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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912964
Clone id YMU001_000024_H02
Library
Length 586
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000024_H02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTTTTTTTTTTTCATACAAACTTGCACTGCGGTCCTTGTTCCTCCTTCAATATAACTTC
CAACACACACAAAAATATTACATTTCACTATAACTACGACAAACAAGGATACACAGACTG
GCAAATATCCTTGCAACAAATGGGGTGGGAAGATGCTAATTTATTCACTTTGAGCAGGCT
TCCAACCACTCTCGTTTTGAGAACGGCATGAGGGAGACCTTTCTAATGTACATCAACACT
CCAACCTTCCGAGAGTGGCTCCAATGCAGGCATCTATAAAATCATCCTCAATAAAATCAG
AAGACAAGATTTGCAGGTAGTCACCTAGACCCCTCTTGTAGGCTTGAGAAATGAAGAGTC
GGACGTACGGTTGTATGCGCGAGGTCACTGGCTTCACGCATGCAACCGCACTGCTAGCCT
GTGGAGTGCACGTATTCTCGACCCTGTAAAAATAACATCTCTCATCTGCTGGTGGTTGGT
TAGCCAAAAAGCACAAATTGCTCATGAATTTGGTGTACGGCAAATCGGTATCTATCCAAT
TGTCTCTCAGATATTGTCCGCTCCACAGCGGGCTACATGCCAATGG
■■Homology search results ■■ -
sp_hit_id Q19KC1
Definition sp|Q19KC1|NIP21_MAIZE Aquaporin NIP2-1 OS=Zea mays
Align length 33
Score (bit) 30.8
E-value 5.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912964|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_H02.
         (573 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q19KC1|NIP21_MAIZE Aquaporin NIP2-1 OS=Zea mays GN=NIP2-1 PE=...    31   5.1  
sp|Q8NA54|IQUB_HUMAN IQ and ubiquitin-like domain-containing pro...    30   6.5  
sp|Q7VUE3|TYSY_BORPE Thymidylate synthase OS=Bordetella pertussi...    30   8.6  
sp|Q7W1A9|TYSY_BORPA Thymidylate synthase OS=Bordetella parapert...    30   8.6  
sp|Q7WP13|TYSY_BORBR Thymidylate synthase OS=Bordetella bronchis...    30   8.6  

>sp|Q19KC1|NIP21_MAIZE Aquaporin NIP2-1 OS=Zea mays GN=NIP2-1 PE=2
           SV=2
          Length = 295

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -1

Query: 141 IFPPHLLQGYLPVCVSLFVVVIVKCNIFVCVGS 43
           IFPPHLL+  +   VS F++V V C      GS
Sbjct: 40  IFPPHLLKKVVSEVVSTFLLVFVTCGAAGIYGS 72


>sp|Q8NA54|IQUB_HUMAN IQ and ubiquitin-like domain-containing
           protein OS=Homo sapiens GN=IQUB PE=1 SV=2
          Length = 791

 Score = 30.4 bits (67), Expect = 6.5
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -2

Query: 215 H*KGLPHAVLKTRVVGSLLKVNKLASSHPICCKDICQ 105
           H  G+PH+VL+ R  G +LK N+    H +  ++I Q
Sbjct: 163 HLLGIPHSVLQIRYSGKILKNNETLVQHGVKPQEIVQ 199


>sp|Q7VUE3|TYSY_BORPE Thymidylate synthase OS=Bordetella pertussis
           GN=thyA PE=3 SV=1
          Length = 323

 Score = 30.0 bits (66), Expect = 8.6
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = -1

Query: 228 EC*CTLERSPSCRSQNESGWKPAQSE*ISIFPPHLLQGYLP 106
           +C  T+ +SP  R     GW  AQ E +++ P HLL  +LP
Sbjct: 160 QCLDTIRQSPGDRRILFHGWNWAQIEEMALPPCHLLYQFLP 200


>sp|Q7W1A9|TYSY_BORPA Thymidylate synthase OS=Bordetella
           parapertussis GN=thyA PE=3 SV=1
          Length = 323

 Score = 30.0 bits (66), Expect = 8.6
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = -1

Query: 228 EC*CTLERSPSCRSQNESGWKPAQSE*ISIFPPHLLQGYLP 106
           +C  T+ +SP  R     GW  AQ E +++ P HLL  +LP
Sbjct: 160 QCLDTIHQSPGDRRILFHGWNWAQIEEMALPPCHLLYQFLP 200


>sp|Q7WP13|TYSY_BORBR Thymidylate synthase OS=Bordetella
           bronchiseptica GN=thyA PE=3 SV=1
          Length = 323

 Score = 30.0 bits (66), Expect = 8.6
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = -1

Query: 228 EC*CTLERSPSCRSQNESGWKPAQSE*ISIFPPHLLQGYLP 106
           +C  T+ +SP  R     GW  AQ E +++ P HLL  +LP
Sbjct: 160 QCLDTIHQSPGDRRILFHGWNWAQIEEMALPPCHLLYQFLP 200
tr_hit_id A9P0A2
Definition tr|A9P0A2|A9P0A2_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 116
Score (bit) 167.0
E-value 3.0e-40
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912964|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_H02.
         (573 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9P0A2|A9P0A2_PICSI Putative uncharacterized protein OS=Picea...   167   3e-40
tr|A9TWL1|A9TWL1_PHYPA Predicted protein OS=Physcomitrella paten...   153   7e-36
tr|Q69JZ2|Q69JZ2_ORYSJ Os09g0535900 protein OS=Oryza sativa subs...   152   1e-35
tr|A2Z3H3|A2Z3H3_ORYSI Putative uncharacterized protein OS=Oryza...   152   1e-35
tr|A9T2K2|A9T2K2_PHYPA Predicted protein OS=Physcomitrella paten...   152   2e-35
tr|B4G206|B4G206_MAIZE Putative uncharacterized protein OS=Zea m...   149   8e-35
tr|B4FUX3|B4FUX3_MAIZE Putative uncharacterized protein OS=Zea m...   149   8e-35
tr|Q9SW43|Q9SW43_ARATH Putative uncharacterized protein AT4g3492...   147   4e-34
tr|Q8S9L7|Q8S9L7_ARATH AT4g34920/F11I11_160 OS=Arabidopsis thali...   147   4e-34
tr|Q8L9W0|Q8L9W0_ARATH Putative uncharacterized protein OS=Arabi...   147   4e-34
tr|A9S723|A9S723_PHYPA Predicted protein OS=Physcomitrella paten...   145   1e-33
tr|A7P887|A7P887_VITVI Chromosome chr3 scaffold_8, whole genome ...   144   3e-33
tr|B7FIT0|B7FIT0_MEDTR Putative uncharacterized protein OS=Medic...   144   4e-33
tr|Q9SZP6|Q9SZP6_ARATH Putative uncharacterized protein F20M13.2...   142   1e-32
tr|Q9SW42|Q9SW42_ARATH Putative uncharacterized protein AT4g3493...   142   2e-32
tr|Q84RB9|Q84RB9_BETVU Ki1 protein OS=Beta vulgaris GN=Ki1 PE=2 ...   137   4e-31
tr|B8A0A9|B8A0A9_MAIZE Putative uncharacterized protein OS=Zea m...    54   8e-06
tr|B1EMC1|B1EMC1_9ESCH ATP-dependent helicase HrpB OS=Escherichi...    35   2.9  

>tr|A9P0A2|A9P0A2_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 318

 Score =  167 bits (424), Expect = 3e-40
 Identities = 80/116 (68%), Positives = 92/116 (79%)
 Frame = -1

Query: 573 PLACSPLWSGQYLRDNWIDTDLPYTKFMSNLCFLANQPPADERCYFYRVENTCTPQASSA 394
           P A SPLWS   L+D+WIDTDLPYTKF SN+  LANQPP   R YFYRVENT TPQA + 
Sbjct: 200 PAAGSPLWSSARLKDDWIDTDLPYTKFESNVKNLANQPPVSSRKYFYRVENTVTPQADNP 259

Query: 393 VACVKPVTSRIQPYVRLFISQAYKRGLGDYLQILSSDFIEDDFIDACIGATLGRLE 226
           + CVKPVT+RI+ Y RLFISQA+KRGL D LQ+LSSDFI+ DF+DACIG T  R+E
Sbjct: 260 ILCVKPVTNRIKRYGRLFISQAFKRGLADRLQVLSSDFIDTDFVDACIGVTRARME 315


>tr|A9TWL1|A9TWL1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_172386 PE=4 SV=1
          Length = 321

 Score =  153 bits (386), Expect = 7e-36
 Identities = 70/114 (61%), Positives = 82/114 (71%)
 Frame = -1

Query: 573 PLACSPLWSGQYLRDNWIDTDLPYTKFMSNLCFLANQPPADERCYFYRVENTCTPQASSA 394
           P   SPLWS  YL+DNWIDTDLP TKF  N+  L   PP D+R YFYRVENT TPQ +  
Sbjct: 196 PSPGSPLWSSAYLKDNWIDTDLPLTKFSVNITNLQKHPPNDQRSYFYRVENTATPQVTGP 255

Query: 393 VACVKPVTSRIQPYVRLFISQAYKRGLGDYLQILSSDFIEDDFIDACIGATLGR 232
           V CV PVTSRI+ Y RLF+++ +K GLGD LQI S DF+E DF+D CIG T+ R
Sbjct: 256 VLCVYPVTSRIRGYARLFLAEVFKEGLGDRLQIFSGDFVEPDFVDNCIGVTIAR 309


>tr|Q69JZ2|Q69JZ2_ORYSJ Os09g0535900 protein OS=Oryza sativa subsp.
           japonica GN=P0569E11.10 PE=2 SV=1
          Length = 337

 Score =  152 bits (385), Expect = 1e-35
 Identities = 70/116 (60%), Positives = 85/116 (73%)
 Frame = -1

Query: 573 PLACSPLWSGQYLRDNWIDTDLPYTKFMSNLCFLANQPPADERCYFYRVENTCTPQASSA 394
           P    PLWS  YLRDNWIDTDLP TKF SN+ FL  QPP  +R +FYRVENT TPQA + 
Sbjct: 219 PKPGEPLWSAGYLRDNWIDTDLPETKFESNVKFLGEQPPVADRRFFYRVENTVTPQADNP 278

Query: 393 VACVKPVTSRIQPYVRLFISQAYKRGLGDYLQILSSDFIEDDFIDACIGATLGRLE 226
           V CV+PVT RI  Y RLFI++ + +GLGD LQ+ S+DFI+ DF+DAC G T  R++
Sbjct: 279 VLCVRPVTRRIHGYARLFIAEVFAKGLGDKLQVFSTDFIDGDFVDACAGVTKARVD 334


>tr|A2Z3H3|A2Z3H3_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_32177 PE=4 SV=1
          Length = 337

 Score =  152 bits (385), Expect = 1e-35
 Identities = 70/116 (60%), Positives = 85/116 (73%)
 Frame = -1

Query: 573 PLACSPLWSGQYLRDNWIDTDLPYTKFMSNLCFLANQPPADERCYFYRVENTCTPQASSA 394
           P    PLWS  YLRDNWIDTDLP TKF SN+ FL  QPP  +R +FYRVENT TPQA + 
Sbjct: 219 PKPGEPLWSAGYLRDNWIDTDLPETKFESNVKFLGEQPPVADRRFFYRVENTVTPQADNP 278

Query: 393 VACVKPVTSRIQPYVRLFISQAYKRGLGDYLQILSSDFIEDDFIDACIGATLGRLE 226
           V CV+PVT RI  Y RLFI++ + +GLGD LQ+ S+DFI+ DF+DAC G T  R++
Sbjct: 279 VLCVRPVTRRIHGYARLFIAEVFAKGLGDKLQVFSTDFIDGDFVDACAGVTKARVD 334


>tr|A9T2K2|A9T2K2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_218300 PE=4 SV=1
          Length = 323

 Score =  152 bits (383), Expect = 2e-35
 Identities = 67/114 (58%), Positives = 85/114 (74%)
 Frame = -1

Query: 573 PLACSPLWSGQYLRDNWIDTDLPYTKFMSNLCFLANQPPADERCYFYRVENTCTPQASSA 394
           P   SPLWS  Y++DNWIDTDLP TKF  N+  L  QPP D+R YFYRVENT TPQ +  
Sbjct: 197 PSPGSPLWSSAYIKDNWIDTDLPLTKFHGNVTNLQKQPPNDQRTYFYRVENTATPQITGP 256

Query: 393 VACVKPVTSRIQPYVRLFISQAYKRGLGDYLQILSSDFIEDDFIDACIGATLGR 232
           + CV PVT+RI+ Y RLF+++ +K+GLGD LQI S DF++ +F+DACIG T+ R
Sbjct: 257 MLCVYPVTNRIRGYARLFLAEVFKQGLGDRLQIFSGDFVDQEFVDACIGVTIAR 310


>tr|B4G206|B4G206_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 318

 Score =  149 bits (377), Expect = 8e-35
 Identities = 70/116 (60%), Positives = 84/116 (72%)
 Frame = -1

Query: 573 PLACSPLWSGQYLRDNWIDTDLPYTKFMSNLCFLANQPPADERCYFYRVENTCTPQASSA 394
           P    PLWS  YL+DNWIDTDLP TKF SNL FL  QPP   R +FYRVENT TP+A + 
Sbjct: 200 PRPGDPLWSAGYLKDNWIDTDLPETKFESNLKFLGQQPPVAGRRFFYRVENTVTPKADNP 259

Query: 393 VACVKPVTSRIQPYVRLFISQAYKRGLGDYLQILSSDFIEDDFIDACIGATLGRLE 226
           V CV PVT RI  Y RLFI++A+ +GLGD LQ+ S+DFI+ DF+DAC G T  R++
Sbjct: 260 VLCVWPVTKRIHGYARLFIAEAFAKGLGDKLQVFSTDFIDGDFVDACAGVTKARVD 315


>tr|B4FUX3|B4FUX3_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 333

 Score =  149 bits (377), Expect = 8e-35
 Identities = 70/116 (60%), Positives = 84/116 (72%)
 Frame = -1

Query: 573 PLACSPLWSGQYLRDNWIDTDLPYTKFMSNLCFLANQPPADERCYFYRVENTCTPQASSA 394
           P    PLWS  YL+DNWIDTDLP TKF SNL FL  QPP   R +FYRVENT TP+A + 
Sbjct: 215 PRPGDPLWSAGYLKDNWIDTDLPETKFESNLKFLGQQPPVAGRRFFYRVENTVTPKADNP 274

Query: 393 VACVKPVTSRIQPYVRLFISQAYKRGLGDYLQILSSDFIEDDFIDACIGATLGRLE 226
           V CV PVT RI  Y RLFI++A+ +GLGD LQ+ S+DFI+ DF+DAC G T  R++
Sbjct: 275 VLCVWPVTKRIHGYARLFIAEAFAKGLGDKLQVFSTDFIDGDFVDACAGVTKARVD 330


>tr|Q9SW43|Q9SW43_ARATH Putative uncharacterized protein AT4g34920
           OS=Arabidopsis thaliana GN=T11I11.160 PE=2 SV=1
          Length = 318

 Score =  147 bits (371), Expect = 4e-34
 Identities = 69/110 (62%), Positives = 82/110 (74%)
 Frame = -1

Query: 555 LWSGQYLRDNWIDTDLPYTKFMSNLCFLANQPPADERCYFYRVENTCTPQASSAVACVKP 376
           LW+  YL+DNWIDTDLP+TKF SNL  L+ Q P   R +FYRVENT TPQA + V  VKP
Sbjct: 206 LWNSDYLKDNWIDTDLPWTKFQSNLKHLSEQQPTSSRKFFYRVENTVTPQADNPVVWVKP 265

Query: 375 VTSRIQPYVRLFISQAYKRGLGDYLQILSSDFIEDDFIDACIGATLGRLE 226
           VT RI+ + RLFISQ   +G GD LQILS+DFIE DF+DAC+G T  R+E
Sbjct: 266 VTDRIRKHARLFISQCVSKGCGDKLQILSTDFIEGDFVDACVGLTHARIE 315


>tr|Q8S9L7|Q8S9L7_ARATH AT4g34920/F11I11_160 OS=Arabidopsis thaliana
           PE=2 SV=1
          Length = 317

 Score =  147 bits (371), Expect = 4e-34
 Identities = 69/110 (62%), Positives = 82/110 (74%)
 Frame = -1

Query: 555 LWSGQYLRDNWIDTDLPYTKFMSNLCFLANQPPADERCYFYRVENTCTPQASSAVACVKP 376
           LW+  YL+DNWIDTDLP+TKF SNL  L+ Q P   R +FYRVENT TPQA + V  VKP
Sbjct: 206 LWNSDYLKDNWIDTDLPWTKFQSNLKHLSEQQPTSSRKFFYRVENTVTPQADNPVVWVKP 265

Query: 375 VTSRIQPYVRLFISQAYKRGLGDYLQILSSDFIEDDFIDACIGATLGRLE 226
           VT RI+ + RLFISQ   +G GD LQILS+DFIE DF+DAC+G T  R+E
Sbjct: 266 VTDRIRKHARLFISQCVSKGCGDKLQILSTDFIEGDFVDACVGLTHARIE 315


>tr|Q8L9W0|Q8L9W0_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 318

 Score =  147 bits (371), Expect = 4e-34
 Identities = 69/110 (62%), Positives = 82/110 (74%)
 Frame = -1

Query: 555 LWSGQYLRDNWIDTDLPYTKFMSNLCFLANQPPADERCYFYRVENTCTPQASSAVACVKP 376
           LW+  YL+DNWIDTDLP+TKF SNL  L+ Q P   R +FYRVENT TPQA + V  VKP
Sbjct: 206 LWNSDYLKDNWIDTDLPWTKFQSNLKHLSEQQPTSSRKFFYRVENTVTPQADNPVVWVKP 265

Query: 375 VTSRIQPYVRLFISQAYKRGLGDYLQILSSDFIEDDFIDACIGATLGRLE 226
           VT RI+ + RLFISQ   +G GD LQILS+DFIE DF+DAC+G T  R+E
Sbjct: 266 VTDRIRKHARLFISQCVSKGCGDKLQILSTDFIEGDFVDACVGLTHARIE 315