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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912980
Clone id YMU001_000025_A07
Library
Length 532
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000025_A07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ATGCATTCTTGAGGCTGCATTACATCTGGGAGACAAAATACTCTAGACTTGATAACAGTT
TGCCTCACTGTAAAACCAGGCACACACATAAACCTCACCTCCTTCTGAGGTTTCACACGG
ACCGTGCTGTCATCTTCTTCATATTAATCACGTGCGATGTCTGCCATAAACTTATCATCA
AAGGATGAGCCGCTACCCACATGGAAAATCTCTGCACTTGGCTCAAATGCCAAGGCAAGC
TTGTGAAGCACCCATACAGCCTTGGCAAATCGCAAAAACTTGCGGTGGAGACCTTGGTCA
TTCCTGTTGAGCAGATCCAAGTTAGTGTCCTCACCTGATGCTGACAAGAGCCGCAACTTG
ATTTCTTCACATACAGCATATGCTTTGGCATGGACCAAAACCTCAAAATCTTTGTCCTCA
TCCAATAACTGTGCAACCTCTCTATCACGACACCTTCTAAAAGAGTGAAATAGCTGAGAT
TTGCGCTTTGATGGTATCTCAAAGGGTGAATTACCGCTGTCTAGAGTACCTG
■■Homology search results ■■ -
sp_hit_id Q39442
Definition sp|Q39442|VATA_BETVU V-type proton ATPase catalytic subunit A OS=Beta vulgaris
Align length 90
Score (bit) 31.2
E-value 3.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912980|Adiantum capillus-veneris mRNA, clone:
YMU001_000025_A07.
         (532 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q39442|VATA_BETVU V-type proton ATPase catalytic subunit A OS...    31   3.2  
sp|Q5F480|ITPK1_CHICK Inositol-tetrakisphosphate 1-kinase OS=Gal...    31   4.2  
sp|P13548|VATA_PHAAU V-type proton ATPase catalytic subunit A OS...    30   5.5  
sp|P09469|VATA_DAUCA V-type proton ATPase catalytic subunit A OS...    30   9.4  
sp|Q8S8Y9|WNK2_ARATH Serine/threonine-protein kinase WNK2 OS=Ara...    30   9.5  

>sp|Q39442|VATA_BETVU V-type proton ATPase catalytic subunit A
           OS=Beta vulgaris PE=2 SV=1
          Length = 623

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 25/90 (27%), Positives = 40/90 (44%)
 Frame = -3

Query: 455 RCRDREVAQLLDEDKDFEVLVHAKAYAVCEEIKLRLLSASGEDTNLDLLNRNDQGLHRKF 276
           R + REV Q  D+  +   LV   A A  ++I L       ED     L +N    + KF
Sbjct: 479 RTKAREVLQREDDLNEIVQLVGKDALAETDKITLDTAKLLRED----YLAQNAFTAYDKF 534

Query: 275 LRFAKAVWVLHKLALAFEPSAEIFHVGSGS 186
             F K+VW++  +   +  + +    G+GS
Sbjct: 535 CPFYKSVWMMRNIIHFYNLANQAVERGAGS 564


>sp|Q5F480|ITPK1_CHICK Inositol-tetrakisphosphate 1-kinase OS=Gallus
           gallus GN=ITPK1 PE=2 SV=1
          Length = 407

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
 Frame = -3

Query: 437 VAQLLDEDKDFEVLVHAKAY----AVCEEIKLRLLSASGEDTNLDLLNRN 300
           +  LLD  K +E++   +AY     +C    + L SA GEDT L L+ +N
Sbjct: 100 IRTLLDRSKSYELIRQIEAYMQDERICSPPFMELTSACGEDT-LQLIEKN 148


>sp|P13548|VATA_PHAAU V-type proton ATPase catalytic subunit A
           OS=Phaseolus aureus PE=1 SV=3
          Length = 623

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 25/90 (27%), Positives = 40/90 (44%)
 Frame = -3

Query: 455 RCRDREVAQLLDEDKDFEVLVHAKAYAVCEEIKLRLLSASGEDTNLDLLNRNDQGLHRKF 276
           R + REV Q  D+  +   LV   A A  ++I L       ED     L +N    + KF
Sbjct: 479 RTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLRED----YLAQNAFTPYDKF 534

Query: 275 LRFAKAVWVLHKLALAFEPSAEIFHVGSGS 186
             F K+VW++  +   +  + +    G+GS
Sbjct: 535 CPFYKSVWMMRNIIHFYNLANQAVERGAGS 564


>sp|P09469|VATA_DAUCA V-type proton ATPase catalytic subunit A
           OS=Daucus carota PE=2 SV=1
          Length = 623

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 24/89 (26%), Positives = 39/89 (43%)
 Frame = -3

Query: 455 RCRDREVAQLLDEDKDFEVLVHAKAYAVCEEIKLRLLSASGEDTNLDLLNRNDQGLHRKF 276
           R + REV Q  D+  +   LV   A A  ++I L       ED     L +N    + KF
Sbjct: 479 RTKAREVLQREDDLNEIVQLVGKDALAETDKITLETAKLLRED----YLAQNAFTPYDKF 534

Query: 275 LRFAKAVWVLHKLALAFEPSAEIFHVGSG 189
             F K+VW++  +   +  + +    G+G
Sbjct: 535 CPFYKSVWMMRNIIHFYNLANQAVERGAG 563


>sp|Q8S8Y9|WNK2_ARATH Serine/threonine-protein kinase WNK2
           OS=Arabidopsis thaliana GN=WNK2 PE=1 SV=1
          Length = 568

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +2

Query: 419 HPITVQPLYHDTF*KSEIAEI 481
           HP+   PLYHD F  S+I EI
Sbjct: 309 HPLIDDPLYHDQFESSQICEI 329
tr_hit_id O22146
Definition tr|O22146|O22146_ARATH Putative uncharacterized protein At2g45260 OS=Arabidopsis thaliana
Align length 84
Score (bit) 65.9
E-value 1.0e-09
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912980|Adiantum capillus-veneris mRNA, clone:
YMU001_000025_A07.
         (532 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|O22146|O22146_ARATH Putative uncharacterized protein At2g4526...    66   1e-09
tr|B6TSF7|B6TSF7_MAIZE Putative uncharacterized protein OS=Zea m...    65   2e-09
tr|Q9LZZ5|Q9LZZ5_ARATH Putative uncharacterized protein T4C21_90...    65   3e-09
tr|A7PYC1|A7PYC1_VITVI Chromosome chr15 scaffold_37, whole genom...    64   6e-09
tr|A7PYD3|A7PYD3_VITVI Chromosome chr15 scaffold_37, whole genom...    62   2e-08
tr|Q9LKB7|Q9LKB7_ARATH Gb|AAB82637.1 OS=Arabidopsis thaliana PE=...    61   4e-08
tr|Q84JK4|Q84JK4_ARATH Putative uncharacterized protein At3g1487...    61   4e-08
tr|Q338Y6|Q338Y6_ORYSJ Expressed protein OS=Oryza sativa subsp. ...    61   4e-08
tr|Q2V3V8|Q2V3V8_ARATH Uncharacterized protein At3g14870.3 OS=Ar...    61   4e-08
tr|Q0IY20|Q0IY20_ORYSJ Os10g0378400 protein OS=Oryza sativa subs...    61   4e-08
tr|A9RFE1|A9RFE1_PHYPA Predicted protein OS=Physcomitrella paten...    61   4e-08
tr|A3C482|A3C482_ORYSJ Putative uncharacterized protein OS=Oryza...    61   4e-08
tr|A7QDG4|A7QDG4_VITVI Chromosome chr10 scaffold_81, whole genom...    60   5e-08
tr|A9STS4|A9STS4_PHYPA Predicted protein OS=Physcomitrella paten...    60   7e-08
tr|A7NY22|A7NY22_VITVI Chromosome chr6 scaffold_3, whole genome ...    60   9e-08
tr|A2Z6P2|A2Z6P2_ORYSI Putative uncharacterized protein OS=Oryza...    60   9e-08
tr|B6SPS0|B6SPS0_MAIZE Putative uncharacterized protein OS=Zea m...    59   2e-07
tr|A9SHS4|A9SHS4_PHYPA Predicted protein OS=Physcomitrella paten...    59   2e-07
tr|A2Z972|A2Z972_ORYSI Putative uncharacterized protein OS=Oryza...    59   2e-07
tr|Q9MAG4|Q9MAG4_ARATH F12M16.27 (At1g53380) OS=Arabidopsis thal...    58   3e-07
tr|Q0WSC7|Q0WSC7_ARATH Putative uncharacterized protein At1g5338...    58   3e-07
tr|B6SWW4|B6SWW4_MAIZE Putative uncharacterized protein OS=Zea m...    58   3e-07
tr|B4FCZ5|B4FCZ5_MAIZE Putative uncharacterized protein OS=Zea m...    58   3e-07
tr|A9RG36|A9RG36_PHYPA Predicted protein (Fragment) OS=Physcomit...    58   3e-07
tr|Q8L4S9|Q8L4S9_ORYSJ Os10g0508100 protein OS=Oryza sativa subs...    58   3e-07
tr|A3C6C2|A3C6C2_ORYSJ Putative uncharacterized protein OS=Oryza...    58   3e-07
tr|B6SPT9|B6SPT9_MAIZE Putative uncharacterized protein OS=Zea m...    57   8e-07
tr|O49496|O49496_ARATH Putative uncharacterized protein AT4g3408...    56   1e-06
tr|A9RU45|A9RU45_PHYPA Predicted protein OS=Physcomitrella paten...    56   1e-06
tr|A9TZ66|A9TZ66_PHYPA Predicted protein (Fragment) OS=Physcomit...    56   1e-06

>tr|O22146|O22146_ARATH Putative uncharacterized protein At2g45260
           OS=Arabidopsis thaliana GN=At2g45260 PE=2 SV=1
          Length = 425

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 30/84 (35%), Positives = 53/84 (63%)
 Frame = -3

Query: 287 HRKFLRFAKAVWVLHKLALAFEPSAEIFHVGSGSSFDDKFMADIARD*YEEDDSTVRVKP 108
           ++ FL+ AK++W+LH+LA +F+P+A+IF V  GS F D +M  + ++   ++      + 
Sbjct: 339 YQAFLKLAKSIWILHRLAYSFDPAAKIFQVKKGSEFSDSYMESVVKNIVVDEK-----EE 393

Query: 107 QKEVRFMCVPGFTVRQTVIKSRVF 36
              V  M +PGF +  +VI+SRV+
Sbjct: 394 NPRVGLMVMPGFWIGGSVIQSRVY 417


>tr|B6TSF7|B6TSF7_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 422

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 9/154 (5%)
 Frame = -3

Query: 470 FHSFRRCRDREVAQLLDEDKDFEVLVHAKAYAVCEEIKLRLLSASGEDT---NLDLLNRN 300
           FH F   R  +   +L ++ D    V  K    C    L L+    E +   N+D  N  
Sbjct: 272 FHQFLAVRAMDPLDVLSQNPDS---VFGK---FCRSKYLLLVHQKMEGSFFGNMDQRNYV 325

Query: 299 DQGLHRK------FLRFAKAVWVLHKLALAFEPSAEIFHVGSGSSFDDKFMADIARD*YE 138
             G H +      FL+ AK++W+LH+LA +F+P A++F V  GS F D  M  + ++   
Sbjct: 326 MSGGHPRTPFYQAFLKLAKSIWLLHRLAYSFDPKAKVFQVKKGSEFSDIHMESVVKNIIL 385

Query: 137 EDDSTVRVKPQKEVRFMCVPGFTVRQTVIKSRVF 36
           E+ +      + +V  M +PGF +  +VI+SRV+
Sbjct: 386 EEGA-----ERPKVGLMVMPGFLIGTSVIQSRVY 414


>tr|Q9LZZ5|Q9LZZ5_ARATH Putative uncharacterized protein T4C21_90
           (At3g60680) (Putative uncharacterized protein
           At3g60680/T4C21_90) OS=Arabidopsis thaliana GN=T4C21_90
           PE=2 SV=1
          Length = 499

 Score = 64.7 bits (156), Expect = 3e-09
 Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 7/139 (5%)
 Frame = -3

Query: 431 QLLDEDKD--FEVLVHAKAYAVCEEIKLRLLSA--SGEDTNLDLLN--RNDQGLHRKFLR 270
           +LLD DKD  F      K +   E I   + S+  S  D N  +L+  R+    +  F+ 
Sbjct: 360 ELLDRDKDCAFSRFCDKKYH---ELIHPNMASSIFSNMDENEAVLSSWRSLSTFYESFVT 416

Query: 269 FAKAVWVLHKLALAFEPSAEIFHVGSGSSFDDKFMADIARD*YEEDDSTVRVKPQK-EVR 93
            A ++W LHKLAL+F+P+ EIF V SG  F   FM ++ +    + D    + P + +V 
Sbjct: 417 MASSIWTLHKLALSFDPAVEIFQVESGVEFSIVFMENVLK---RKQDKKFSMSPTRAKVG 473

Query: 92  FMCVPGFTVRQTVIKSRVF 36
           F  VPGF +  TVI+ +V+
Sbjct: 474 FTVVPGFKIGCTVIQCQVY 492


>tr|A7PYC1|A7PYC1_VITVI Chromosome chr15 scaffold_37, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00026382001
           PE=4 SV=1
          Length = 459

 Score = 63.5 bits (153), Expect = 6e-09
 Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
 Frame = -3

Query: 449 RDREVAQLLDEDKD--FEVLVHAKAY--AVCEEIKLRLLSASGEDTNLDLLNRNDQGL-- 288
           ++R + QL++   D   E+L +  +     CE     L+  + E +    L++N+  L  
Sbjct: 307 KNRSLKQLIEHVSDGPLEILKNPNSQFSKFCETKYQELIHPTMESSIFSNLDKNEVVLNS 366

Query: 287 -------HRKFLRFAKAVWVLHKLALAFEPSAEIFHVGSGSSFDDKFMADIARD*YEEDD 129
                  +  F+  A ++W+LHKLA +F P  EIF V  G  F   +M D+ R       
Sbjct: 367 WRSLSVFYESFVNMASSIWMLHKLAFSFNPVVEIFQVERGVEFSMVYMEDVTR------K 420

Query: 128 STVRVKPQKEVRFMCVPGFTVRQTVIKSRVF 36
           S +  K + +V F  VPGF + +TV++++V+
Sbjct: 421 SMLPGKARGKVGFTVVPGFKIGRTVVQAQVY 451


>tr|A7PYD3|A7PYD3_VITVI Chromosome chr15 scaffold_37, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00026395001
           PE=4 SV=1
          Length = 422

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 16/165 (9%)
 Frame = -3

Query: 482 KSQLFHSFRRCRDREVAQLLDEDKD----------FEVLVHAKAYAVCEEIKLRLLSASG 333
           K   FH F   R+ +    L ++ D          + V+VH K  A          S  G
Sbjct: 268 KESFFHQFLALREMDPLDTLGQNPDSIFGKFCRSKYLVVVHPKMDA----------SFFG 317

Query: 332 EDTNLDLLNRNDQGLHRK------FLRFAKAVWVLHKLALAFEPSAEIFHVGSGSSFDDK 171
              NLD  N    G H +      FL+ AK++W+LH+LA +F+P+ ++F V  GS F + 
Sbjct: 318 ---NLDQRNYVMGGGHPRTPFYQAFLKLAKSIWLLHRLAYSFDPNVKVFQVKRGSEFSEV 374

Query: 170 FMADIARD*YEEDDSTVRVKPQKEVRFMCVPGFTVRQTVIKSRVF 36
           +M  + ++   ++      KP  +V  M +PGF +  +VI+ RV+
Sbjct: 375 YMESVVKNLVMDESDE---KP--KVGLMVMPGFWIGGSVIQCRVY 414


>tr|Q9LKB7|Q9LKB7_ARATH Gb|AAB82637.1 OS=Arabidopsis thaliana PE=4
           SV=1
          Length = 475

 Score = 60.8 bits (146), Expect = 4e-08
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
 Frame = -3

Query: 278 FLRFAKAVWVLHKLALAFEPSAEIFHVGSGSSFDDKFMADIARD*Y---EEDDSTVRVKP 108
           FL  AK VW+LH LA +F+P A IF V  G  F + +M  ++ + +   E+++S+   +P
Sbjct: 383 FLEMAKRVWLLHCLAFSFDPEASIFQVSRGCRFSEVYMKSVSEEAFFSPEQEESSSETEP 442

Query: 107 QKEVRFMCVPGFTVRQTVIKSRVF 36
              V F  VPGF + +T I+  V+
Sbjct: 443 --GVAFTVVPGFRIGKTTIQCEVY 464


>tr|Q84JK4|Q84JK4_ARATH Putative uncharacterized protein At3g14870
           OS=Arabidopsis thaliana GN=At3g14870 PE=2 SV=1
          Length = 471

 Score = 60.8 bits (146), Expect = 4e-08
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
 Frame = -3

Query: 278 FLRFAKAVWVLHKLALAFEPSAEIFHVGSGSSFDDKFMADIARD*Y---EEDDSTVRVKP 108
           FL  AK VW+LH LA +F+P A IF V  G  F + +M  ++ + +   E+++S+   +P
Sbjct: 379 FLEMAKRVWLLHCLAFSFDPEASIFQVSRGCRFSEVYMKSVSEEAFFSPEQEESSSETEP 438

Query: 107 QKEVRFMCVPGFTVRQTVIKSRVF 36
              V F  VPGF + +T I+  V+
Sbjct: 439 --GVAFTVVPGFRIGKTTIQCEVY 460


>tr|Q338Y6|Q338Y6_ORYSJ Expressed protein OS=Oryza sativa subsp.
           japonica GN=LOC_Os10g23220 PE=4 SV=1
          Length = 422

 Score = 60.8 bits (146), Expect = 4e-08
 Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 9/154 (5%)
 Frame = -3

Query: 470 FHSFRRCRDREVAQLLDEDKDFEVLVHAKAYAVCEEIKLRLLSASGEDT---NLDLLNRN 300
           FH F   R  +   +L ++ D    V  K    C    L L+    E +   N+D  N  
Sbjct: 272 FHQFLAVRAMDPLDVLSQNPDS---VFGK---FCRSKYLLLVHPKMEGSFFGNMDQRNYV 325

Query: 299 DQGLHRK------FLRFAKAVWVLHKLALAFEPSAEIFHVGSGSSFDDKFMADIARD*YE 138
             G H +      FL+ AK++W+LH+LA +F+P  ++F V  GS F +  M  + ++   
Sbjct: 326 MSGGHPRTPFYQAFLKLAKSIWLLHRLAYSFDPKVKVFQVKKGSDFSEIHMESVVKNIIL 385

Query: 137 EDDSTVRVKPQKEVRFMCVPGFTVRQTVIKSRVF 36
           ++ +      + +V  M +PGF +  +VI+SRV+
Sbjct: 386 DEGA-----ERPKVGLMVMPGFLIGTSVIQSRVY 414


>tr|Q2V3V8|Q2V3V8_ARATH Uncharacterized protein At3g14870.3
           OS=Arabidopsis thaliana GN=At3g14870 PE=4 SV=1
          Length = 472

 Score = 60.8 bits (146), Expect = 4e-08
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
 Frame = -3

Query: 278 FLRFAKAVWVLHKLALAFEPSAEIFHVGSGSSFDDKFMADIARD*Y---EEDDSTVRVKP 108
           FL  AK VW+LH LA +F+P A IF V  G  F + +M  ++ + +   E+++S+   +P
Sbjct: 380 FLEMAKRVWLLHCLAFSFDPEASIFQVSRGCRFSEVYMKSVSEEAFFSPEQEESSSETEP 439

Query: 107 QKEVRFMCVPGFTVRQTVIKSRVF 36
              V F  VPGF + +T I+  V+
Sbjct: 440 --GVAFTVVPGFRIGKTTIQCEVY 461


>tr|Q0IY20|Q0IY20_ORYSJ Os10g0378400 protein OS=Oryza sativa subsp.
           japonica GN=Os10g0378400 PE=4 SV=1
          Length = 338

 Score = 60.8 bits (146), Expect = 4e-08
 Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 9/154 (5%)
 Frame = -3

Query: 470 FHSFRRCRDREVAQLLDEDKDFEVLVHAKAYAVCEEIKLRLLSASGEDT---NLDLLNRN 300
           FH F   R  +   +L ++ D    V  K    C    L L+    E +   N+D  N  
Sbjct: 188 FHQFLAVRAMDPLDVLSQNPDS---VFGK---FCRSKYLLLVHPKMEGSFFGNMDQRNYV 241

Query: 299 DQGLHRK------FLRFAKAVWVLHKLALAFEPSAEIFHVGSGSSFDDKFMADIARD*YE 138
             G H +      FL+ AK++W+LH+LA +F+P  ++F V  GS F +  M  + ++   
Sbjct: 242 MSGGHPRTPFYQAFLKLAKSIWLLHRLAYSFDPKVKVFQVKKGSDFSEIHMESVVKNIIL 301

Query: 137 EDDSTVRVKPQKEVRFMCVPGFTVRQTVIKSRVF 36
           ++ +      + +V  M +PGF +  +VI+SRV+
Sbjct: 302 DEGA-----ERPKVGLMVMPGFLIGTSVIQSRVY 330