75385|ULK1_HUMAN Serine/threonine-protein kinase ULK1 OS=Homo
           sapiens GN=ULK1 PE=1 SV=1
          Length = 1050

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = -3

Query: 245 SHHYIHNTVLWSIDTL-FQCSTALQDYSKVEKQSLHLSITQNKT 117
           S HY     LWSI T+ +QC T    +     Q L L   +NKT
Sbjct: 195 SQHYDGKADLWSIGTIVYQCLTGKAPFQASSPQDLRLFYEKNKT 238


>sp|Q80YR7|CLSPN_MOUSE Claspin OS=Mus musculus GN=Clspn PE=2 SV=1
          Length = 1315

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = +1

Query: 4    DKSKGNNVDVGSHDETEGWEFDEIEEEL 87
            D+++ +  DVGS DE +G E DE EE++
Sbjct: 1033 DEAEVSGSDVGSEDEYDGEEIDEYEEDV 1060


>sp|Q9HAW4|CLSPN_HUMAN Claspin OS=Homo sapiens GN=CLSPN PE=1 SV=3
          Length = 1339

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = +1

Query: 4    DKSKGNNVDVGSHDETEGWEFDEIEEEL 87
            D+++ +  DVGS DE +G E DE EE++
Sbjct: 1056 DEAEVSGSDVGSEDEYDGEEIDEYEEDV 1083
tr_hit_id Q5ZCC7
Definition tr|Q5ZCC7|Q5ZCC7_ORYSJ Putative uncharacterized protein P0011G08.18 OS=Oryza sativa subsp. japonica
Align length 26
Score (bit) 33.1
E-value 7.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912944|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_F06.
         (340 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5ZCC7|Q5ZCC7_ORYSJ Putative uncharacterized protein P0011G08...    33   7.1  
tr|Q0JQK0|Q0JQK0_ORYSJ Os01g0155400 protein (Fragment) OS=Oryza ...    33   7.1  
tr|B8ADC7|B8ADC7_ORYSI Putative uncharacterized protein OS=Oryza...    33   7.1  
tr|A2ZPF4|A2ZPF4_ORYSJ Putative uncharacterized protein OS=Oryza...    33   7.1  
tr|Q75IS0|Q75IS0_ORYSJ Putative uncharacterized protein OSJNBb00...    33   9.3  
tr|Q0DKI0|Q0DKI0_ORYSJ Os05g0162200 protein OS=Oryza sativa subs...    33   9.3  
tr|B8AYE8|B8AYE8_ORYSI Putative uncharacterized protein OS=Oryza...    33   9.3  
tr|A3B091|A3B091_ORYSJ Putative uncharacterized protein OS=Oryza...    33   9.3  

>tr|Q5ZCC7|Q5ZCC7_ORYSJ Putative uncharacterized protein P0011G08.18
           OS=Oryza sativa subsp. japonica GN=P0011G08.18 PE=4 SV=1
          Length = 391

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = +1

Query: 37  SHDETEGWEFDEIEEELKG*LTSKSQ 114
           S +E  GWEFDE+EEEL+  + SKSQ
Sbjct: 367 SPEEISGWEFDELEEELRADI-SKSQ 391


>tr|Q0JQK0|Q0JQK0_ORYSJ Os01g0155400 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os01g0155400 PE=4 SV=1
          Length = 445

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = +1

Query: 37  SHDETEGWEFDEIEEELKG*LTSKSQ 114
           S +E  GWEFDE+EEEL+  + SKSQ
Sbjct: 421 SPEEISGWEFDELEEELRADI-SKSQ 445


>tr|B8ADC7|B8ADC7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_00464 PE=4 SV=1
          Length = 646

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = +1

Query: 37  SHDETEGWEFDEIEEELKG*LTSKSQ 114
           S +E  GWEFDE+EEEL+  + SKSQ
Sbjct: 622 SPEEISGWEFDELEEELRADI-SKSQ 646


>tr|A2ZPF4|A2ZPF4_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_000426 PE=4 SV=1
          Length = 648

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = +1

Query: 37  SHDETEGWEFDEIEEELKG*LTSKSQ 114
           S +E  GWEFDE+EEEL+  + SKSQ
Sbjct: 624 SPEEISGWEFDELEEELRADI-SKSQ 648


>tr|Q75IS0|Q75IS0_ORYSJ Putative uncharacterized protein
           OSJNBb0099P06.3 OS=Oryza sativa subsp. japonica
           GN=OSJNBb0099P06.3 PE=4 SV=1
          Length = 798

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 7/37 (18%)
 Frame = +1

Query: 1   PDKSKGN-NVDVGSHD------ETEGWEFDEIEEELK 90
           PD    N   ++GS D      E  GWEFDE+EE+LK
Sbjct: 761 PDNELANLGAELGSEDRDFSGEEINGWEFDELEEDLK 797


>tr|Q0DKI0|Q0DKI0_ORYSJ Os05g0162200 protein OS=Oryza sativa subsp.
           japonica GN=Os05g0162200 PE=4 SV=1
          Length = 438

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 7/37 (18%)
 Frame = +1

Query: 1   PDKSKGN-NVDVGSHD------ETEGWEFDEIEEELK 90
           PD    N   ++GS D      E  GWEFDE+EE+LK
Sbjct: 401 PDNELANLGAELGSEDRDFSGEEINGWEFDELEEDLK 437


>tr|B8AYE8|B8AYE8_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_18571 PE=4 SV=1
          Length = 814

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 7/37 (18%)
 Frame = +1

Query: 1   PDKSKGN-NVDVGSHD------ETEGWEFDEIEEELK 90
           PD    N   ++GS D      E  GWEFDE+EE+LK
Sbjct: 777 PDNELANLGAELGSEDRDFSGEEINGWEFDELEEDLK 813


>tr|A3B091|A3B091_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_016463 PE=4 SV=1
          Length = 675

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 7/37 (18%)
 Frame = +1

Query: 1   PDKSKGN-NVDVGSHD------ETEGWEFDEIEEELK 90
           PD    N   ++GS D      E  GWEFDE+EE+LK
Sbjct: 638 PDNELANLGAELGSEDRDFSGEEINGWEFDELEEDLK 674