BP912987
Clone id YMU001_000025_B02
Library
Length 564
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000025_B02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GTGAAATTAGCAAGGGGTTAGGGTGAAATTAGAGTGTAGGCACACAATTAGCAAGATATG
GTGAAAAACTAGGGAAAAACGAGCACATTGCTTCATGCACACACATTCAAAATCCACAAA
ACCATAAACACACAAGTGAAATTAGTGAGAAAACACATCCGATTATGCCATAACTACAGT
AACGTTGGCCATCGTCCTTGACAATGGTGCCAAATGTTGAGGTTACCATTGTAGCATAGC
TCTAATGACCAACAAAATTATCAATCCGGAGAGTGACCTGGCAGGCTAGGGCATGGAAAC
ACTCACACGATTAGTAAGCTAGTCATGGCAACATGAATGGCGACTCTATGAGGTGAGCTT
CTCGGTCTATGGAGGAGCTAAGCCACAATGATTGGCAATCTCCACATCCACTTTTCTTCA
TCTCCAATCAACCCAATCACACACACTAACGATTGTAGGACACACACAACACTAATCCTA
TCATGCAACACACTAATCATAAGCACACACACATAGATCTATTAAGCACCACACTCCAGT
TGAGTACCTGCAGGTAATATCTCA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912987|Adiantum capillus-veneris mRNA, clone:
YMU001_000025_B02.
(564 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q8EFD6
Definition tr|Q8EFD6|Q8EFD6_SHEON Cation efflux family protein OS=Shewanella oneidensis
Align length 71
Score (bit) 35.4
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912987|Adiantum capillus-veneris mRNA, clone:
YMU001_000025_B02.
(564 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q8EFD6|Q8EFD6_SHEON Cation efflux family protein OS=Shewanell... 35 2.2
tr|A5C571|A5C571_VITVI Putative uncharacterized protein OS=Vitis... 33 8.2
tr|A5BSV2|A5BSV2_VITVI Putative uncharacterized protein OS=Vitis... 33 8.2

>tr|Q8EFD6|Q8EFD6_SHEON Cation efflux family protein OS=Shewanella
oneidensis GN=SO_2045 PE=4 SV=1
Length = 394

Score = 35.4 bits (80), Expect = 2.2
Identities = 23/71 (32%), Positives = 30/71 (42%)
Frame = +3

Query: 300 HSHD**ASHGNMNGDSMR*ASRSMEELSHNDWQSPHPLFFISNQPNHTH*RL*DTHNTNP 479
HSHD SHGN +G S+ E +H D L + +H H D H+ +
Sbjct: 166 HSHDHGHSHGNSHGHSLHQVHDKHEHTAHKDNHCCDGLEHHAADHDHDHDHDHD-HDHDH 224

Query: 480 IMQHTNHKHTH 512
H NH H H
Sbjct: 225 DHDHDNHSHNH 235


>tr|A5C571|A5C571_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_003258 PE=4 SV=1
Length = 1567

Score = 33.5 bits (75), Expect = 8.2
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2

Query: 332 HEWRLYEVSFSVYGGAKPQ*LAISTSTFLHLQSTQSHTLTIV 457
+EWR SF+VY G KP +A FL+ + + LTIV
Sbjct: 1449 NEWRTLNASFNVYFGVKPVKVARCGFHFLYAHDYEQNNLTIV 1490


>tr|A5BSV2|A5BSV2_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_024109 PE=4 SV=1
Length = 1350

Score = 33.5 bits (75), Expect = 8.2
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2

Query: 332 HEWRLYEVSFSVYGGAKPQ*LAISTSTFLHLQSTQSHTLTIV 457
+EWR SF+VY G KP +A FL+ + + LTIV
Sbjct: 1299 NEWRTLNASFNVYFGVKPVKVARCGFHFLYAHDYEQNNLTIV 1340