BP912968 [AcEST]

BP912968
Clone id	YMU001_000024_H06
Library	YMU01
Length	407
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000024_H06.
Accession	BP912968
Tissue type	prothallium
Developmental stage	-
Contig ID	CL3114Contig1
Sequence	AAGCAGCTTCCACTATTAGAGCAGATTACTTTTGTACAATCATAGAACCTGGCTTTTTTT CCATACCATAGTAACTCTTATCTAGCACTGCCCCCTCGGATAGCCCTATTACCAGTTCCT ATTTGCATCTATATAGAGCCCACCATTTACAGTCATCTCTTGTCTCCCTTTCGTAGACAT CGTAGGCATCGCCTCAGAATAGACCACAGATTCCCATGAGAAAAGCTAGTTATAGGTCAT CATTACTTGCCATCAGTGTTCACTAGATATAATTAGGCTTAGTATCATCTTGAAAAGCCA TCAGCTTCTTAGCGGTTTGTATGAAGCCTGTCGCGACACCTCCAGCACCATATCTAGGAT GGTCTGCTCTCTTGTCTGTTAGAAGCGAGAGGTACAAGGCACAAGGA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	P04371
Definition	sp\|P04371\|COX1_TRYBB Cytochrome c oxidase subunit 1 OS=Trypanosoma brucei brucei
Align length	42
Score (bit)	33.1
E-value	0.44
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP912968\|Adiantum capillus-veneris mRNA, clone: YMU001_000024_H06. (407 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|P04371\|COX1_TRYBB Cytochrome c oxidase subunit 1 OS=Trypanoso... 33 0.44 sp\|A6RSH5\|DBP7_BOTFB ATP-dependent RNA helicase dbp7 OS=Botryoti... 29 6.3 >sp\|P04371\|COX1_TRYBB Cytochrome c oxidase subunit 1 OS=Trypanosoma brucei brucei GN=COXI PE=3 SV=1 Length = 549 Score = 33.1 bits (74), Expect = 0.44 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = +1 Query: 46 NLAFFPYHSNSYLALPPRIALLPVPICIYIEPTIYSHLLSPF 171 N+ FFP HS A P RI+ P+ + T+Y LL F Sbjct: 424 NMVFFPLHSLGMFAFPRRISDYPISFLFWSAFTLYGMLLLTF 465 >sp\|A6RSH5\|DBP7_BOTFB ATP-dependent RNA helicase dbp7 OS=Botryotinia fuckeliana (strain B05.10) GN=dbp7 PE=3 SV=1 Length = 877 Score = 29.3 bits (64), Expect = 6.3 Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 1/30 (3%) Frame = -2 Query: 352 YGAGGVATGFIQT-AKKLMAFQDDTKPNYI 266 Y +G + G I + AKK ++FQD+T+P Y+ Sbjct: 155 YASGKLPPGSINSGAKKAISFQDETRPAYV 184
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP912968\|Adiantum capillus-veneris mRNA, clone: YMU001_000024_H06. (407 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****