BP912972 |
Clone id |
YMU001_000024_H10 |
Library |
YMU01 |
Length |
359 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000024_H10. |
Accession |
BP912972 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2398Contig1 |
Sequence |
CAAGGCATAGGCCTTGGAGAGAGAGATGGCGAGAATCAGCGAGGAGTGGAGCGATTTTCG CAAAGAGATAAAGATTGATCATCTTCCCTCTGAAAGCGATGACTATGAGAAGGCCAGAGA AAAAATGCTGAGTTACAATGAACGAATGATCAATAAAATGCAAAGGAACCCTTTTATCTT TCCAGGAACAGTCTGTGAGGATAGGACGAAGGGGATGGGAATCGGTATAGGCTTTACAAG CCAACGCTAAAGGAGCTCCCTCGCAGGCCACCATTGGTGTGGCAAGTGCTTCCTGAGCAT CAAGAAGAATACGAAAAAATGTATAAGAAGATAACGCACAAGTGGTGGAAATCTGGGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q0SM34 |
Definition |
sp|Q0SM34|MURC_BORAP UDP-N-acetylmuramate--L-alanine ligase OS=Borrelia afzelii (strain PKo) |
Align length |
42 |
Score (bit) |
30.4 |
E-value |
2.9 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A0DL71 |
Definition |
tr|A0DL71|A0DL71_PARTE Chromosome undetermined scaffold_55, whole genome shotgun sequence OS=Paramecium tetraurelia |
Align length |
55 |
Score (bit) |
34.7 |
E-value |
2.5 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912972|Adiantum capillus-veneris mRNA, clone: YMU001_000024_H10. (359 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A0DL71|A0DL71_PARTE Chromosome undetermined scaffold_55, whol... 35 2.5 tr|Q02GP6|Q02GP6_PSEAB Putative uncharacterized protein OS=Pseud... 34 4.2 tr|Q7WXU7|Q7WXU7_PSEAE Putative uncharacterized protein OS=Pseud... 34 4.2 tr|B7GRH8|B7GRH8_BIFLO Putative uncharacterized protein OS=Bifid... 33 5.5 tr|A7NHT4|A7NHT4_ROSCS Amidohydrolase OS=Roseiflexus castenholzi... 33 7.2 tr|Q8IC05|Q8IC05_PLAF7 Heat shock protein 86 OS=Plasmodium falci... 33 7.2 tr|Q25882|Q25882_PLAFA Heat shock protein 86 OS=Plasmodium falci... 33 7.2 tr|Q25869|Q25869_PLAFA Heat-shock protein OS=Plasmodium falcipar... 33 7.2 tr|A5DZF6|A5DZF6_LODEL Putative uncharacterized protein OS=Lodde... 33 7.2 tr|A1B287|A1B287_PARDP Putative uncharacterized protein OS=Parac... 33 9.4 tr|Q1K066|Q1K066_DESAC Putative uncharacterized protein OS=Desul... 33 9.4 tr|B4XWC5|B4XWC5_9BRAN C-type lectin (Fragment) OS=Branchiostoma... 33 9.4
>tr|A0DL71|A0DL71_PARTE Chromosome undetermined scaffold_55, whole genome shotgun sequence OS=Paramecium tetraurelia GN=GSPATT00018105001 PE=4 SV=1 Length = 493
Score = 34.7 bits (78), Expect = 2.5 Identities = 19/55 (34%), Positives = 25/55 (45%) Frame = +2
Query: 47 WSDFRKEIKIDHLPSESDDYEKAREKMLSYNERMINKMQRNPFIFPGTVCEDRTK 211 W +F+ EI ESD Y+ LSY ERM + Q N + E+R K Sbjct: 113 WEEFQPEIVQTQQEPESDLYDDHLRSQLSYRERMRKEFQENQTLIEKEKQEERRK 167
>tr|Q02GP6|Q02GP6_PSEAB Putative uncharacterized protein OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=PA14_58920 PE=4 SV=1 Length = 226
Score = 33.9 bits (76), Expect = 4.2 Identities = 16/59 (27%), Positives = 29/59 (49%) Frame = +2
Query: 71 KIDHLPSESDDYEKAREKMLSYNERMINKMQRNPFIFPGTVCEDRTKGMGIGIGFTSQR 247 +I+H + D YEK +K ER+ ++ + + PG EDR + + I + + R Sbjct: 63 QIEHAKEKRDRYEKKAKKRRELRERLAKQLVASNYPLPGNTLEDRLEILQIALIYNRAR 121
>tr|Q7WXU7|Q7WXU7_PSEAE Putative uncharacterized protein OS=Pseudomonas aeruginosa GN=RL114 PE=4 SV=1 Length = 226
Score = 33.9 bits (76), Expect = 4.2 Identities = 16/59 (27%), Positives = 29/59 (49%) Frame = +2
Query: 71 KIDHLPSESDDYEKAREKMLSYNERMINKMQRNPFIFPGTVCEDRTKGMGIGIGFTSQR 247 +I+H + D YEK +K ER+ ++ + + PG EDR + + I + + R Sbjct: 63 QIEHAKEKRDRYEKKAKKRRELRERLAKQLVASNYPLPGNTLEDRLEILQIALIYNRAR 121
>tr|B7GRH8|B7GRH8_BIFLO Putative uncharacterized protein OS=Bifidobacterium longum subsp. infantis ATCC 15697 GN=Blon_1320 PE=4 SV=1 Length = 349
Score = 33.5 bits (75), Expect = 5.5 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = -2
Query: 271 VACEGAPLALACKAYTDSHPLRPILTDCSWKDKRVPLHFID 149 VAC+G + A D HP ++ +DKR+PL FID Sbjct: 121 VACDGDMIDTAVHGMLDRHPGSGVVVKFMLRDKRLPLAFID 161
>tr|A7NHT4|A7NHT4_ROSCS Amidohydrolase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=Rcas_0916 PE=4 SV=1 Length = 395
Score = 33.1 bits (74), Expect = 7.2 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = +1
Query: 247 LKELPRRPPLVWQVLPEHQ 303 L LP RPP +W +LP+HQ Sbjct: 370 LPRLPERPPAIWAILPDHQ 388
>tr|Q8IC05|Q8IC05_PLAF7 Heat shock protein 86 OS=Plasmodium falciparum (isolate 3D7) GN=PF07_0029 PE=4 SV=1 Length = 745
Score = 33.1 bits (74), Expect = 7.2 Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 2/117 (1%) Frame = +1
Query: 1 QGIGLGERDGENQRGVERFSQRDKD*SSSL*KR*L*EGQRKNAELQ*TNDQ*NAKEPFYL 180 +G G GER+GE + ++ + DK+ S + E + N E D ++ Sbjct: 224 EGEGEGEREGEEEEEKKKKTGEDKNADESKEENEDEEKKEDNEEDDNKTDHPKVEDVTEE 283
Query: 181 SRNSL*G*DEGDGNRYRLYKPTLKELPRRPPLVWQVLPEH--QEEYEKMYKKITHKW 345 N+ E + + +EL ++ PL W PE EEY YK +T+ W Sbjct: 284 LENAEKKKKEKRKKKIHTVEHEWEELNKQKPL-WMRKPEEVTNEEYASFYKSLTNDW 339
>tr|Q25882|Q25882_PLAFA Heat shock protein 86 OS=Plasmodium falciparum GN=HSP86 PE=4 SV=1 Length = 745
Score = 33.1 bits (74), Expect = 7.2 Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 2/117 (1%) Frame = +1
Query: 1 QGIGLGERDGENQRGVERFSQRDKD*SSSL*KR*L*EGQRKNAELQ*TNDQ*NAKEPFYL 180 +G G GER+GE + ++ + DK+ S + E + N E D ++ Sbjct: 224 EGEGEGEREGEEEEEKKKKTGEDKNADESKEENEDEEKKEDNEEDDNKTDHPKVEDVTEE 283
Query: 181 SRNSL*G*DEGDGNRYRLYKPTLKELPRRPPLVWQVLPEH--QEEYEKMYKKITHKW 345 N+ E + + +EL ++ PL W PE EEY YK +T+ W Sbjct: 284 LENAEKKKKEKRKKKIHTVEHEWEELNKQKPL-WMRKPEEVTNEEYASFYKSLTNDW 339
>tr|Q25869|Q25869_PLAFA Heat-shock protein OS=Plasmodium falciparum PE=2 SV=1 Length = 745
Score = 33.1 bits (74), Expect = 7.2 Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 2/117 (1%) Frame = +1
Query: 1 QGIGLGERDGENQRGVERFSQRDKD*SSSL*KR*L*EGQRKNAELQ*TNDQ*NAKEPFYL 180 +G G GER+GE + ++ + DK+ S + E + N E D ++ Sbjct: 224 EGEGEGEREGEEEEEKKKKTGEDKNADESKEENEDEEKKEDNEEDDNKTDHPKVEDVTEE 283
Query: 181 SRNSL*G*DEGDGNRYRLYKPTLKELPRRPPLVWQVLPEH--QEEYEKMYKKITHKW 345 N+ E + + +EL ++ PL W PE EEY YK +T+ W Sbjct: 284 LENAEKKKKEKRKKKIHTVEHEWEELNKQKPL-WMRKPEEVTNEEYASFYKSLTNDW 339
>tr|A5DZF6|A5DZF6_LODEL Putative uncharacterized protein OS=Lodderomyces elongisporus GN=LELG_02743 PE=4 SV=1 Length = 1439
Score = 33.1 bits (74), Expect = 7.2 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = +2
Query: 14 LEREMARISEEWSDFRKEIKIDHLPSESDDYEKAREKMLSYNERMINK 157 +ERE+ R + EW + + IKI S ++A E+ML E + K Sbjct: 467 IERELIRTNREWENLSRHIKIAEESRRSRSEDRAYEEMLKSRESLEEK 514
>tr|A1B287|A1B287_PARDP Putative uncharacterized protein OS=Paracoccus denitrificans (strain Pd 1222) GN=Pden_1531 PE=4 SV=1 Length = 308
Score = 32.7 bits (73), Expect = 9.4 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%) Frame = +2
Query: 32 RISEEWSDFRKEIKIDHLPSESDDYEKAREKMLSYNERMINKMQRNPFIFPGTVCE---- 199 RI+ W+D RK ++ P D + A+ N+RM++ M +FPGT + Sbjct: 234 RIAATWADNRKVPQVAFKP---DWAKHAKAAPFKRNDRMLDTMPIGVIVFPGTGIQENLA 290
Query: 200 DRTKGMGIGI 229 D+ + MGI + Sbjct: 291 DKARKMGIPV 300
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