BP912985
Clone id YMU001_000025_A12
Library
Length 585
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000025_A12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CTACAAAGACAGAGAGCTCTACTTACCCAATTTCGCCACAGACTTGAGCAAATTTTGCTC
CATTTTAGCACACTTCCAAGTCACCCCAATTTTTGCACACAGAAAGAGAAATTTCCTCTG
TTTAAAGGGGGGCATCCTTTCCCTTTGTTTCCAATCACTTTTTTCTTTTTTTGTATGTGC
TTTTCTGCCCCCAAAGCTGACTTTGATTTGCAATTTACTACTACTACAACTCTCTGGGCC
ATCAAATCCGCTCACATGAGCATATCACTCCCTTTGTTTGAAGTTCTCTTCTTTGAGTTT
GATTCTAGCTGATCATGGGTGGTCCTGGTTGGTTCCTGTCTGTGTGTGCGTTCAAAAGTG
TTAAAAGGGTTTATTGAAAGCAATCCCTTCATTTATGTGTGAGCTTCTCTTAATCACAGT
ACCATACCTGCCTTAATTTTTCCATATTTGTGTTTGATCCAAATACACAACATACAATTT
AAGGTGGGCTGTGGAGGATTTTTGCATACACAACACCCTAACTCTTTGCAGAATGTGCTT
CATTCATACTTGCCCTCATGTTTTGAGTTCAATTTATCTCTTCAT
■■Homology search results ■■ -
sp_hit_id Q9HFF2
Definition sp|Q9HFF2|YL92_SCHPO Uncharacterized protein C683.02c OS=Schizosaccharomyces pombe
Align length 62
Score (bit) 32.3
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912985|Adiantum capillus-veneris mRNA, clone:
YMU001_000025_A12.
(569 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9HFF2|YL92_SCHPO Uncharacterized protein C683.02c OS=Schizos... 32 1.7
sp|O80739|POT12_ARATH Putative potassium transporter 12 OS=Arabi... 31 3.8
sp|Q9YDX4|AOX4_AERPE Heme-copper oxidase subunit 4 OS=Aeropyrum ... 31 3.8
sp|Q7XPL3|HAK15_ORYSJ Probable potassium transporter 15 OS=Oryza... 30 8.4

>sp|Q9HFF2|YL92_SCHPO Uncharacterized protein C683.02c
OS=Schizosaccharomyces pombe GN=SPAC683.02c PE=2 SV=1
Length = 218

Score = 32.3 bits (72), Expect = 1.7
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = -3

Query: 225 SSSKLQIKVSFGGRKAH---TKKEKSDWKQRERMPPFKQRKFLFLCAKIG-VTWKCAKME 58
SSS+ +K SFG K + KK++S++++ R+ + KF F C + G + C + +
Sbjct: 37 SSSQDNMKASFGSSKRYDERQKKKRSEYRRLRRINQRNRDKFCFACRQQGHIVQDCPEAK 96

Query: 57 QN 52
N
Sbjct: 97 DN 98


>sp|O80739|POT12_ARATH Putative potassium transporter 12
OS=Arabidopsis thaliana GN=POT12 PE=2 SV=2
Length = 827

Score = 31.2 bits (69), Expect = 3.8
Identities = 21/95 (22%), Positives = 41/95 (43%)
Frame = +1

Query: 271 PLFEVLFFEFDSS*SWVVLVGSCLCVRSKVLKGFIESNPFIYV*ASLNHSTIPALIFPYL 450
P + VLFF +S +W L G LC+ + A L H ++ ++ +
Sbjct: 318 PFYIVLFFNKNSKQAWSALGGCVLCITGAEA-----------MFADLGHFSVRSIQMAFT 366

Query: 451 CLIQIHNIQFKVGCGGFLHTQHPNSLQNVLHSYLP 555
C++ + +G +L T+HP + + + +P
Sbjct: 367 CVVFPCLLLAYMGQAAYL-TKHPEASARIFYDSVP 400


>sp|Q9YDX4|AOX4_AERPE Heme-copper oxidase subunit 4 OS=Aeropyrum
pernix GN=aoxC PE=4 SV=2
Length = 103

Score = 31.2 bits (69), Expect = 3.8
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1

Query: 316 WVVLVGSCLCVRSKVLKGFIESNPFIYV*A-SLNHSTIPALIFPYL 450
W+VLV S + VL+G I NPF++V A +L S++ AL F +L
Sbjct: 21 WIVLVASAVAEVYLVLEG-IARNPFVFVLAVALFQSSLIALFFQHL 65


>sp|Q7XPL3|HAK15_ORYSJ Probable potassium transporter 15 OS=Oryza
sativa subsp. japonica GN=HAK15 PE=2 SV=2
Length = 867

Score = 30.0 bits (66), Expect = 8.4
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = +1

Query: 271 PLFEVLFFEFDSS*SWVVLVGSCLCVR-SKVLKGFIESNPFIYV*ASLNHSTIPALIFPY 447
PL+ + +F + +W+ L G LC S+ + + P YV + +P L+ Y
Sbjct: 354 PLYIIYYFGRNPFQAWLSLAGCLLCATGSEAIFANLSYFPVRYVQSMFALLVLPCLVLAY 413

Query: 448 LCLIQIHNIQFKVGCGGFLHTQHPNSLQNVLHSYLPS 558
L G G FL + NS + + S +PS
Sbjct: 414 L------------GQGAFL-IANQNSSEQIFFSSIPS 437


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912985|Adiantum capillus-veneris mRNA, clone:
YMU001_000025_A12.
(569 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******