BP912957 |
Clone id |
YMU001_000024_G07 |
Library |
YMU01 |
Length |
508 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000024_G07. |
Accession |
BP912957 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL328Contig1 |
Sequence |
GGACACCTGTCCGAGAGTTGTAGTAGCACGAGCATTCCCATATCAGGTGCAACATCCACT TTGGTAAACTGATTGTATGTGGGCAGTGGTATCATATGCCCTTGCCCCGTATGCTTCTCT GCCCAATTCTTAGTTCTCCAAAATTGTAGCTGCTTCTGCAACTTCTTCATTCTCTCCAAT AAATCCTTCACATCGACAGCTTGATAATCACGTGCTTGGAGAGCCTCAACATCACAATCC TCCAGTGATAGAATTGCAACATCATCAGTCTGCACGATTTCGTCTTTGCTCACTTCAGCG GCCAGCCTCCGAGACTTTCTTTTTGCTTTAGGCAGAACTTGTACAGATGCCGAATCAGAC GGTTTCACGTCTAACACATTTATAGAGACCTTAGGTATGATTAGTTTGTTCTCGACACTG ACAAAATCACTTTCACTTTTAGAGGATCTTGAAGGCTCTGAGAAAATGGGCCTTCCCTCC ACTGATTGTCCTTTTGTATCAGAGCTCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q07E28 |
Definition |
sp|Q07E28|CTTB2_NEONE Cortactin-binding protein 2 OS=Neofelis nebulosa |
Align length |
95 |
Score (bit) |
32.0 |
E-value |
1.7 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912957|Adiantum capillus-veneris mRNA, clone: YMU001_000024_G07. (508 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q07E28|CTTB2_NEONE Cortactin-binding protein 2 OS=Neofelis ne... 32 1.7 sp|Q9QVP9|FAK2_MOUSE Protein tyrosine kinase 2 beta OS=Mus muscu... 32 2.2 sp|A9FD62|LIPA_SORC5 Lipoyl synthase OS=Sorangium cellulosum (st... 31 2.9 sp|P70600|FAK2_RAT Protein tyrosine kinase 2 beta OS=Rattus norv... 31 2.9 sp|Q8CWX7|UVRB_STRMU UvrABC system protein B OS=Streptococcus mu... 31 3.8 sp|Q14289|FAK2_HUMAN Protein tyrosine kinase 2 beta OS=Homo sapi... 31 3.8 sp|Q7T019|DZIP1_DANRE Zinc finger protein Dzip1 OS=Danio rerio G... 30 4.9 sp|Q2QLA2|CTTB2_HORSE Cortactin-binding protein 2 OS=Equus cabal... 30 4.9 sp|A0M8T5|CTTB2_FELCA Cortactin-binding protein 2 OS=Felis silve... 30 4.9 sp|P34496|YNA1_CAEEL Uncharacterized protein PAR2.1 OS=Caenorhab... 30 5.0 sp|P28565|5HT1D_RAT 5-hydroxytryptamine receptor 1D OS=Rattus no... 30 5.0 sp|Q61224|5HT1D_MOUSE 5-hydroxytryptamine receptor 1D OS=Mus mus... 30 5.0 sp|Q9I7U4|TITIN_DROME Titin OS=Drosophila melanogaster GN=sls PE... 30 6.5 sp|O95202|LETM1_HUMAN LETM1 and EF-hand domain-containing protei... 30 6.5 sp|Q08156|KIT_CHICK Mast/stem cell growth factor receptor OS=Gal... 30 6.5 sp|Q07E41|CTTB2_DASNO Cortactin-binding protein 2 OS=Dasypus nov... 30 6.5 sp|Q7M3Y8|TPM_TURCO Tropomyosin (Fragments) OS=Turbo cornutus PE... 30 8.4 sp|O74760|EIF3A_SCHPO Probable eukaryotic translation initiation... 30 8.4 sp|Q09YI1|CTTB2_SHEEP Cortactin-binding protein 2 OS=Ovis aries ... 30 8.4 sp|Q07DW4|CTTB2_MUNRE Cortactin-binding protein 2 OS=Muntiacus r... 30 8.4 sp|Q09YJ3|CTTB2_MUNMU Cortactin-binding protein 2 OS=Muntiacus m... 30 8.4 sp|Q2KJ21|CACO1_BOVIN Calcium-binding and coiled-coil domain-con... 30 8.4 sp|Q9LET0|BH107_ARATH Putative transcription factor bHLH107 OS=A... 30 8.4
>sp|Q07E28|CTTB2_NEONE Cortactin-binding protein 2 OS=Neofelis nebulosa GN=CTTNBP2 PE=3 SV=1 Length = 1658
Score = 32.0 bits (71), Expect = 1.7 Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 4/95 (4%) Frame = -3
Query: 416 VENKLIIPKVSINVLDVKPSDSASVQVLPKAKRKSRRLAAEVSKDEIVQTDDVAILSLED 237 +E + +V + + + K SA + L KR+S + A++ K LS D Sbjct: 186 IEEAQKLEEVMVKLEEEKTKTSALEEELSAEKRRSTEMEAQMEKQ----------LSEFD 235
Query: 236 CDVEALQAR----DYQAVDVKDLLERMKKLQKQLQ 144 + E L+A+ + D+K+ +++MKK+ +QL+ Sbjct: 236 TEREQLRAKLHREEAHTTDLKEEIDKMKKMIEQLK 270
>sp|Q9QVP9|FAK2_MOUSE Protein tyrosine kinase 2 beta OS=Mus musculus GN=Ptk2b PE=1 SV=1 Length = 1009
Score = 31.6 bits (70), Expect = 2.2 Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 2/79 (2%) Frame = -3
Query: 404 LIIPKVSINVLDVKPSDSASVQVLPKAKRK--SRRLAAEVSKDEIVQTDDVAILSLEDCD 231 L + K+ +V D+ PS AS + + +K ++ LA ++K ++ Q + V LS EDC Sbjct: 915 LNLRKLIGSVDDLLPSLPASSRTEIEGTQKLLNKDLAELINKMKLAQQNAVTSLS-EDCK 973
Query: 230 VEALQARDYQAVDVKDLLE 174 + L A AVD K+LL+ Sbjct: 974 RQMLTASHTLAVDAKNLLD 992
>sp|A9FD62|LIPA_SORC5 Lipoyl synthase OS=Sorangium cellulosum (strain So ce56) GN=lipA PE=3 SV=1 Length = 372
Score = 31.2 bits (69), Expect = 2.9 Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 4/135 (2%) Frame = -3
Query: 422 VSVENKLIIPKVSINVLDVKPSDSASVQVLPKAKRKSRRLAAEVSKDEIVQ----TDDVA 255 V N ++ +++ + DV+ S S+ VL +AK + RRLAA+ ++ T Sbjct: 159 VFAHNVEVVRRITRVIRDVRSSYDQSLAVLRRAKERQRRLAADAAEAGAPAPRRLTKSSI 218
Query: 254 ILSLEDCDVEALQARDYQAVDVKDLLERMKKLQKQLQFWRTKNWAEKHTGQGHMIPLPTY 75 ++ + + D E L+A ++DL E + Q+ R + KH + T+ Sbjct: 219 MVGIGETDDEVLEA-------LRDLREAGVDIVTIGQYLRP---SSKHAPVQRFVEPETF 268
Query: 74 NQFTKVDVAPDMGML 30 F + A +MG L Sbjct: 269 AAFER--AALEMGFL 281
>sp|P70600|FAK2_RAT Protein tyrosine kinase 2 beta OS=Rattus norvegicus GN=Ptk2b PE=1 SV=1 Length = 1009
Score = 31.2 bits (69), Expect = 2.9 Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Frame = -3
Query: 404 LIIPKVSINVLDVKPSDSASVQVLPKAKRK--SRRLAAEVSKDEIVQTDDVAILSLEDCD 231 L + K+ +V D+ PS AS + + +K ++ LA ++K + Q + V LS EDC Sbjct: 915 LNLRKLIGSVDDLLPSLPASSRTEIEGTQKLLNKDLAELINKMRLAQQNAVTSLS-EDCK 973
Query: 230 VEALQARDYQAVDVKDLLE 174 + L A AVD K+LL+ Sbjct: 974 RQMLTASHTLAVDAKNLLD 992
>sp|Q8CWX7|UVRB_STRMU UvrABC system protein B OS=Streptococcus mutans GN=uvrB PE=3 SV=1 Length = 663
Score = 30.8 bits (68), Expect = 3.8 Identities = 18/41 (43%), Positives = 25/41 (60%) Frame = -3
Query: 266 DDVAILSLEDCDVEALQARDYQAVDVKDLLERMKKLQKQLQ 144 D +AI D +V A +A DY A+ + E +KKLQKQ+Q Sbjct: 599 DLIAITKANDSEV-AEEAVDYNAMTKSERQEAIKKLQKQMQ 638
>sp|Q14289|FAK2_HUMAN Protein tyrosine kinase 2 beta OS=Homo sapiens GN=PTK2B PE=1 SV=2 Length = 1009
Score = 30.8 bits (68), Expect = 3.8 Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 2/79 (2%) Frame = -3
Query: 404 LIIPKVSINVLDVKPS--DSASVQVLPKAKRKSRRLAAEVSKDEIVQTDDVAILSLEDCD 231 L + K+ +V D+ PS S+ ++ K ++ LA ++K + Q + V LS E+C Sbjct: 915 LTLRKLIGSVDDLLPSLPSSSRTEIEGTQKLLNKDLAELINKMRLAQQNAVTSLS-EECK 973
Query: 230 VEALQARDYQAVDVKDLLE 174 + L A AVD K+LL+ Sbjct: 974 RQMLTASHTLAVDAKNLLD 992
>sp|Q7T019|DZIP1_DANRE Zinc finger protein Dzip1 OS=Danio rerio GN=dzip1 PE=2 SV=2 Length = 898
Score = 30.4 bits (67), Expect = 4.9 Identities = 10/28 (35%), Positives = 20/28 (71%) Frame = -3
Query: 218 QARDYQAVDVKDLLERMKKLQKQLQFWR 135 Q +DY A K+L++R ++ ++QL+ W+ Sbjct: 272 QQKDYTAKQEKELIQRQEEFKRQLEIWK 299
>sp|Q2QLA2|CTTB2_HORSE Cortactin-binding protein 2 OS=Equus caballus GN=CTTNBP2 PE=3 SV=1 Length = 1665
Score = 30.4 bits (67), Expect = 4.9 Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 4/95 (4%) Frame = -3
Query: 416 VENKLIIPKVSINVLDVKPSDSASVQVLPKAKRKSRRLAAEVSKDEIVQTDDVAILSLED 237 +E + +V + + K SA + L KR+S + A++ K LS D Sbjct: 186 IEEAQKLEEVMAKLEEEKKKTSALEEELSAEKRRSTEMEAQMEKQ----------LSEFD 235
Query: 236 CDVEALQAR----DYQAVDVKDLLERMKKLQKQLQ 144 + E L+A+ + D+K+ +++MKK+ +QL+ Sbjct: 236 TEREQLRAKLHREEAHTTDLKEEIDKMKKMIEQLK 270
>sp|A0M8T5|CTTB2_FELCA Cortactin-binding protein 2 OS=Felis silvestris catus GN=CTTNBP2 PE=3 SV=1 Length = 1658
Score = 30.4 bits (67), Expect = 4.9 Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 4/95 (4%) Frame = -3
Query: 416 VENKLIIPKVSINVLDVKPSDSASVQVLPKAKRKSRRLAAEVSKDEIVQTDDVAILSLED 237 +E + +V + + K SA + L KR+S + A++ K LS D Sbjct: 186 IEEAQKLEEVMAKLEEEKTKTSALEEELSAEKRRSTEMEAQMEKQ----------LSEFD 235
Query: 236 CDVEALQAR----DYQAVDVKDLLERMKKLQKQLQ 144 + E L+A+ + D+K+ +++MKK+ +QL+ Sbjct: 236 TEREQLRAKLHREEAHTTDLKEEIDKMKKMIEQLK 270
>sp|P34496|YNA1_CAEEL Uncharacterized protein PAR2.1 OS=Caenorhabditis elegans GN=PAR2.1 PE=1 SV=2 Length = 170
Score = 30.4 bits (67), Expect = 5.0 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = +2
Query: 137 SKIVAASATSSFSPINPSHRQLDNHVLGEPQHHNP 241 S + S TS + PS +++D+ +PQHHNP Sbjct: 11 STVRCMSLTSKMAAEQPSKQEVDDLFAEKPQHHNP 45
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A4Y1N6 |
Definition |
tr|A4Y1N6|A4Y1N6_SHEPC Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) |
Align length |
59 |
Score (bit) |
37.0 |
E-value |
0.55 |
Report |
|