BP912970
Clone id YMU001_000024_H08
Library
Length 455
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000024_H08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GATACACAATTGATTGAAGATCTACGACGAGAGCTGGCACTTGAAAAAAGACAAAGAGTG
ATGATATTTGAAGGCGCAATGAAAACGGAAGATGACCTTCGAAGAGAGATTGAGGTCCTA
AAAGGCGCAGGCTCCAGCGTAATTATGATACAAGAGGATCCGAAACTTAGAGAGAAGAAT
GAAGACTTAAAGAAACAAATAGAAGAACTGAAAGCACAGGCAGAGAAAGAGAAGAAGGAG
AAAAATGAATTTGCCAGATTAAATCAGGAAATGGTACAACAGCTTCTAAAGTATCAGAGA
AAGAAAGAAGATGATGATGATGAAGAAGGAGGGCAACAAGGCAGAGCACAACTCAGAACT
GAGAATATAGGAGACCTTGGTACCCTGGCAGACGTGTATGGAGGCGAGGAATCGGAGACC
AACCAACAAGGTGGCTCTGATCCTCCCCAAGATAA
■■Homology search results ■■ -
sp_hit_id Q8VDP3
Definition sp|Q8VDP3|MICA1_MOUSE NEDD9-interacting protein with calponin homology and LIM domains OS=Mus musculus
Align length 63
Score (bit) 30.0
E-value 4.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912970|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_H08.
(455 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8VDP3|MICA1_MOUSE NEDD9-interacting protein with calponin ho... 30 4.9
sp|Q9HBR0|S38AA_HUMAN Putative sodium-coupled neutral amino acid... 30 6.4
sp|Q5RC98|S38AA_PONAB Putative sodium-coupled neutral amino acid... 29 8.4
sp|Q21FL0|NHAA2_SACD2 Na(+)/H(+) antiporter nhaA 2 OS=Saccharoph... 29 8.4

>sp|Q8VDP3|MICA1_MOUSE NEDD9-interacting protein with calponin
homology and LIM domains OS=Mus musculus GN=Mical1 PE=1
SV=1
Length = 1048

Score = 30.0 bits (66), Expect = 4.9
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 14/63 (22%)
Frame = +1

Query: 28 RELALEKRQR--------VMIFEGAMKTEDDLRREIEVLK------GAGSSVIMIQEDPK 165
+EL LE++QR M E MKTE DL+ E +VL+ ++I QE+ +
Sbjct: 983 QELDLEEKQRQLDHELRGYMNREETMKTEADLQSENQVLRKLLEVVNQRDALIQFQEERR 1042

Query: 166 LRE 174
LRE
Sbjct: 1043 LRE 1045


>sp|Q9HBR0|S38AA_HUMAN Putative sodium-coupled neutral amino acid
transporter 10 OS=Homo sapiens GN=SLC38A10 PE=1 SV=2
Length = 1119

Score = 29.6 bits (65), Expect = 6.4
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +1

Query: 7 QLIEDLRRELALEKRQRVMIFEGAMKTEDDLRREIEVLKGAGSSVIMIQEDP--KLREKN 180
+L++ + LA+ + Q I + + E+D R++EV + G++V QE P K RE
Sbjct: 714 RLLDQQEKLLAVIEEQHKEIHQQRQEDEEDKPRQVEVHQEPGAAVPRGQEAPEGKARETV 773

Query: 181 EDL 189
E+L
Sbjct: 774 ENL 776


>sp|Q5RC98|S38AA_PONAB Putative sodium-coupled neutral amino acid
transporter 10 OS=Pongo abelii GN=SLC38A10 PE=2 SV=1
Length = 1121

Score = 29.3 bits (64), Expect = 8.4
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1

Query: 7 QLIEDLRRELALEKRQRVMIFEGAMKTEDDLRREIEVLKGAGSSVIMIQEDP--KLREKN 180
+L++ + LA+ + Q I + + E+D R++EV G++V QE P K RE
Sbjct: 714 RLLDQQEKLLAVIEEQHKEIHQQRQEDEEDKPRQVEVHPEPGAAVPRGQEAPEGKARETM 773

Query: 181 EDL 189
E+L
Sbjct: 774 ENL 776


>sp|Q21FL0|NHAA2_SACD2 Na(+)/H(+) antiporter nhaA 2
OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 /
DSM 17024) GN=nhaA2 PE=3 SV=1
Length = 382

Score = 29.3 bits (64), Expect = 8.4
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -2

Query: 118 GPQSLFEGHLPFSLRLQISSLFVFFQVPALVV 23
G SLF HLP SL+L + S+ +F + A+V+
Sbjct: 132 GVFSLFGRHLPVSLKLFLLSVAIFDDIAAIVI 163


tr_hit_id A4HQB1
Definition tr|A4HQB1|A4HQB1_LEIBR Putative uncharacterized protein OS=Leishmania braziliensis
Align length 61
Score (bit) 35.4
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912970|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_H08.
(455 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4HQB1|A4HQB1_LEIBR Putative uncharacterized protein OS=Leish... 35 1.4
tr|B3DGU2|B3DGU2_DANRE RAB11 family interacting protein 4 (Class... 34 4.2
tr|Q5JJA4|Q5JJA4_PYRKO Large helicase-related protein OS=Pyrococ... 33 5.4
tr|Q4Q0G7|Q4Q0G7_LEIMA Putative uncharacterized protein OS=Leish... 33 9.3
tr|B7R1P0|B7R1P0_9EURY DEAD/H associated family protein OS=Therm... 33 9.3

>tr|A4HQB1|A4HQB1_LEIBR Putative uncharacterized protein
OS=Leishmania braziliensis GN=LbrM35_V2.6230 PE=4 SV=1
Length = 292

Score = 35.4 bits (80), Expect = 1.4
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +1

Query: 4 TQLIEDLRRELALEKRQRVMIFEGAMKTEDDLRREIEVLKGAGSSVIMIQED-PKLREKN 180
TQL+ REL LE +Q+ + + +K E+DLRRE+EV + + + +QE KL + +
Sbjct: 10 TQLLRIRNRELELETKQQEL--DSKLKQEEDLRRELEVEQEKLAKLRSVQETLEKLNDGS 67

Query: 181 E 183
E
Sbjct: 68 E 68


>tr|B3DGU2|B3DGU2_DANRE RAB11 family interacting protein 4 (Class
II) b OS=Danio rerio GN=rab11fip4b PE=2 SV=1
Length = 502

Score = 33.9 bits (76), Expect = 4.2
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 14/75 (18%)
Frame = +1

Query: 7 QLIEDLRRELA------LE-------KRQRVMIFEGAMKT-EDDLRREIEVLKGAGSSVI 144
+LIEDLRREL LE +R + + E + +T E +L +E+ LK
Sbjct: 363 ELIEDLRRELEHLQLYKLEAERAGRGRRSSISLSEYSSRTRESELEQEVRRLK------- 415

Query: 145 MIQEDPKLREKNEDL 189
Q++ KLRE+NEDL
Sbjct: 416 --QDNQKLREQNEDL 428


>tr|Q5JJA4|Q5JJA4_PYRKO Large helicase-related protein OS=Pyrococcus
kodakaraensis GN=TK1015 PE=4 SV=1
Length = 925

Score = 33.5 bits (75), Expect = 5.4
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +1

Query: 22 LRRELALEKRQRVMIFEGAMKTEDDLRREIEVLKGAGSSV---IMIQEDPK 165
L+RELA + R + + EG E+DL+R E ++G S I ++ PK
Sbjct: 545 LKRELAFDFRNALSLIEGVEFREEDLKRAFEEIRGEPFSTDRDIFVESTPK 595


>tr|Q4Q0G7|Q4Q0G7_LEIMA Putative uncharacterized protein
OS=Leishmania major GN=LmjF36.5930 PE=4 SV=1
Length = 292

Score = 32.7 bits (73), Expect = 9.3
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +1

Query: 7 QLIEDLRRELALEKRQRVMIFEGAMKTEDDLRREIEVLKGAGSSVIMIQEDPKLREKNED 186
QL+ REL LE +Q+ + + +K E+DLR+E+EV + + +QE L + NE
Sbjct: 11 QLLRIRNRELELETKQQEL--DSKLKQEEDLRKELEVEHEKLAKLRSVQE--TLEKMNEG 66

Query: 187 L 189
L
Sbjct: 67 L 67


>tr|B7R1P0|B7R1P0_9EURY DEAD/H associated family protein
OS=Thermococcus sp. AM4 GN=TAM4_1813 PE=4 SV=1
Length = 926

Score = 32.7 bits (73), Expect = 9.3
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +1

Query: 22 LRRELALEKRQRVMIFEGAMKTEDDLRREIEVLK 123
LRRELA + R+ + + EG +ED+LRR +E ++
Sbjct: 545 LRRELAFDFRKALGLLEGVEFSEDELRRALEEIR 578