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BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912952|Adiantum capillus-veneris mRNA, clone: YMU001_000024_G02. (498 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9SZD8|Q9SZD8_ARATH Putative uncharacterized protein F19B15.1... 45 0.002 tr|Q9C697|Q9C697_ARATH Reverse transcriptase, putative; 16838-20... 42 0.012 tr|Q9SJ38|Q9SJ38_ARATH Putative non-LTR retroelement reverse tra... 42 0.021 tr|O64712|O64712_ARATH Putative reverse transcriptase OS=Arabido... 40 0.061 tr|A1ZDY9|A1ZDY9_9SPHI SprA OS=Microscilla marina ATCC 23134 GN=... 40 0.079 tr|Q7XJS2|Q7XJS2_ARATH Putative non-LTR retroelement reverse tra... 38 0.23 tr|Q9SIS9|Q9SIS9_ARATH Putative non-LTR retroelement reverse tra... 38 0.30 tr|O22148|O22148_ARATH Putative non-LTR retroelement reverse tra... 38 0.30 tr|Q01N39|Q01N39_ORYSA H0215A08.3 protein OS=Oryza sativa GN=H02... 31 0.49 tr|Q9SK98|Q9SK98_ARATH Very similar to retrotransposon reverse t... 37 0.52 tr|Q2HVU8|Q2HVU8_MEDTR Polynucleotidyl transferase, Ribonuclease... 37 0.52 tr|O80591|O80591_ARATH T27I1.2 protein OS=Arabidopsis thaliana G... 37 0.52 tr|A2Q2E7|A2Q2E7_MEDTR Polynucleotidyl transferase, Ribonuclease... 37 0.52 tr|Q9SZ87|Q9SZ87_ARATH RNA-directed DNA polymerase-like protein ... 37 0.67 tr|Q9FJA4|Q9FJA4_ARATH Non-LTR retroelement reverse transcriptas... 37 0.67 tr|Q9C7N6|Q9C7N6_ARATH Reverse transcriptase, putative; 100033-1... 37 0.67 tr|A5B0A4|A5B0A4_VITVI Putative uncharacterized protein OS=Vitis... 33 1.0 tr|A5C8M0|A5C8M0_VITVI Putative uncharacterized protein OS=Vitis... 35 1.1 tr|Q9LSE9|Q9LSE9_ARATH Reverse transcriptase-like protein OS=Ara... 36 1.1 tr|B7PEG6|B7PEG6_IXOSC Putative uncharacterized protein OS=Ixode... 36 1.2 tr|A5AED3|A5AED3_VITVI Putative uncharacterized protein OS=Vitis... 32 1.4 tr|A3BEP0|A3BEP0_ORYSJ Putative uncharacterized protein OS=Oryza... 33 1.5 tr|A2Q3D2|A2Q3D2_MEDTR Putative non-LTR retroelement reverse tra... 35 1.5 tr|Q9ZVH1|Q9ZVH1_ARATH T2P11.5 protein OS=Arabidopsis thaliana G... 35 2.0 tr|A2Q2Z7|A2Q2Z7_MEDTR Contains similarity to reverse trancripta... 35 2.0 tr|Q9ZQF8|Q9ZQF8_ARATH Putative non-LTR retroelement reverse tra... 35 2.6 tr|Q9SHP2|Q9SHP2_ARATH Putative non-LTR retroelement reverse tra... 35 2.6 tr|Q7X7T7|Q7X7T7_ORYSJ OSJNBa0084K20.4 protein (OSJNBa0076N16.2 ... 28 2.6 tr|Q1SMZ7|Q1SMZ7_MEDTR Ribonuclease H OS=Medicago truncatula GN=... 34 3.3 tr|A5B8I6|A5B8I6_VITVI Putative uncharacterized protein OS=Vitis... 28 3.8
>tr|Q9SZD8|Q9SZD8_ARATH Putative uncharacterized protein F19B15.120 (Putative reverse transcriptase/RNA-dependent DNA polymerase) (Putative uncharacterized protein AT4g29090) OS=Arabidopsis thaliana GN=F19B15.120 PE=2 SV=1 Length = 575
Score = 45.1 bits (105), Expect = 0.002 Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 3/76 (3%) Frame = -1
Query: 492 FLWRCLMGILPIGSFLQKRRISP-SCCVHSSASEESVQHLLWDCRYTRVFIAWVSTLMCL 316 FLW+CL LP+ L R +S S C+ + +E+V HLL+ C + R+ A S + L Sbjct: 269 FLWKCLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCTFARLTWAISSIPIPL 328
Query: 315 --RFPVAVFGKKFWLF 274 + +++ +W+F Sbjct: 329 GGEWADSIYVNLYWVF 344
>tr|Q9C697|Q9C697_ARATH Reverse transcriptase, putative; 16838-20266 OS=Arabidopsis thaliana GN=T6B12.3 PE=4 SV=1 Length = 1142
Score = 42.4 bits (98), Expect = 0.012 Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Frame = -1
Query: 498 RLFLWRCLMGILPIGSFLQKRRI-SPSCCVHSSASEESVQHLLWDCRYTR 352 R FLW+ L G +P+ L+KR I CV ASEES+ H L+ C R Sbjct: 838 RHFLWQILSGCVPVSENLRKRGILCDKGCVSCGASEESINHTLFQCHPAR 887
Score = 34.7 bits (78), Expect = 2.6 Identities = 10/33 (30%), Positives = 21/33 (63%) Frame = -2
Query: 224 WAFWSIWCQRNSRMFDHIDLDPFPYFKMSLRQS 126 W W IW RN ++F+++D DP ++++++ Sbjct: 929 WIIWYIWKARNEKVFENVDKDPMEILLLAVKEA 961
>tr|Q9SJ38|Q9SJ38_ARATH Putative non-LTR retroelement reverse transcriptase OS=Arabidopsis thaliana GN=At2g05200 PE=2 SV=1 Length = 1229
Score = 41.6 bits (96), Expect = 0.021 Identities = 17/44 (38%), Positives = 24/44 (54%) Frame = -1
Query: 489 LWRCLMGILPIGSFLQKRRISPSCCVHSSASEESVQHLLWDCRY 358 +W+ M LP+G L +R ISPS H + ES HL + C + Sbjct: 947 MWKAAMEALPVGIQLVRRHISPSAACHRCGAPESTTHLFFHCEF 990
>tr|O64712|O64712_ARATH Putative reverse transcriptase OS=Arabidopsis thaliana GN=At2g02650 PE=2 SV=1 Length = 365
Score = 40.0 bits (92), Expect = 0.061 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = -1
Query: 492 FLWRCLMGILPIGSFLQKRRI-SPSCCVHSSASEESVQHLLWDCRYTR 352 FLWRC+ G L + L+ R I + C EE++ H++++C YT+ Sbjct: 49 FLWRCVTGALATNTRLRSRNIDADPICQRCCIEEETIHHIMFNCPYTQ 96
>tr|A1ZDY9|A1ZDY9_9SPHI SprA OS=Microscilla marina ATCC 23134 GN=M23134_04130 PE=4 SV=1 Length = 2420
Score = 39.7 bits (91), Expect = 0.079 Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 8/100 (8%) Frame = +1
Query: 169 SMWSNMRELRWHQILQKAQYRTHTKKVAKGQRHE-FKKPEFLPKDRYGK---TETHECR- 333 S+W M+ Q+++ T + K K + + FK P F+PKDRYG + H+ R Sbjct: 46 SVWQQMKVA-----YQRSRSDTDSTKTKKPEPYNRFKPPVFVPKDRYGDPIISNGHKSRL 100
Query: 334 ---NPSNKDSSIATIP*QVLNRFFGSRAMNAT*GADPTLL 444 PSN ++I +P NRF + T PT+L Sbjct: 101 IYGAPSNLKTTIKLLPDSAGNRFVVDENLGKTSYRPPTVL 140
>tr|Q7XJS2|Q7XJS2_ARATH Putative non-LTR retroelement reverse transcriptase OS=Arabidopsis thaliana GN=At2g17910 PE=2 SV=1 Length = 1344
Score = 38.1 bits (87), Expect = 0.23 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Frame = -1
Query: 498 RLFLWRCLMGILPIGSFLQKRRI-SPSCCVHSSASEESVQHLLWDCRYTR 352 R+FLW+ L G +P+ L+ R I S C+ E++ H+L++C R Sbjct: 1034 RIFLWKALHGAIPVEDRLRTRGIRSDDGCLMCDTENETINHILFECPLAR 1083
>tr|Q9SIS9|Q9SIS9_ARATH Putative non-LTR retroelement reverse transcriptase OS=Arabidopsis thaliana GN=At2g01840 PE=2 SV=1 Length = 1715
Score = 37.7 bits (86), Expect = 0.30 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = -1
Query: 492 FLWRCLMGILPIGSFLQKRRI-SPSCCVHSSASEESVQHLLWDCRYTRV 349 F+WRCL G L + L+ R I + C ++E++ H+++ C Y +V Sbjct: 1400 FIWRCLSGALSTTTQLRNRNIPADPTCQRCCNADETINHIIFTCSYAQV 1448
>tr|O22148|O22148_ARATH Putative non-LTR retroelement reverse transcriptase OS=Arabidopsis thaliana GN=At2g45230 PE=2 SV=1 Length = 1374
Score = 37.7 bits (86), Expect = 0.30 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Frame = -1
Query: 492 FLWRCLMGILPIGSFLQKRRIS-PSCCVHSSASEESVQHLLWDCRYTRV 349 FLWRC+ L + S L R ++ CV + E+V HLL+ C + R+ Sbjct: 1066 FLWRCVNNCLSVASNLAYRHLAREKSCVRCPSHGETVNHLLFKCPFARL 1114
>tr|Q01N39|Q01N39_ORYSA H0215A08.3 protein OS=Oryza sativa GN=H0215A08.3 PE=4 SV=1 Length = 1186
Score = 30.8 bits (68), Expect(2) = 0.49 Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 1/65 (1%) Frame = -1
Query: 498 RLFLWRCLMGILPIGSFLQKRRIS-PSCCVHSSASEESVQHLLWDCRYTRVFIAWVSTLM 322 R FLW M L+ R + P CV EES+ H+L C +R W TL Sbjct: 1034 RFFLWLVAMNKCWTADRLRSRGLPHPDRCVLCDQQEESIDHILVGCPESRQL--WWWTLR 1091
Query: 321 CLRFP 307 L P Sbjct: 1092 ALVIP 1096
Score = 25.4 bits (54), Expect(2) = 0.49 Identities = 8/13 (61%), Positives = 12/13 (92%) Frame = -2
Query: 215 WSIWCQRNSRMFD 177 WSIW +RN+R+F+ Sbjct: 1134 WSIWKERNNRIFN 1146
>tr|Q9SK98|Q9SK98_ARATH Very similar to retrotransposon reverse transcriptase OS=Arabidopsis thaliana GN=F12K8.9 PE=4 SV=1 Length = 1231
Score = 37.0 bits (84), Expect = 0.52 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Frame = -1
Query: 498 RLFLWRCLMGILPIGSFLQKRRIS-PSCCVHSSASEESVQHLLWDCRYTR 352 ++FLW+ L G +P+ L R + S C ES+QH+L+ C + R Sbjct: 904 KVFLWKVLSGAIPVVDLLSYRGMKLDSRCQTCGCEGESIQHVLFSCSFPR 953
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