BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912989|Adiantum capillus-veneris mRNA, clone:
YMU001_000025_B04.
         (323 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q08534|R1AB_BYVU Replicase polyprotein 1ab OS=Beet yellows vi...    32   1.3  
sp|Q59N20|MSS11_CANAL Transcription activator MSS11 OS=Candida a...    30   2.8  
sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protei...    29   6.3  
sp|Q6UUW5|CRLB_DICDI Cyclic AMP receptor-like protein B OS=Dicty...    29   6.3  

>sp|Q08534|R1AB_BYVU Replicase polyprotein 1ab OS=Beet yellows virus
            (isolate Ukraine) GN=1a-1b PE=1 SV=2
          Length = 3094

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +2

Query: 167  SKFLVLC*FVWVCECVHDIFCSIILWRSCWGAEICRL 277
            +KF   C  +  CECV  I C + L R CWG   C L
Sbjct: 1661 AKFFKTC-VITACECVSQI-CCLRLIRLCWGTPACGL 1695


>sp|Q59N20|MSS11_CANAL Transcription activator MSS11 OS=Candida
           albicans GN=MSS11 PE=3 SV=1
          Length = 640

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 20/82 (24%), Positives = 36/82 (43%)
 Frame = -3

Query: 306 SQQNRSTWVHNRQISAPQQDRQRMMEQKMSCXXXXXXXXXXXTRNLLEFLTSLTTTQKLP 127
           +   R  +++N+Q    QQ +Q+   Q  S             +N     T+ TTT +  
Sbjct: 355 NNSQRQKYLNNQQTRNSQQQQQQQQSQSQSQQSSPFQPPAQQPKNSTTTSTN-TTTSRAQ 413

Query: 126 KNSTHKLNSNSKRLDLQTLQRE 61
           K+S  +   NS+R  +Q  Q++
Sbjct: 414 KSSRKQQPKNSRRQSVQQQQQQ 435


>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein
           At3g09060 OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
          Length = 687

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 68  CSVCRSRRLEFELSLWVEFLGS 133
           C +CR R+++  L LW +FL S
Sbjct: 542 CGLCRDRKIDLALELWHQFLQS 563


>sp|Q6UUW5|CRLB_DICDI Cyclic AMP receptor-like protein B
           OS=Dictyostelium discoideum GN=crlB PE=2 SV=1
          Length = 442

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +2

Query: 2   GFSCIFFSPSSVISNVDHLDSRCSVCRSRRLEF-ELSLWVEF 124
           G + +FFS    +SN+D   S CSV  S +L F  + L+V F
Sbjct: 304 GVASLFFSKIITVSNIDQGGSWCSVSSSYQLYFWVIPLFVSF 345

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912989|Adiantum capillus-veneris mRNA, clone:
YMU001_000025_B04.
         (323 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9Q703|Q9Q703_9CLOS P348 OS=Beet yellows virus PE=4 SV=1            33   7.0  
tr|O89906|O89906_9CLOS Fusion protein OS=Beet yellows virus GN=O...    33   7.0  
tr|Q5D995|Q5D995_SCHJA SJCHGC02050 protein OS=Schistosoma japoni...    33   7.0  

>tr|Q9Q703|Q9Q703_9CLOS P348 OS=Beet yellows virus PE=4 SV=1
          Length = 3090

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +2

Query: 167  SKFLVLC*FVWVCECVHDIFCSIILWRSCWGAEICRL 277
            +KFL  C  +  CECV  I C + L R CWG   C L
Sbjct: 1661 AKFLKTC-VITACECVSQI-CCLRLIRLCWGTPACGL 1695


>tr|O89906|O89906_9CLOS Fusion protein OS=Beet yellows virus
            GN=ORF1a/b PE=4 SV=1
          Length = 3070

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +2

Query: 167  SKFLVLC*FVWVCECVHDIFCSIILWRSCWGAEICRL 277
            +KFL  C  +  CECV  I C + L R CWG   C L
Sbjct: 1661 AKFLKTC-VITACECVSQI-CCLRLIRLCWGTPACGL 1695


>tr|Q5D995|Q5D995_SCHJA SJCHGC02050 protein OS=Schistosoma japonicum
           PE=2 SV=1
          Length = 132

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +2

Query: 200 VCECVHDIFCSIILWRSCWGA--EICRLCTQVERF 298
           +C   H +F SIIL+R CWG   E  R C     F
Sbjct: 60  ICFNKHTVFISIILFRGCWGTNIECLRKCASANSF 94