BP912986 [AcEST]

BP912986
Clone id	YMU001_000025_B01
Library	YMU01
Length	207
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000025_B01.
Accession	BP912986
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	GTTACAAAATATGCCTGAAGGCAAAGTATAATGATAAACCATAGATGGAAAAAACCCCTG AAGATTGTCAAGCATTACAAAGCTGAGGGGAAAAATCTAGGGCTCAATACAGGATAAATG ATACATGTAAATGTGATGGAGGAAAAAACCAAGAGACGAATGCTTGCAGAGAAGAAAGAT CTGAAGAATCACAACCTGTGAATTCCC
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	P31332
Definition	sp\|P31332\|L_SYNV Large structural protein OS=Sonchus yellow net virus
Align length	32
Score (bit)	29.3
E-value	6.4
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP912986\|Adiantum capillus-veneris mRNA, clone: YMU001_000025_B01. (207 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|P31332\|L_SYNV Large structural protein OS=Sonchus yellow net ... 29 6.4 sp\|Q9AUE0\|CALS1_ARATH Callose synthase 1 OS=Arabidopsis thaliana... 29 8.4 >sp\|P31332\|L_SYNV Large structural protein OS=Sonchus yellow net virus GN=L PE=2 SV=1 Length = 2116 Score = 29.3 bits (64), Expect = 6.4 Identities = 12/32 (37%), Positives = 21/32 (65%) Frame = +1 Query: 100 GLNTG*MIHVNVMEEKTKRRMLAEKKDLKNHN 195 GL ++ NV+ E+TKR++++ K +KN N Sbjct: 974 GLTFNYLVITNVLNERTKRKIISVTKVMKNRN 1005 >sp\|Q9AUE0\|CALS1_ARATH Callose synthase 1 OS=Arabidopsis thaliana GN=CALS1 PE=1 SV=2 Length = 1950 Score = 28.9 bits (63), Expect = 8.4 Identities = 13/21 (61%), Positives = 13/21 (61%) Frame = -2 Query: 65 IFRGFFHLWFIIILCLQAYFV 3 IFR F LW ILCLQA V Sbjct: 475 IFRSFDRLWSFYILCLQAMIV 495
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	B7GEL4
Definition	tr\|B7GEL4\|B7GEL4_PHATR Predicted protein OS=Phaeodactylum tricornutum CCAP 1055/1
Align length	53
Score (bit)	33.1
E-value	7.0
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP912986\|Adiantum capillus-veneris mRNA, clone: YMU001_000025_B01. (207 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|B7GEL4\|B7GEL4_PHATR Predicted protein OS=Phaeodactylum tricor... 33 7.0 tr\|B7GE35\|B7GE35_PHATR Predicted protein OS=Phaeodactylum tricor... 33 7.0 >tr\|B7GEL4\|B7GEL4_PHATR Predicted protein OS=Phaeodactylum tricornutum CCAP 1055/1 GN=PHATRDRAFT_41582 PE=4 SV=1 Length = 874 Score = 33.1 bits (74), Expect = 7.0 Identities = 18/53 (33%), Positives = 30/53 (56%) Frame = +1 Query: 28 IMINHRWKKPLKIVKHYKAEGKNLGLNTGMIHVNVMEEKTKRRMLAEKKDLK 186 I I H+ K LK++ H+ K+LGL+ + NV+ + + RM E+K L+ Sbjct: 157 IDIGHKTKTTLKVILHWADLQKSLGLDVNAEDYTNVVGQLARERMDEEEKILE 209 >tr\|B7GE35\|B7GE35_PHATR Predicted protein OS=Phaeodactylum tricornutum CCAP 1055/1 GN=PHATRDRAFT_41388 PE=4 SV=1 Length = 1032 Score = 33.1 bits (74), Expect = 7.0 Identities = 18/53 (33%), Positives = 30/53 (56%) Frame = +1 Query: 28 IMINHRWKKPLKIVKHYKAEGKNLGLNTGMIHVNVMEEKTKRRMLAEKKDLK 186 I I H+ K LK++ H+ K+LGL+ + NV+ + + RM E+K L+ Sbjct: 157 IDIGHKTKTTLKVILHWADLQKSLGLDVNAEDYTNVVGQLARERMDEEEKILE 209