BP912973
Clone id YMU001_000024_H11
Library
Length 536
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000024_H11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GGTGGTGGTAGTGCCTTGTTAAGTTTTGTAAATTCTCTGCCTAGAATCATTGATGCTCAT
TATCAATTGTTAGGAGACTTTTTATCCCTACATGTATCCATTGGTATATGTGGAATTGGA
CTCTTGGATGTAAAACTTTCCCCTTCTCAAAGGAGAGTATGTAAAATATGAGGCATTACG
AAAATAAATTTATGCAGGTTAGAGTCCAAGGATGTTCTGGGTGCTTCTGCTTTTAATTGC
TGGGGTGGTCAAGGATGCCCTTTTGCTGTCGTGCGATTGTATGTAGCTTTCTGTACTGTG
TCATGGTAATGAGCGATCTTCTTAATGATAGCAATTGGGTTACAATTGTGGTCTTGCTGC
CCTTTTCAGATTTTGCATGTATGTATTGAATGGCTTGTTCTCCACTAAGAGGGTTGTAGT
AATGTTACCTGTTATGTGCATGCTAGCTGCATGAGCCGACGGACTGAAGCAAAATCAAAG
TATATAGCTTATTTGTACTCTTTGGTTCCATTTGTACATAGATGTGCTTACTCATG
■■Homology search results ■■ -
sp_hit_id Q8FT42
Definition sp|Q8FT42|CARB_COREF Carbamoyl-phosphate synthase large chain OS=Corynebacterium efficiens
Align length 30
Score (bit) 29.6
E-value 9.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912973|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_H11.
(536 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8FT42|CARB_COREF Carbamoyl-phosphate synthase large chain OS... 30 9.7

>sp|Q8FT42|CARB_COREF Carbamoyl-phosphate synthase large chain
OS=Corynebacterium efficiens GN=carB PE=3 SV=1
Length = 1113

Score = 29.6 bits (65), Expect = 9.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -2

Query: 421 YYNPLSGEQAIQYIHAKSEKGSKTTIVTQL 332
Y+ PL+ E ++ HA+SE G+ ++ QL
Sbjct: 629 YFEPLTFEDVMEVYHAESESGTVAGVIVQL 658


tr_hit_id A6L8S2
Definition tr|A6L8S2|A6L8S2_PARD8 Glycosyltransferase family 2 OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152)
Align length 42
Score (bit) 34.3
E-value 4.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912973|Adiantum capillus-veneris mRNA, clone:
YMU001_000024_H11.
(536 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A6L8S2|A6L8S2_PARD8 Glycosyltransferase family 2 OS=Parabacte... 34 4.2

>tr|A6L8S2|A6L8S2_PARD8 Glycosyltransferase family 2
OS=Parabacteroides distasonis (strain ATCC 8503 / DSM
20701 / NCTC 11152) GN=BDI_0301 PE=4 SV=1
Length = 301

Score = 34.3 bits (77), Expect = 4.2
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +1

Query: 25 FVNSLPRIIDAHYQLLGDFLSLHVSIGICGIGLLDVKLSPSQ 150
F+NS +++ ++L DFL L++++G CG L D ++P+Q
Sbjct: 84 FLNSDTVLLNNAVKILSDFLDLNLNVGACGGNLYDGCMNPAQ 125