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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912947
Clone id YMU001_000024_F09
Library
Length 532
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000024_F09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AACTGGAAGATTCGCGGCCGCGAATTCGAGCAAGAGTGGCGAAGACGCAAAATGGCGATG
CGGATTTCTGAGGAGGAAGGTCGATTGAAAAAAGATGAAGAAGAGGCAAGGGAACTCTCC
AAAAGGAAGCGGGAGAATGATCAGAAATGGGAAGACACGAGGGAGAACCGGGTCACAAGT
TGGCGAGACTTCATGAAAGCTGGAAAAAAGGCCAAGAAAGGAGAGCTGCGGCCGCCAAAG
CTGAAGACTGAAGACCCAAACAAGTCATATGTACAGCGGCCAGTTAAAAAGGGCTGAGGT
GGGTAATTCAGGTGATTTGGTTCTAACATAAAGAGCGGCCTCTTTTGTAACATATGAACA
TTTACGACTCTTGGGAAAATACATCCACAGTGAAGGCTTGGCTTCGTAAAAATTTATGAT
GCCTAAATTGTTTATTGGACATGTAATGTAGTTCCCTGAGGCTGAGCCTTATCAAAGACC
CTTAGCTTCTCTTTCATGAAAGTCCACTGATATTGTTTTGCCCAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q642C0
Definition sp|Q642C0|DNJC8_RAT DnaJ homolog subfamily C member 8 OS=Rattus norvegicus
Align length 53
Score (bit) 48.1
E-value 2.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912947|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_F09.
         (505 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q642C0|DNJC8_RAT DnaJ homolog subfamily C member 8 OS=Rattus ...    48   2e-05
sp|Q6NZB0|DNJC8_MOUSE DnaJ homolog subfamily C member 8 OS=Mus m...    48   2e-05
sp|O75937|DNJC8_HUMAN DnaJ homolog subfamily C member 8 OS=Homo ...    48   2e-05
sp|O74746|SPF31_SCHPO J domain-containing protein spf31 OS=Schiz...    42   0.002
sp|Q81842|AANT_HDVP1 Large delta antigen OS=Hepatitis delta viru...    32   2.2  
sp|P29974|CNGA1_MOUSE cGMP-gated cation channel alpha-1 OS=Mus m...    30   6.5  

>sp|Q642C0|DNJC8_RAT DnaJ homolog subfamily C member 8 OS=Rattus
           norvegicus GN=Dnajc8 PE=2 SV=1
          Length = 253

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
 Frame = +1

Query: 79  ARELSKRKRENDQKWEDTRENRVTSWRDFM--KAGKKAKKGE--LRPPKLKTE 225
           A+E +KR+RE  + +E++R+ RV SWR+F     GKK KK    LRPPK+K E
Sbjct: 198 AQEKAKREREWQKNFEESRDGRVDSWRNFQANTKGKKEKKNRTFLRPPKVKME 250


>sp|Q6NZB0|DNJC8_MOUSE DnaJ homolog subfamily C member 8 OS=Mus
           musculus GN=Dnajc8 PE=2 SV=2
          Length = 253

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
 Frame = +1

Query: 79  ARELSKRKRENDQKWEDTRENRVTSWRDFM--KAGKKAKKGE--LRPPKLKTE 225
           A+E +KR+RE  + +E++R+ RV SWR+F     GKK KK    LRPPK+K E
Sbjct: 198 AQEKAKREREWQKNFEESRDGRVDSWRNFQANTKGKKEKKNRTFLRPPKVKME 250


>sp|O75937|DNJC8_HUMAN DnaJ homolog subfamily C member 8 OS=Homo
           sapiens GN=DNAJC8 PE=1 SV=2
          Length = 253

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
 Frame = +1

Query: 79  ARELSKRKRENDQKWEDTRENRVTSWRDFM--KAGKKAKKGE--LRPPKLKTE 225
           A+E +KR+RE  + +E++R+ RV SWR+F     GKK KK    LRPPK+K E
Sbjct: 198 AQEKAKREREWQKNFEESRDGRVDSWRNFQANTKGKKEKKNRTFLRPPKVKME 250


>sp|O74746|SPF31_SCHPO J domain-containing protein spf31
           OS=Schizosaccharomyces pombe GN=spf31 PE=2 SV=1
          Length = 209

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
 Frame = +1

Query: 13  RRRKMAMRISXXXXXXXXXXXXARELSKRKRENDQKWEDTRENRVTSWRDFMKAGKK--A 186
           RRR   + ++            ARE  KR+ E+++ WE+TR+NRV +W+DF+   KK   
Sbjct: 140 RRRARQLDLANQQREQARQDEIARE-RKRRVESEKVWEETRDNRVGNWQDFLHKTKKNNL 198

Query: 187 KKGELRP 207
           KK   +P
Sbjct: 199 KKKNKKP 205


>sp|Q81842|AANT_HDVP1 Large delta antigen OS=Hepatitis delta virus
           genotype III (isolate Peru-1) PE=1 SV=1
          Length = 214

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +1

Query: 79  ARELSKRKRENDQKWEDTRENRVTSWRDFMKAGKKAKKGELRPPKL 216
           AR  SK + E  ++W + R+NR    +D  +A KK KK E   P L
Sbjct: 6   ARLTSKEREEILEQWVEERKNRRKLEKDLRRANKKIKKLEDENPWL 51


>sp|P29974|CNGA1_MOUSE cGMP-gated cation channel alpha-1 OS=Mus
           musculus GN=Cnga1 PE=2 SV=2
          Length = 684

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +1

Query: 82  RELSKRKRENDQKWEDTRENRVTSWRDFMKAGKKAKKGELRPPKLKTEDPNKSYV 246
           +E  K+K+E   K +D  EN+    +   K  +K KK +    K K E+  K  V
Sbjct: 94  KEKKKKKKEKKSKADDKNENKKDPEKKKKKEKEKEKKKKEEKTKEKKEEEKKEVV 148
tr_hit_id A9TXK9
Definition tr|A9TXK9|A9TXK9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 89
Score (bit) 133.0
E-value 6.0e-30
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912947|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_F09.
         (505 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TXK9|A9TXK9_PHYPA Predicted protein OS=Physcomitrella paten...   133   6e-30
tr|Q9C580|Q9C580_ARATH Putative uncharacterized protein At5g2208...   132   1e-29
tr|A7QVR3|A7QVR3_VITVI Chromosome undetermined scaffold_191, who...   131   2e-29
tr|Q10NS2|Q10NS2_ORYSJ Os03g0261500 protein OS=Oryza sativa subs...   126   7e-28
tr|A3AG94|A3AG94_ORYSJ Putative uncharacterized protein OS=Oryza...   126   7e-28
tr|A2XER6|A2XER6_ORYSI Putative uncharacterized protein OS=Oryza...   126   7e-28
tr|B4FTV3|B4FTV3_MAIZE DnaJ subfamily C member 8 OS=Zea mays PE=...   125   9e-28
tr|A8JGX7|A8JGX7_CHLRE DnaJ-like protein OS=Chlamydomonas reinha...    82   1e-14
tr|A1CTZ1|A1CTZ1_ASPCL DnaJ domain protein OS=Aspergillus clavat...    54   3e-06
tr|Q5BFU0|Q5BFU0_EMENI Putative uncharacterized protein OS=Emeri...    54   6e-06
tr|B6HLF1|B6HLF1_PENCH Pc21g20940 protein OS=Penicillium chrysog...    53   7e-06
tr|B8MET8|B8MET8_9EURO DnaJ domain protein OS=Talaromyces stipit...    53   1e-05
tr|A7ESW4|A7ESW4_SCLS1 Putative uncharacterized protein OS=Scler...    53   1e-05
tr|Q0CMM4|Q0CMM4_ASPTN Putative uncharacterized protein OS=Asper...    52   2e-05
tr|A6RS78|A6RS78_BOTFB Putative uncharacterized protein OS=Botry...    52   2e-05
tr|A1DNF8|A1DNF8_NEOFI DnaJ domain protein OS=Neosartorya fische...    52   2e-05
tr|B6QNG7|B6QNG7_PENMA DnaJ domain protein OS=Penicillium marnef...    51   3e-05
tr|A4S7R8|A4S7R8_OSTLU Predicted protein OS=Ostreococcus lucimar...    50   5e-05
tr|Q8NJM6|Q8NJM6_ASPFU Hypothetical DNA j domain containing prot...    50   5e-05
tr|Q4WM61|Q4WM61_ASPFU DnaJ domain protein OS=Aspergillus fumiga...    50   5e-05
tr|B0Y8E7|B0Y8E7_ASPFC DnaJ domain protein OS=Aspergillus fumiga...    50   5e-05
tr|Q00UZ1|Q00UZ1_OSTTA Predicted molecular chaperone (DnaJ super...    50   6e-05
tr|Q2UHB6|Q2UHB6_ASPOR Predicted molecular chaperone OS=Aspergil...    50   6e-05
tr|B8N8Y0|B8N8Y0_ASPFL DnaJ domain protein OS=Aspergillus flavus...    50   6e-05
tr|A2QS01|A2QS01_ASPNC Contig An08c0210, complete genome OS=Aspe...    50   8e-05
tr|Q2H0R1|Q2H0R1_CHAGB Putative uncharacterized protein OS=Chaet...    49   1e-04
tr|B5FZJ7|B5FZJ7_TAEGU Putative DnaJ subfamily C member 8 OS=Tae...    48   2e-04
tr|A2ALF3|A2ALF3_MOUSE DnaJ (Hsp40) homolog, subfamily C, member...    48   2e-04
tr|A2ALF2|A2ALF2_MOUSE DnaJ (Hsp40) homolog, subfamily C, member...    48   2e-04
tr|A2ALF0|A2ALF0_MOUSE DnaJ (Hsp40) homolog, subfamily C, member...    48   2e-04

>tr|A9TXK9|A9TXK9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_172561 PE=4 SV=1
          Length = 244

 Score =  133 bits (334), Expect = 6e-30
 Identities = 62/89 (69%), Positives = 70/89 (78%)
 Frame = +1

Query: 1   EQEWRRRKMAMRISXXXXXXXXXXXXARELSKRKRENDQKWEDTRENRVTSWRDFMKAGK 180
           EQEWRRRK+ MRIS             RE+ K KRE+++KWE+TRENRV+SWR+F K GK
Sbjct: 156 EQEWRRRKLTMRISEEEGRVKKEEEETREMWKHKREHEEKWEETRENRVSSWRNFQKGGK 215

Query: 181 KAKKGELRPPKLKTEDPNKSYVQRPVKKG 267
           K KKGELRPPKLKTEDPNKSYVQRPVKKG
Sbjct: 216 KTKKGELRPPKLKTEDPNKSYVQRPVKKG 244


>tr|Q9C580|Q9C580_ARATH Putative uncharacterized protein At5g22080
           (Putative uncharacterized protein At5g22080/T6G21_190)
           OS=Arabidopsis thaliana GN=At5g22080/T6G21_190 PE=2 SV=1
          Length = 246

 Score =  132 bits (331), Expect = 1e-29
 Identities = 62/89 (69%), Positives = 71/89 (79%)
 Frame = +1

Query: 1   EQEWRRRKMAMRISXXXXXXXXXXXXARELSKRKRENDQKWEDTRENRVTSWRDFMKAGK 180
           +QEWRRRKMAMRIS             +E+ K+KRE++++WE TRE RV+SWRDF KAGK
Sbjct: 158 DQEWRRRKMAMRISEEEGRLKKDEAEQKEIWKKKREHEEQWEGTREKRVSSWRDFQKAGK 217

Query: 181 KAKKGELRPPKLKTEDPNKSYVQRPVKKG 267
           KAKKGE RPPKLKTEDPNKSYVQRPVKKG
Sbjct: 218 KAKKGETRPPKLKTEDPNKSYVQRPVKKG 246


>tr|A7QVR3|A7QVR3_VITVI Chromosome undetermined scaffold_191, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00007486001 PE=4 SV=1
          Length = 246

 Score =  131 bits (330), Expect = 2e-29
 Identities = 61/89 (68%), Positives = 70/89 (78%)
 Frame = +1

Query: 1   EQEWRRRKMAMRISXXXXXXXXXXXXARELSKRKRENDQKWEDTRENRVTSWRDFMKAGK 180
           EQEWRRRKM MRIS             +E+ KRKRE++++WE TRE RV+SWRDFMK GK
Sbjct: 158 EQEWRRRKMQMRISEEEGRLKKDEEDTKEMWKRKREHEEQWEGTREQRVSSWRDFMKTGK 217

Query: 181 KAKKGELRPPKLKTEDPNKSYVQRPVKKG 267
           K KKGE+RPPKLKTEDPNKSYVQRPVK+G
Sbjct: 218 KGKKGEIRPPKLKTEDPNKSYVQRPVKRG 246


>tr|Q10NS2|Q10NS2_ORYSJ Os03g0261500 protein OS=Oryza sativa subsp.
           japonica GN=Os03g0261500 PE=2 SV=1
          Length = 298

 Score =  126 bits (316), Expect = 7e-28
 Identities = 56/88 (63%), Positives = 71/88 (80%)
 Frame = +1

Query: 1   EQEWRRRKMAMRISXXXXXXXXXXXXARELSKRKRENDQKWEDTRENRVTSWRDFMKAGK 180
           ++EWRRRKM MRIS             +E+ K+KRE+++KWE+TR+ RV+SWRDFMK GK
Sbjct: 210 DKEWRRRKMQMRISEEEGRLKKDEEETKEMWKKKREHEEKWEETRDQRVSSWRDFMKTGK 269

Query: 181 KAKKGELRPPKLKTEDPNKSYVQRPVKK 264
           KA+KGE++PPKLKTEDPNKSYVQRPVK+
Sbjct: 270 KARKGEIKPPKLKTEDPNKSYVQRPVKR 297


>tr|A3AG94|A3AG94_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_009816 PE=4 SV=1
          Length = 246

 Score =  126 bits (316), Expect = 7e-28
 Identities = 56/88 (63%), Positives = 71/88 (80%)
 Frame = +1

Query: 1   EQEWRRRKMAMRISXXXXXXXXXXXXARELSKRKRENDQKWEDTRENRVTSWRDFMKAGK 180
           ++EWRRRKM MRIS             +E+ K+KRE+++KWE+TR+ RV+SWRDFMK GK
Sbjct: 158 DKEWRRRKMQMRISEEEGRLKKDEEETKEMWKKKREHEEKWEETRDQRVSSWRDFMKTGK 217

Query: 181 KAKKGELRPPKLKTEDPNKSYVQRPVKK 264
           KA+KGE++PPKLKTEDPNKSYVQRPVK+
Sbjct: 218 KARKGEIKPPKLKTEDPNKSYVQRPVKR 245


>tr|A2XER6|A2XER6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_10830 PE=4 SV=1
          Length = 246

 Score =  126 bits (316), Expect = 7e-28
 Identities = 56/88 (63%), Positives = 71/88 (80%)
 Frame = +1

Query: 1   EQEWRRRKMAMRISXXXXXXXXXXXXARELSKRKRENDQKWEDTRENRVTSWRDFMKAGK 180
           ++EWRRRKM MRIS             +E+ K+KRE+++KWE+TR+ RV+SWRDFMK GK
Sbjct: 158 DKEWRRRKMQMRISEEEGRLKKDEEETKEMWKKKREHEEKWEETRDQRVSSWRDFMKTGK 217

Query: 181 KAKKGELRPPKLKTEDPNKSYVQRPVKK 264
           KA+KGE++PPKLKTEDPNKSYVQRPVK+
Sbjct: 218 KARKGEIKPPKLKTEDPNKSYVQRPVKR 245


>tr|B4FTV3|B4FTV3_MAIZE DnaJ subfamily C member 8 OS=Zea mays PE=2
           SV=1
          Length = 246

 Score =  125 bits (315), Expect = 9e-28
 Identities = 56/88 (63%), Positives = 70/88 (79%)
 Frame = +1

Query: 1   EQEWRRRKMAMRISXXXXXXXXXXXXARELSKRKRENDQKWEDTRENRVTSWRDFMKAGK 180
           ++EWRRRKM MRIS             +E+ KRKRE+++KWE+TR+ RV+SWRDFMK GK
Sbjct: 158 DKEWRRRKMQMRISEEEGRLKKDEEETKEMWKRKREHEEKWEETRDKRVSSWRDFMKTGK 217

Query: 181 KAKKGELRPPKLKTEDPNKSYVQRPVKK 264
           K +KGE++PPKLKTEDPNKSYVQRPVK+
Sbjct: 218 KGRKGEIKPPKLKTEDPNKSYVQRPVKR 245


>tr|A8JGX7|A8JGX7_CHLRE DnaJ-like protein OS=Chlamydomonas
           reinhardtii GN=DNJ27 PE=4 SV=1
          Length = 294

 Score = 82.0 bits (201), Expect = 1e-14
 Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
 Frame = +1

Query: 7   EWRRRKMAMRISXXXXXXXXXXXXARELSKRKRENDQKWEDTRENRVTSWRDFMK-AGKK 183
           EWR+RK+  R+             A+E  K K+E++Q WE  R+ RVT W D++K  G K
Sbjct: 194 EWRKRKLGKRLKEETLRIEEKEKDAKERHKAKKEHEQNWEKNRDQRVTGWHDYLKGGGNK 253

Query: 184 AKKGELRPPKLKTEDPNKSYVQRP 255
              G L+PPKLKT D +K YVQRP
Sbjct: 254 KSTGMLKPPKLKTNDDDKLYVQRP 277


>tr|A1CTZ1|A1CTZ1_ASPCL DnaJ domain protein OS=Aspergillus clavatus
           GN=ACLA_084730 PE=4 SV=1
          Length = 214

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 28/71 (39%), Positives = 36/71 (50%)
 Frame = +1

Query: 1   EQEWRRRKMAMRISXXXXXXXXXXXXARELSKRKRENDQKWEDTRENRVTSWRDFMKAGK 180
           E+E RRR+                    E  KRKRE+++ WEDTRE R+ SWRDF K  K
Sbjct: 138 EEEARRRRQLKAKLQEEGREQRKEEEELEARKRKREHEKVWEDTREERIGSWRDFQKGHK 197

Query: 181 KAKKGELRPPK 213
           K   G+ +  K
Sbjct: 198 KGGDGDKKKKK 208


>tr|Q5BFU0|Q5BFU0_EMENI Putative uncharacterized protein
           OS=Emericella nidulans GN=AN0590.2 PE=4 SV=1
          Length = 210

 Score = 53.5 bits (127), Expect = 6e-06
 Identities = 31/73 (42%), Positives = 37/73 (50%)
 Frame = +1

Query: 1   EQEWRRRKMAMRISXXXXXXXXXXXXARELSKRKRENDQKWEDTRENRVTSWRDFMKAGK 180
           E+E RRR+ A                  E  KRKRE  Q WEDTRE R+ SWRD+ K  K
Sbjct: 137 EEEARRRRQAKAKLQEEGRERRKEEQEIEERKRKREQQQAWEDTREQRIGSWRDWQKGQK 196

Query: 181 KAKKGELRPPKLK 219
             K GE +  K+K
Sbjct: 197 --KDGEKKKKKMK 207