BP912975
Clone id YMU001_000025_A02
Library
Length 304
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000025_A02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TGAAGTGGAGCATATCGTTTGCACCATGCTTCAAGAAGTCTGTTTCCTTTTGAATCTAAA
TGAGTGGCATTTTGTGTAGCCTCTTTGCATTTTCCTTCTTGCCATTCTTACCCCCACTTT
GCATTTCCGACAGAATTCTCAAAACAAGTAGGTTCTACATCCTGCACAATCTTCGCCATC
TACACAACAGCCCTTTCTTGCTGCCTCTTTGTGGAGCATGAGCAATTTAGCAACGTAGCA
TCTAAGACAAACTCACATTCCTACCAGATGGCAGCAGGTAGCCGACTAGTTCAACTAGAC
ACAC
■■Homology search results ■■ -
sp_hit_id Q51649
Definition sp|Q51649|T408_BURM1 Putative transposase for insertion sequence IS408 OS=Burkholderia multivorans (strain ATCC 17616 / 249)
Align length 51
Score (bit) 30.0
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912975|Adiantum capillus-veneris mRNA, clone:
YMU001_000025_A02.
(304 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q51649|T408_BURM1 Putative transposase for insertion sequence... 30 3.8
sp|Q4VX76|SYTL3_HUMAN Synaptotagmin-like protein 3 OS=Homo sapie... 30 4.9
sp|Q3B725|ZBT24_RAT Zinc finger and BTB domain-containing protei... 29 8.4

>sp|Q51649|T408_BURM1 Putative transposase for insertion sequence
IS408 OS=Burkholderia multivorans (strain ATCC 17616 /
249) GN=Bmul_4730 PE=3 SV=1
Length = 518

Score = 30.0 bits (66), Expect = 3.8
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Frame = -2

Query: 216 LHKEAARKGCCVD------GEDCAGCRTYLF*EFCRKCKVGVRMARRKMQR 82
LH+E RKG + E G RTY + +FC+K K + +R M++
Sbjct: 90 LHRELRRKGVTLQLLWEEYAEANPGQRTYRYTQFCQKYKDWAKSIKRSMRQ 140


>sp|Q4VX76|SYTL3_HUMAN Synaptotagmin-like protein 3 OS=Homo sapiens
GN=SYTL3 PE=2 SV=2
Length = 610

Score = 29.6 bits (65), Expect = 4.9
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = -2

Query: 249 CLRCYVAKLLMLHKEAARKGCCVDGEDCAGCRTYLF*EFCRKCKVGVRMARRKMQRG 79
C RC +LH+ A +GC CA CR +L KC V K++ G
Sbjct: 63 CARCQQVLGFLLHRGAVCRGC--SHRVCAQCRVFLRGTHAWKCTVCFEDRNVKIKTG 117


>sp|Q3B725|ZBT24_RAT Zinc finger and BTB domain-containing protein
24 OS=Rattus norvegicus GN=Zbtb24 PE=2 SV=1
Length = 705

Score = 28.9 bits (63), Expect = 8.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3

Query: 129 DRILKTSRFYILHNLRHLHNSPFLLPLCG 215
DR+ K S F +H RH PF CG
Sbjct: 299 DRVFKYSHFLAIHQRRHTGERPFKCSECG 327


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912975|Adiantum capillus-veneris mRNA, clone:
YMU001_000025_A02.
(304 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******