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NBDC - LSDB Archive
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BP912954
Clone id YMU001_000024_G04
Library
Length 662
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000024_G04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AGCGAGGTTTGGGGGCAAGAAGGGTGCGAAGGCAGCGCCCAGGAAGAGCAGCTCCGCAGG
CAGCAAGGATCGGCCTCTGTGGTACCCCGGCTGCAAGCCCCCCGCATGGCTGGATGGCTC
TCTTGTAGGCGACTATGGCTTCGACCCGCTCTCTCTGGCCAAGCCCGCAGAATATTTGCA
GTTCGATTTCGACTCCTTGAACCAGAACTTGGCCAAGAATTCTGCAGGGGAGATTATTGG
AAATCGCGTGGACAGCATCACCAACATCAATGCCACTATCCAGCCCTACGCAGAGGCCTT
TGGTCTGCAGCGCTTCCGTGAATGCGAGCTCATCCATGGACGGTGGGCCATGCTTGCTAC
ATTGGGCGCCCTCGCCGTCGAAGCCTTCACTGGTGTCACATGGCAAGATGCTGGCAAGGT
TGAGCTTGTCGAGGGAGCTACCTACTTTGGCTTGCCTCTGCCCTTCTCCATCTCCACACT
GGTCTGGATCGAGGCCCTAGTCATTGGTTACATTGAGTTTCAAAGGAATGGAGAGCTTGA
CCCCGAGAAGCGCCTTTACCCAGGCGGCAAGTTCTTCGATCCATTGGGCCTTGCATCTGA
CCCTGAGAAGAAAGAGGTATTGAAGCTTGCCGAGATCAAGCATGCCAGGCTCGCCATGGT
GG
■■Homology search results ■■ -
sp_hit_id Q07473
Definition sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana
Align length 198
Score (bit) 324.0
E-value 3.0e-88
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912954|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_G04.
         (662 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chl...   324   3e-88
sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chl...   323   5e-88
sp|Q9S7W1|CB4C_ARATH Chlorophyll a-b binding protein CP29.3, chl...   306   8e-83
sp|Q93WD2|CB29_CHLRE Chlorophyll a-b binding protein CP29 OS=Chl...   223   7e-58
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...   117   5e-26
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...   116   9e-26
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...   112   1e-24
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c...   108   3e-23
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...   104   4e-22
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...    90   1e-17
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas...    80   1e-14
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...    78   5e-14
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...    77   1e-13
sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chlorop...    75   4e-13
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl...    75   4e-13
sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII typ...    74   5e-13
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl...    74   5e-13
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...    74   7e-13
sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloropl...    74   9e-13
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...    73   1e-12
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...    72   2e-12
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...    72   2e-12
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...    72   2e-12
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...    72   2e-12
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...    72   3e-12
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl...    72   3e-12
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...    72   3e-12
sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII typ...    72   3e-12
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop...    72   3e-12
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...    71   4e-12

>sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1,
           chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=2
           SV=1
          Length = 290

 Score =  324 bits (830), Expect = 3e-88
 Identities = 154/198 (77%), Positives = 169/198 (85%)
 Frame = +2

Query: 68  DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 247
           DRPLWYPG   P WLDGSLVGDYGFDP  L KPAEYLQFD DSL+QNLAKN AG++IG R
Sbjct: 54  DRPLWYPGAISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTR 113

Query: 248 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVEL 427
            ++    +   QPY+E FG+QRFRECELIHGRWAMLATLGAL+VE  TGVTWQDAGKVEL
Sbjct: 114 TEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVEL 173

Query: 428 VEGATYFGLPLPFSISTLVWIEALVIGYIEFQRNGELDPEKRLYPGGKFFDPLGLASDPE 607
           V+G++Y G PLPFSISTL+WIE LVIGYIEFQRN ELD EKRLYPGGKFFDPLGLA+DPE
Sbjct: 174 VDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPE 233

Query: 608 KKEVLKLAEIKHARLAMV 661
           K   L+LAEIKHARLAMV
Sbjct: 234 KTAQLQLAEIKHARLAMV 251


>sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2,
           chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1
           SV=1
          Length = 287

 Score =  323 bits (828), Expect = 5e-88
 Identities = 154/198 (77%), Positives = 169/198 (85%)
 Frame = +2

Query: 68  DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 247
           DRPLW+PG K P +LDGSLVGDYGFDP  L KPAEYLQFD DSL+QNLAKN  GE+IG R
Sbjct: 51  DRPLWFPGAKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTR 110

Query: 248 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVEL 427
            +++   +   QPY+E FGLQRFRECELIHGRWAMLATLGA+ VE  TGVTWQDAGKVEL
Sbjct: 111 TEAVDPKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVEL 170

Query: 428 VEGATYFGLPLPFSISTLVWIEALVIGYIEFQRNGELDPEKRLYPGGKFFDPLGLASDPE 607
           V+G++Y G PLPFSISTL+WIE LVIGYIEFQRN ELD EKRLYPGGKFFDPLGLASDP 
Sbjct: 171 VDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPV 230

Query: 608 KKEVLKLAEIKHARLAMV 661
           KK  L+LAEIKHARLAMV
Sbjct: 231 KKAQLQLAEIKHARLAMV 248


>sp|Q9S7W1|CB4C_ARATH Chlorophyll a-b binding protein CP29.3,
           chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=2
           SV=1
          Length = 276

 Score =  306 bits (783), Expect = 8e-83
 Identities = 143/198 (72%), Positives = 165/198 (83%)
 Frame = +2

Query: 68  DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 247
           DR +W+PG  PP WLDGS++GD GFDP  L KPAEYLQ+DFD L+QNLAKN AG+IIG  
Sbjct: 55  DRLVWFPGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGII 114

Query: 248 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVEL 427
            +S        QPY E FG+QRFRECELIHGRWAML TLGA+AVEA TG+ WQDAGKVEL
Sbjct: 115 QESSEIKPTPFQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVEL 174

Query: 428 VEGATYFGLPLPFSISTLVWIEALVIGYIEFQRNGELDPEKRLYPGGKFFDPLGLASDPE 607
           VEG++Y G PLPFS++TL+WIE LV+GYIEFQRN ELDPEKR+YPGG +FDPLGLA+DPE
Sbjct: 175 VEGSSYLGQPLPFSLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGG-YFDPLGLAADPE 233

Query: 608 KKEVLKLAEIKHARLAMV 661
           K + LKLAEIKH+RLAMV
Sbjct: 234 KLDTLKLAEIKHSRLAMV 251


>sp|Q93WD2|CB29_CHLRE Chlorophyll a-b binding protein CP29
           OS=Chlamydomonas reinhardtii GN=Lhcb4 PE=1 SV=3
          Length = 280

 Score =  223 bits (568), Expect = 7e-58
 Identities = 118/199 (59%), Positives = 143/199 (71%), Gaps = 4/199 (2%)
 Frame = +2

Query: 77  LWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGE---IIGNR 247
           LW P    P WLDGSL GD GFDPL L+KP+E++    D  +QN AKN+ G    I+   
Sbjct: 52  LWLPNTTRPEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQAT 111

Query: 248 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVEL 427
            D +++ N  + PY+E FGL RFRECELIHGRWAMLA LGAL  EA TGV+W +AGKVEL
Sbjct: 112 PDEVSSENR-LAPYSEVFGLARFRECELIHGRWAMLACLGALVAEATTGVSWVEAGKVEL 170

Query: 428 VEGATYFGLPLPFSISTLVWIEALVIGYIEFQRNGELDPEKRLYPGGKFFDPLGLASDPE 607
            +GA+Y GL LPFSI+ L+WIE +++G  EF RN E +PEKR YPGG  FDPL LAS+ E
Sbjct: 171 -DGASYAGLSLPFSITQLIWIEVILVGGAEFYRNSETNPEKRCYPGG-VFDPLKLASEDE 228

Query: 608 KKEV-LKLAEIKHARLAMV 661
           ++   LK AEIKHARLAMV
Sbjct: 229 ERAFRLKTAEIKHARLAMV 247


>sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21,
           chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1
          Length = 245

 Score =  117 bits (293), Expect = 5e-26
 Identities = 79/197 (40%), Positives = 97/197 (49%), Gaps = 3/197 (1%)
 Frame = +2

Query: 80  WYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNRVDSI 259
           W+PG   PA LDGS  GD+GFDPL LA   E                             
Sbjct: 48  WFPGQPRPAHLDGSSPGDFGFDPLGLATVPE----------------------------- 78

Query: 260 TNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGK-VELVEG 436
                           +RF+E E+ H RWAML   G L  EA     W  A +   L +G
Sbjct: 79  --------------NFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAALPDG 124

Query: 437 -ATYFGLPLPF-SISTLVWIEALVIGYIEFQRNGELDPEKRLYPGGKFFDPLGLASDPEK 610
            ATY G P+P+ ++ T++ IE L I + E QR  E DPEK+ YPGG F DPLG + DP K
Sbjct: 125 QATYLGNPVPWGNLPTILAIEFLAIAFAEQQRTMEKDPEKKKYPGGAF-DPLGFSKDPAK 183

Query: 611 KEVLKLAEIKHARLAMV 661
            E LKL EIK+ RLAM+
Sbjct: 184 FEELKLKEIKNGRLAML 200


>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A,
           chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1
          Length = 246

 Score =  116 bits (291), Expect = 9e-26
 Identities = 76/197 (38%), Positives = 101/197 (51%), Gaps = 3/197 (1%)
 Frame = +2

Query: 80  WYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNRVDSI 259
           W PG   P++LDGS  GD+GFD L L                       GE+  N     
Sbjct: 49  WMPGQPRPSYLDGSAPGDFGFDSLGL-----------------------GEVPAN----- 80

Query: 260 TNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVELVEG- 436
                          L+R++E ELIH RWAMLA  G +  EA     W  A +   + G 
Sbjct: 81  ---------------LERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWAAIPGG 125

Query: 437 -ATYFGLPLPF-SISTLVWIEALVIGYIEFQRNGELDPEKRLYPGGKFFDPLGLASDPEK 610
            ATY G P+P+ ++ T++ IE L I ++E QR+ E D EK+ YPGG  FDPLG + DP K
Sbjct: 126 QATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDSEKKKYPGGA-FDPLGYSKDPAK 184

Query: 611 KEVLKLAEIKHARLAMV 661
            E LK+ EIK+ RLA++
Sbjct: 185 FEELKVKEIKNGRLALL 201


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
           chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 261

 Score =  112 bits (281), Expect = 1e-24
 Identities = 81/232 (34%), Positives = 102/232 (43%), Gaps = 38/232 (16%)
 Frame = +2

Query: 80  WYPGCK------PPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIG 241
           W P  K       P WLDGSL GD+GFDPL L K   +L++                   
Sbjct: 60  WIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKW------------------- 100

Query: 242 NRVDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKV 421
                                   +RE ELIHGRWAMLA LG    +A+TG+ W +AG  
Sbjct: 101 ------------------------YREAELIHGRWAMLAVLGIFVGQAWTGIPWFEAGAD 136

Query: 422 ELVEGATYFGLPLPFSISTLVWIEALVIGYIEFQRNGE-LDPEKRL-------------- 556
                    G   PFS  TL+  + L++G++E +R  +  DP+ +               
Sbjct: 137 P--------GAVAPFSFGTLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWSRTAENF 188

Query: 557 --------YPGGKFFDPLGLAS---------DPEKKEVLKLAEIKHARLAMV 661
                   YPGGKFFDPL LA          D +K E LKLAEIKHARLAM+
Sbjct: 189 SNSTGEQGYPGGKFFDPLSLAGTISNGVYNPDTDKLERLKLAEIKHARLAML 240


>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
           chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
           SV=1
          Length = 256

 Score =  108 bits (270), Expect = 3e-23
 Identities = 76/219 (34%), Positives = 98/219 (44%), Gaps = 32/219 (14%)
 Frame = +2

Query: 101 PAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNRVDSITNINATI 280
           P WLDGSL GDYGFDPL L K   +L++                                
Sbjct: 68  PEWLDGSLPGDYGFDPLGLGKDPAFLKW-------------------------------- 95

Query: 281 QPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVELVEGATYFGLPL 460
                      +RE ELIHGRWAM A LG    +A++G+ W +AG           G   
Sbjct: 96  -----------YREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGADP--------GAIA 136

Query: 461 PFSISTLVWIEALVIGYIEFQRNGE-LDPEKRL----------------------YPGGK 571
           PFS  TL+  + +++G++E +R  +  DP+ +                       YPGGK
Sbjct: 137 PFSFGTLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTAENFANFTGEQGYPGGK 196

Query: 572 FFDPLGLAS---------DPEKKEVLKLAEIKHARLAMV 661
           FFDPL LA          D EK E LK+AEIKHARLAM+
Sbjct: 197 FFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHARLAML 235


>sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B,
           chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3
           SV=1
          Length = 256

 Score =  104 bits (260), Expect = 4e-22
 Identities = 77/232 (33%), Positives = 99/232 (42%), Gaps = 38/232 (16%)
 Frame = +2

Query: 80  WYPGCKP------PAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIG 241
           W P  K       P WLDGSL GD+GFDPL L K   +L++                   
Sbjct: 55  WIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKW------------------- 95

Query: 242 NRVDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKV 421
                                   +RE ELIHGRWAM A LG    +A++G+ W +AG  
Sbjct: 96  ------------------------YREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGAD 131

Query: 422 ELVEGATYFGLPLPFSISTLVWIEALVIGYIEFQR-----------------------NG 532
                    G   PFS  +L+  + L++G++E +R                       N 
Sbjct: 132 P--------GAIAPFSFGSLLGTQLLLMGWVESKRWVDFFDNDSQSIDWATPWSKTAENF 183

Query: 533 ELDPEKRLYPGGKFFDPLGLAS---------DPEKKEVLKLAEIKHARLAMV 661
                ++ YPGGKFFDPL LA          D EK E LKLAEIKH+RLAM+
Sbjct: 184 ANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKLAEIKHSRLAML 235


>sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26,
           chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1
          Length = 280

 Score = 89.7 bits (221), Expect = 1e-17
 Identities = 69/198 (34%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
 Frame = +2

Query: 101 PAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNRVDSITNINATI 280
           P +L+G + GDYG+DP  L K  E           N AK                     
Sbjct: 82  PEYLNGEVAGDYGYDPFGLGKKPE-----------NFAK--------------------- 109

Query: 281 QPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTG--------VTWQDAGKVELVEG 436
                      ++  ELIH RWAML   G +  EA             W   G + L++G
Sbjct: 110 -----------YQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGAL-LLDG 157

Query: 437 AT--YFGLPLPFSISTLVWIEALVIGYIEFQR--NGELDPEKRLYPGGKFFDPLGLASDP 604
            T  YFG  +P ++   V  E +++G  E+ R  NG LD E +L+PGG F DPLGLA DP
Sbjct: 158 NTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNG-LDFEDKLHPGGPF-DPLGLAKDP 215

Query: 605 EKKEVLKLAEIKHARLAM 658
           E+  +LK+ EIK+ RLAM
Sbjct: 216 EQGALLKVKEIKNGRLAM 233
tr_hit_id B7FIZ5
Definition tr|B7FIZ5|B7FIZ5_MEDTR Putative uncharacterized protein OS=Medicago truncatula
Align length 198
Score (bit) 330.0
E-value 4.0e-89
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912954|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_G04.
         (662 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B7FIZ5|B7FIZ5_MEDTR Putative uncharacterized protein OS=Medic...   330   4e-89
tr|Q9XQB2|Q9XQB2_PHAAU Chlorophyll a/b binding protein CP29 OS=P...   328   1e-88
tr|A7PP40|A7PP40_VITVI Chromosome chr8 scaffold_23, whole genome...   328   1e-88
tr|A5C288|A5C288_VITVI Putative uncharacterized protein OS=Vitis...   328   1e-88
tr|A9PIZ2|A9PIZ2_POPJC Putative uncharacterized protein OS=Popul...   326   9e-88
tr|Q6Z411|Q6Z411_ORYSJ Os07g0558400 protein OS=Oryza sativa subs...   324   3e-87
tr|O65217|O65217_ORYSA Chlorophyll a/b-binding protein OS=Oryza ...   324   3e-87
tr|A2YML1|A2YML1_ORYSI Putative uncharacterized protein OS=Oryza...   324   3e-87
tr|Q0WW97|Q0WW97_ARATH Lhcb4-protein OS=Arabidopsis thaliana GN=...   324   3e-87
tr|Q0PWS7|Q0PWS7_TOBAC Chloroplast pigment-binding protein CP29 ...   322   1e-86
tr|O24561|O24561_MAIZE Putative uncharacterized protein OS=Zea m...   322   2e-86
tr|A9PJF0|A9PJF0_POPJC Putative uncharacterized protein OS=Popul...   320   5e-86
tr|A9U3M1|A9U3M1_PHYPA Predicted protein OS=Physcomitrella paten...   318   1e-85
tr|B4FJG1|B4FJG1_MAIZE Putative uncharacterized protein OS=Zea m...   318   2e-85
tr|B7SB30|B7SB30_BAMOL LHCB4 OS=Bambusa oldhamii PE=2 SV=1            316   7e-85
tr|B7SAW1|B7SAW1_9POAL Chloroplast chlorophyll a/b binding prote...   315   1e-84
tr|A9T2F8|A9T2F8_PHYPA Predicted protein OS=Physcomitrella paten...   315   2e-84
tr|A9PK34|A9PK34_POPJC Putative uncharacterized protein OS=Popul...   312   1e-83
tr|A9NKX0|A9NKX0_PICSI Putative uncharacterized protein OS=Picea...   296   8e-79
tr|A9P071|A9P071_PICSI Putative uncharacterized protein OS=Picea...   295   2e-78
tr|A9NYR8|A9NYR8_PICSI Putative uncharacterized protein OS=Picea...   294   3e-78
tr|A3BL40|A3BL40_ORYSJ Putative uncharacterized protein OS=Oryza...   278   2e-73
tr|A4QPJ4|A4QPJ4_ACEAT Chloroplast light-harvesting protein CP29...   227   6e-58
tr|Q7XYQ5|Q7XYQ5_BIGNA Chlorophyll a/b-binding protein CP29 OS=B...   224   3e-57
tr|B5A4H8|B5A4H8_GYMST Chlorophyll a/b binding protein CP29 OS=G...   224   5e-57
tr|A8J6D1|A8J6D1_CHLRE Chlorophyll a-b binding protein of photos...   223   8e-57
tr|A2SY49|A2SY49_CHLIN Light-harvesting chlorophyll-a/b binding ...   223   8e-57
tr|A2SY24|A2SY24_MESVI Light-harvesting chlorophyll-a/b binding ...   213   8e-54
tr|Q3B9U8|Q3B9U8_OSTTA Chloroplast chlorophyll a/b-binding prote...   211   2e-53
tr|A4S8L5|A4S8L5_OSTLU Possibly CP29, chlorophyll a/b binding OS...   208   2e-52

>tr|B7FIZ5|B7FIZ5_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 289

 Score =  330 bits (847), Expect = 4e-89
 Identities = 158/198 (79%), Positives = 169/198 (85%)
 Frame = +2

Query: 68  DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 247
           DRPLW+PG K P WLDGSLVGDYGFDP  L KPAEYLQFD DSL+QNLAKN AG++IG R
Sbjct: 53  DRPLWFPGAKSPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLAGDVIGTR 112

Query: 248 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVEL 427
            +     +   QPY+E FGLQRFRECELIHGRWAMLATLGAL VE  TGVTWQDAGKVEL
Sbjct: 113 TEFADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVEL 172

Query: 428 VEGATYFGLPLPFSISTLVWIEALVIGYIEFQRNGELDPEKRLYPGGKFFDPLGLASDPE 607
           VEG+TY G PLPFSI+TL+WIE LVIGYIEFQRN ELD EKRLYPGGKFFDPLGLASDPE
Sbjct: 173 VEGSTYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPE 232

Query: 608 KKEVLKLAEIKHARLAMV 661
           KK  L+LAEIKHARLAMV
Sbjct: 233 KKATLQLAEIKHARLAMV 250


>tr|Q9XQB2|Q9XQB2_PHAAU Chlorophyll a/b binding protein CP29
           OS=Phaseolus aureus GN=CipCp29 PE=2 SV=1
          Length = 290

 Score =  328 bits (842), Expect = 1e-88
 Identities = 157/198 (79%), Positives = 169/198 (85%)
 Frame = +2

Query: 68  DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 247
           DRPLWYPG K P WLDGSLVGDYGFDP  L KPAEYLQF+ DSL+QNLAKN AG IIG R
Sbjct: 53  DRPLWYPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNEAGIIIGTR 112

Query: 248 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVEL 427
            +     +   QPY+E FGLQRFRECELIHGRWAMLATLGAL+VE  TGVTWQDAGKVEL
Sbjct: 113 TEVADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVEL 172

Query: 428 VEGATYFGLPLPFSISTLVWIEALVIGYIEFQRNGELDPEKRLYPGGKFFDPLGLASDPE 607
           VEG++Y G PLPFSI+TL+WIE LVIGYIEFQRN ELDPEKRLYPGG +FDPLGLASDPE
Sbjct: 173 VEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPE 232

Query: 608 KKEVLKLAEIKHARLAMV 661
           KK  L+LAEIKHARLAMV
Sbjct: 233 KKATLQLAEIKHARLAMV 250


>tr|A7PP40|A7PP40_VITVI Chromosome chr8 scaffold_23, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00021499001
           PE=4 SV=1
          Length = 342

 Score =  328 bits (842), Expect = 1e-88
 Identities = 153/198 (77%), Positives = 172/198 (86%)
 Frame = +2

Query: 68  DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 247
           DRPLW+PG   P WLDG+LVGDYGFDP  L KPAEYLQ+D+DSL+QNLAKN AG++IG R
Sbjct: 106 DRPLWFPGAVAPEWLDGTLVGDYGFDPFGLGKPAEYLQYDYDSLDQNLAKNIAGDVIGTR 165

Query: 248 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVEL 427
            +     +   QPY E FGLQRFRECELIHGRWAMLATLGALAVE+ TGVTWQDAGKVEL
Sbjct: 166 FEGGEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVEL 225

Query: 428 VEGATYFGLPLPFSISTLVWIEALVIGYIEFQRNGELDPEKRLYPGGKFFDPLGLASDPE 607
           +EG++Y G PLPFS++TL+WIE LVIGYIEFQRN ELDPEKRLYPGGKFFDPLGLA+DPE
Sbjct: 226 IEGSSYLGQPLPFSMTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAADPE 285

Query: 608 KKEVLKLAEIKHARLAMV 661
           KK VL+LAEIKHARLAM+
Sbjct: 286 KKAVLQLAEIKHARLAMI 303


>tr|A5C288|A5C288_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_010727 PE=4 SV=1
          Length = 288

 Score =  328 bits (842), Expect = 1e-88
 Identities = 153/198 (77%), Positives = 172/198 (86%)
 Frame = +2

Query: 68  DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 247
           DRPLW+PG   P WLDG+LVGDYGFDP  L KPAEYLQ+D+DSL+QNLAKN AG++IG R
Sbjct: 52  DRPLWFPGAVAPEWLDGTLVGDYGFDPFGLGKPAEYLQYDYDSLDQNLAKNIAGDVIGTR 111

Query: 248 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVEL 427
            +     +   QPY E FGLQRFRECELIHGRWAMLATLGALAVE+ TGVTWQDAGKVEL
Sbjct: 112 FEGGEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVEL 171

Query: 428 VEGATYFGLPLPFSISTLVWIEALVIGYIEFQRNGELDPEKRLYPGGKFFDPLGLASDPE 607
           +EG++Y G PLPFS++TL+WIE LVIGYIEFQRN ELDPEKRLYPGGKFFDPLGLA+DPE
Sbjct: 172 IEGSSYLGQPLPFSMTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAADPE 231

Query: 608 KKEVLKLAEIKHARLAMV 661
           KK VL+LAEIKHARLAM+
Sbjct: 232 KKAVLQLAEIKHARLAMI 249


>tr|A9PIZ2|A9PIZ2_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 285

 Score =  326 bits (835), Expect = 9e-88
 Identities = 155/198 (78%), Positives = 171/198 (86%)
 Frame = +2

Query: 68  DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 247
           DRPLWYPG K P +LDGSLVGDYGFDP  L KPAEYLQF+ DSL+QNLAKN AG+IIG R
Sbjct: 50  DRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNLAGDIIGTR 109

Query: 248 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVEL 427
            +     +   QPY+E FGLQRFRECELIHGRWAMLATLGAL+VE  TGVTWQDAGKVEL
Sbjct: 110 TEFADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVEL 169

Query: 428 VEGATYFGLPLPFSISTLVWIEALVIGYIEFQRNGELDPEKRLYPGGKFFDPLGLASDPE 607
           VEG++Y G PLPFSI+ L+WIEA++IGYIEFQRN ELDPEKRLYPGG+FFDPLGLASDPE
Sbjct: 170 VEGSSYLGQPLPFSITALIWIEAVIIGYIEFQRNAELDPEKRLYPGGQFFDPLGLASDPE 229

Query: 608 KKEVLKLAEIKHARLAMV 661
           KK  L+LAEIKHARLAMV
Sbjct: 230 KKATLQLAEIKHARLAMV 247


>tr|Q6Z411|Q6Z411_ORYSJ Os07g0558400 protein OS=Oryza sativa subsp.
           japonica GN=P0567H04.14 PE=2 SV=1
          Length = 290

 Score =  324 bits (831), Expect = 3e-87
 Identities = 156/198 (78%), Positives = 171/198 (86%)
 Frame = +2

Query: 68  DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 247
           DRPLW+PG   P +LDGSLVGDYGFDP  L KPAEYLQF+ DSL+QNLAKN+AGEIIG R
Sbjct: 53  DRPLWFPGAVAPDYLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNNAGEIIGTR 112

Query: 248 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVEL 427
            ++    +   QPY E FGLQRFRECELIHGRWAMLATLGAL+VE  TGVTWQDAGKVEL
Sbjct: 113 FETGEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVEL 172

Query: 428 VEGATYFGLPLPFSISTLVWIEALVIGYIEFQRNGELDPEKRLYPGGKFFDPLGLASDPE 607
           V+G++Y G PLPFSISTL+WIE LVIGYIEFQRN ELDPEKRLYPGG +FDPLGLASDPE
Sbjct: 173 VDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPE 232

Query: 608 KKEVLKLAEIKHARLAMV 661
           KKE L+LAEIKHARLAMV
Sbjct: 233 KKERLQLAEIKHARLAMV 250


>tr|O65217|O65217_ORYSA Chlorophyll a/b-binding protein OS=Oryza
           sativa GN=RCABP69 PE=2 SV=1
          Length = 290

 Score =  324 bits (831), Expect = 3e-87
 Identities = 156/198 (78%), Positives = 171/198 (86%)
 Frame = +2

Query: 68  DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 247
           DRPLW+PG   P +LDGSLVGDYGFDP  L KPAEYLQF+ DSL+QNLAKN+AGEIIG R
Sbjct: 53  DRPLWFPGAVAPDYLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNNAGEIIGTR 112

Query: 248 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVEL 427
            ++    +   QPY E FGLQRFRECELIHGRWAMLATLGAL+VE  TGVTWQDAGKVEL
Sbjct: 113 FETGEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVEL 172

Query: 428 VEGATYFGLPLPFSISTLVWIEALVIGYIEFQRNGELDPEKRLYPGGKFFDPLGLASDPE 607
           V+G++Y G PLPFSISTL+WIE LVIGYIEFQRN ELDPEKRLYPGG +FDPLGLASDPE
Sbjct: 173 VDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPE 232

Query: 608 KKEVLKLAEIKHARLAMV 661
           KKE L+LAEIKHARLAMV
Sbjct: 233 KKERLQLAEIKHARLAMV 250


>tr|A2YML1|A2YML1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_26463 PE=4 SV=1
          Length = 290

 Score =  324 bits (831), Expect = 3e-87
 Identities = 156/198 (78%), Positives = 171/198 (86%)
 Frame = +2

Query: 68  DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 247
           DRPLW+PG   P +LDGSLVGDYGFDP  L KPAEYLQF+ DSL+QNLAKN+AGEIIG R
Sbjct: 53  DRPLWFPGAVAPDYLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNNAGEIIGTR 112

Query: 248 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVEL 427
            ++    +   QPY E FGLQRFRECELIHGRWAMLATLGAL+VE  TGVTWQDAGKVEL
Sbjct: 113 FETGEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVEL 172

Query: 428 VEGATYFGLPLPFSISTLVWIEALVIGYIEFQRNGELDPEKRLYPGGKFFDPLGLASDPE 607
           V+G++Y G PLPFSISTL+WIE LVIGYIEFQRN ELDPEKRLYPGG +FDPLGLASDPE
Sbjct: 173 VDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPE 232

Query: 608 KKEVLKLAEIKHARLAMV 661
           KKE L+LAEIKHARLAMV
Sbjct: 233 KKERLQLAEIKHARLAMV 250


>tr|Q0WW97|Q0WW97_ARATH Lhcb4-protein OS=Arabidopsis thaliana
           GN=At5g01530 PE=2 SV=1
          Length = 290

 Score =  324 bits (830), Expect = 3e-87
 Identities = 154/198 (77%), Positives = 169/198 (85%)
 Frame = +2

Query: 68  DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 247
           DRPLWYPG   P WLDGSLVGDYGFDP  L KPAEYLQFD DSL+QNLAKN AG++IG R
Sbjct: 54  DRPLWYPGAISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTR 113

Query: 248 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVEL 427
            ++    +   QPY+E FG+QRFRECELIHGRWAMLATLGAL+VE  TGVTWQDAGKVEL
Sbjct: 114 TEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVEL 173

Query: 428 VEGATYFGLPLPFSISTLVWIEALVIGYIEFQRNGELDPEKRLYPGGKFFDPLGLASDPE 607
           V+G++Y G PLPFSISTL+WIE LVIGYIEFQRN ELD EKRLYPGGKFFDPLGLA+DPE
Sbjct: 174 VDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPE 233

Query: 608 KKEVLKLAEIKHARLAMV 661
           K   L+LAEIKHARLAMV
Sbjct: 234 KTAQLQLAEIKHARLAMV 251


>tr|Q0PWS7|Q0PWS7_TOBAC Chloroplast pigment-binding protein CP29
           OS=Nicotiana tabacum GN=Lhcb4 PE=2 SV=1
          Length = 285

 Score =  322 bits (825), Expect = 1e-86
 Identities = 155/199 (77%), Positives = 169/199 (84%), Gaps = 1/199 (0%)
 Frame = +2

Query: 68  DRPLWYPGCKPPAWLDGSLVGDYGFDPLSLAKPAEYLQFDFDSLNQNLAKNSAGEIIGNR 247
           DRPLWYPG K P +LDGSLVGDYGFDP  L KPAEYLQFD DSL+QNLAKN AG++IG R
Sbjct: 47  DRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLAGDVIGTR 106

Query: 248 VDSITNINATIQPYAEAFGLQRFRECELIHGRWAMLATLGALAVEAFTGVTWQDAGKVEL 427
            +     +   QPY+E FGLQRFRECELIHGRWAMLATLGAL VE  TG+TWQDAGKVEL
Sbjct: 107 TELADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVEL 166

Query: 428 VEGATYFGLPLPFSISTLVWIEALVIGYI-EFQRNGELDPEKRLYPGGKFFDPLGLASDP 604
           VEG++Y G PLPFSI+TL+WIE LVIGYI EFQRN ELDPEKRLYPGG FFDPLGLA+DP
Sbjct: 167 VEGSSYLGQPLPFSITTLIWIEVLVIGYIVEFQRNAELDPEKRLYPGGSFFDPLGLAADP 226

Query: 605 EKKEVLKLAEIKHARLAMV 661
           EKK  L+LAEIKHARLAMV
Sbjct: 227 EKKATLQLAEIKHARLAMV 245