BP913016 |
Clone id |
YMU001_000025_E02 |
Library |
YMU01 |
Length |
488 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000025_E02. |
Accession |
BP913016 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL4280Contig1 |
Sequence |
GCTTCAGCTGTCCCATCAACACCTATCCTCTTCATTACCTCGCCAAACTTGACAAGTATC ACCTTTCCCCCATACATTCGATCTCCACCATTTGTCATTGCTTCTCTCCAACTCCAGCTT TGCAGCCCATTTTCGACAATTGTAGCATTTGATGGCAAAGCAAGTGAAATTTGCCCATCT GTATCCAGCCTGCGCACAATATTCACAGCAGAGGCCCTGGGTCCTTTGAGAGAGTACTGA ATATAAGACTCAGAGTTCCCCTGCAATTTGTATGCGCTTGCCTTCGGTCTTTGTTGAAGG AGCTCCTCAAGTTCCTTGTAGCAGGAAAGCTTAACTGACCCTGCCCTATCGAATGGCTTG GCTTTCCTATACTCCTTAAGTAGGTTCCTCCATTTGTCAGTACACATTGTAGCTGACCTG TCATACCCTCTTTTTCTCATCTTGAATGATATTTGTTCCCATAGATGCTTGTTAGATTTT GATGTGTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P17040 |
Definition |
sp|P17040|ZSC20_HUMAN Zinc finger and SCAN domain-containing protein 20 OS=Homo sapiens |
Align length |
66 |
Score (bit) |
43.1 |
E-value |
0.0007 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NQR4 |
Definition |
tr|A9NQR4|A9NQR4_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
169 |
Score (bit) |
184.0 |
E-value |
1.0e-45 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913016|Adiantum capillus-veneris mRNA, clone: YMU001_000025_E02. (488 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NQR4|A9NQR4_PICSI Putative uncharacterized protein OS=Picea... 184 1e-45 tr|A7QBT5|A7QBT5_VITVI Chromosome chr1 scaffold_75, whole genome... 167 2e-40 tr|A5CAT3|A5CAT3_VITVI Putative uncharacterized protein OS=Vitis... 167 2e-40 tr|A7PLU6|A7PLU6_VITVI Chromosome chr14 scaffold_21, whole genom... 166 5e-40 tr|A8IXS2|A8IXS2_BRACM DNA binding protein GT-1 OS=Brassica camp... 161 2e-38 tr|Q9FX53|Q9FX53_ARATH DNA binding protein GT-1 (Putative unchar... 158 1e-37 tr|Q39116|Q39116_ARATH GT-1 protein OS=Arabidopsis thaliana GN=G... 158 1e-37 tr|A9UHK7|A9UHK7_SOYBN GT-1 OS=Glycine max PE=2 SV=1 153 4e-36 tr|Q8GT42|Q8GT42_ORYSI Putative uncharacterized protein OS=Oryza... 145 1e-33 tr|Q7XUC2|Q7XUC2_ORYSJ Os04g0486400 protein OS=Oryza sativa subs... 145 1e-33 tr|Q9LU92|Q9LU92_ARATH DNA-binding protein GT-1 (Transcription f... 142 8e-33 tr|B4Y5K2|B4Y5K2_MAIZE GT-like protein OS=Zea mays PE=2 SV=1 140 3e-32 tr|B8A1T0|B8A1T0_MAIZE Putative uncharacterized protein OS=Zea m... 140 4e-32 tr|Q7DMS9|Q7DMS9_TOBAC DNA-binding protein OS=Nicotiana tabacum ... 137 3e-31 tr|Q43326|Q43326_TOBAC Box II Factor (DNA-binding protein) (Frag... 137 3e-31 tr|B6T9V6|B6T9V6_MAIZE DNA-binding protein OS=Zea mays PE=2 SV=1 132 9e-30 tr|B3H720|B3H720_ARATH Uncharacterized protein At1g13450.3 OS=Ar... 128 2e-28 tr|Q2L6T7|Q2L6T7_ARATH Uncharacterized protein At1g13450.2 OS=Ar... 126 6e-28 tr|A7QYG0|A7QYG0_VITVI Chromosome chr17 scaffold_246, whole geno... 115 1e-24 tr|A9SP59|A9SP59_PHYPA Predicted protein OS=Physcomitrella paten... 59 1e-07 tr|A6YSM7|A6YSM7_GOSHI Transcription factor TF2 OS=Gossypium hir... 56 8e-07 tr|A7QW00|A7QW00_VITVI Chromosome chr2 scaffold_196, whole genom... 55 1e-06 tr|B0EW03|B0EW03_SOYBN Trihelix transcription factor OS=Glycine ... 54 5e-06 tr|Q7XTQ6|Q7XTQ6_ORYSJ OSJNBa0041A02.12 protein OS=Oryza sativa ... 53 7e-06 tr|Q01HT1|Q01HT1_ORYSA B0403H10-OSIGBa0105A11.17 protein OS=Oryz... 53 7e-06 tr|A3AX41|A3AX41_ORYSJ Putative uncharacterized protein OS=Oryza... 53 7e-06 tr|A2XX67|A2XX67_ORYSI Putative uncharacterized protein OS=Oryza... 53 7e-06 tr|A9P2A3|A9P2A3_PICSI Putative uncharacterized protein OS=Picea... 53 9e-06 tr|Q8LBM5|Q8LBM5_ARATH Trihelix DNA-binding protein (GT2) OS=Ara... 52 1e-05 tr|Q39117|Q39117_ARATH GT-2 factor (At1g76890) (Trihelix DNA-bin... 52 1e-05
>tr|A9NQR4|A9NQR4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 348
Score = 184 bits (468), Expect = 1e-45 Identities = 96/169 (56%), Positives = 119/169 (70%), Gaps = 7/169 (4%) Frame = -1
Query: 488 NTSKSNKHLWEQISFKMRKRGYDRSATMCTDKWRNLLKEYRKAKPF--DRAGSVKLSCYK 315 NTSKSNKHLWE+IS KMR+RG+DRS TMCTDKWRNLLKEY+KAK GS K+SCYK Sbjct: 66 NTSKSNKHLWEKISLKMRERGFDRSPTMCTDKWRNLLKEYKKAKHHHDSHDGSAKMSCYK 125
Query: 314 ELEELLQQRPKASAYKLQGN---SESYIQYSLKGPRASAVNIVRRLDTDGQISLALPSNA 144 +LEELL++R K + Y+ +SY +S KG S N+ RRLD DG + LALP + Sbjct: 126 DLEELLRERAKVAPYRSPNKVAALDSYPHFSPKGTGRSPFNLERRLDHDG-LPLALPLSD 184
Query: 143 TIVENGLQSWSWREAMTNGGDR--MYGGKVILVKFGEVMKRIGVDGTAE 3 NG W+WR+A NGG+ Y GKVILVK+G++ +RIG+DGTAE Sbjct: 185 ATAANGTPPWNWRDATGNGGENHTSYNGKVILVKWGDITRRIGIDGTAE 233
>tr|A7QBT5|A7QBT5_VITVI Chromosome chr1 scaffold_75, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035101001 PE=4 SV=1 Length = 370
Score = 167 bits (423), Expect = 2e-40 Identities = 90/179 (50%), Positives = 123/179 (68%), Gaps = 17/179 (9%) Frame = -1
Query: 488 NTSKSNKHLWEQISFKMRKRGYDRSATMCTDKWRNLLKEYRKAKPFDR-AGSVKLSCYKE 312 NTSKSNKHLWEQIS KMR++G+DRS TMCTDKWRNLLKE++KAK DR +GS K+S YKE Sbjct: 81 NTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGSGSAKMSYYKE 140
Query: 311 LEELLQQRPKASAYK--LQGNSESYIQYSLKGPRASAV-------------NIVRRLDTD 177 +EE+L++R K + YK + +IQ+S KG +++ N+ R+LD D Sbjct: 141 IEEILKERSKNAHYKSPTMSKVDPFIQFSDKGIDDTSIPFGPVEASGRPTLNLERQLDHD 200
Query: 176 GQISLALPSNATIVENGLQSWSWREAMTNGGD-RMYGGKVILVKFGEVMKRIGVDGTAE 3 G LA+ S + NG+ W+WRE +GG+ + YGG+VI VK+G+ +RIG+DGTA+ Sbjct: 201 GH-PLAITSADAVTANGVPPWNWRETPGSGGESQSYGGRVISVKWGDYTRRIGIDGTAD 258
>tr|A5CAT3|A5CAT3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030092 PE=4 SV=1 Length = 384
Score = 167 bits (423), Expect = 2e-40 Identities = 90/179 (50%), Positives = 123/179 (68%), Gaps = 17/179 (9%) Frame = -1
Query: 488 NTSKSNKHLWEQISFKMRKRGYDRSATMCTDKWRNLLKEYRKAKPFDR-AGSVKLSCYKE 312 NTSKSNKHLWEQIS KMR++G+DRS TMCTDKWRNLLKE++KAK DR +GS K+S YKE Sbjct: 81 NTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGSGSAKMSYYKE 140
Query: 311 LEELLQQRPKASAYK--LQGNSESYIQYSLKGPRASAV-------------NIVRRLDTD 177 +EE+L++R K + YK + +IQ+S KG +++ N+ R+LD D Sbjct: 141 IEEILKERSKNAHYKSPTMSKVDPFIQFSDKGIDDTSIPFGPVEASGRPTLNLERQLDHD 200
Query: 176 GQISLALPSNATIVENGLQSWSWREAMTNGGD-RMYGGKVILVKFGEVMKRIGVDGTAE 3 G LA+ S + NG+ W+WRE +GG+ + YGG+VI VK+G+ +RIG+DGTA+ Sbjct: 201 GH-PLAITSADAVTANGVPPWNWRETPGSGGESQSYGGRVISVKWGDYTRRIGIDGTAD 258
>tr|A7PLU6|A7PLU6_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00020571001 PE=4 SV=1 Length = 378
Score = 166 bits (420), Expect = 5e-40 Identities = 94/179 (52%), Positives = 118/179 (65%), Gaps = 20/179 (11%) Frame = -1
Query: 488 NTSKSNKHLWEQISFKMRKRGYDRSATMCTDKWRNLLKEYRKAKPFDR---AGSVKLSCY 318 NTSKSNKHLWEQIS KMR++G+DRS TMCTDKWRNLLKE++KAK DR +GS K++ Y Sbjct: 82 NTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRSSSSGSAKMAYY 141
Query: 317 KELEELLQQRPKASAYKLQGNS--ESYIQYSLKG-------------PRASAVNIVRRLD 183 KELEELL+ R K +YK S +SYIQ+S KG S VN+ R LD Sbjct: 142 KELEELLRDRSKNGSYKSPTPSKVDSYIQFSDKGLEDAGIPFGSVEASGRSTVNLERPLD 201
Query: 182 TDGQISLALPSNATIVENGLQSWSWREAMTNGGD--RMYGGKVILVKFGEVMKRIGVDG 12 DG LA+ + + +G+ W+WRE NGG+ YGG+VI VK+GE +RIG+DG Sbjct: 202 HDGD-PLAITAADAVAASGVPPWNWRETPGNGGEGHSSYGGRVISVKWGEYTRRIGIDG 259
>tr|A8IXS2|A8IXS2_BRACM DNA binding protein GT-1 OS=Brassica campestris PE=2 SV=1 Length = 399
Score = 161 bits (407), Expect = 2e-38 Identities = 92/187 (49%), Positives = 122/187 (65%), Gaps = 25/187 (13%) Frame = -1
Query: 488 NTSKSNKHLWEQISFKMRKRGYDRSATMCTDKWRNLLKEYRKAKPFDRAG-SVKLSCYKE 312 NTSKSNKHLWE+IS KMR++G+DRS TMCTDKWRNLLKEY+KAK DR S K+S YKE Sbjct: 100 NTSKSNKHLWEEISAKMREKGFDRSPTMCTDKWRNLLKEYKKAKHHDRGNVSAKMSYYKE 159
Query: 311 LEELLQQRPK--ASAYKLQGNS------ESYIQYSLKG---PRAS----------AVNIV 195 +E++L++R K + Y N+ +S++Q++ KG P S +N+ Sbjct: 160 IEDILRERSKKVTTQYSKSPNTPPIAKVDSFMQFTDKGFDDPSISFGSVEANGRPGLNLE 219
Query: 194 RRLDTDGQISLALPSNATIVENGLQSWSWREAMTNGGD---RMYGGKVILVKFGEVMKRI 24 R LD DG LA+ + + NG+ W+WRE NGGD + +GG+VI VKFG+ +RI Sbjct: 220 RSLDHDGH-PLAITTVDAVPANGVPPWNWRETPGNGGDAHGQPFGGRVITVKFGDYTRRI 278
Query: 23 GVDGTAE 3 GVDGTAE Sbjct: 279 GVDGTAE 285
>tr|Q9FX53|Q9FX53_ARATH DNA binding protein GT-1 (Putative uncharacterized protein At1g13450) OS=Arabidopsis thaliana GN=At1g13450 PE=2 SV=1 Length = 406
Score = 158 bits (399), Expect = 1e-37 Identities = 89/189 (47%), Positives = 118/189 (62%), Gaps = 27/189 (14%) Frame = -1
Query: 488 NTSKSNKHLWEQISFKMRKRGYDRSATMCTDKWRNLLKEYRKAKPFDRA-GSVKLSCYKE 312 NTSKSNKHLWEQIS KMR++G+DRS TMCTDKWRNLLKE++KAK DR GS K+S YKE Sbjct: 107 NTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNLLKEFKKAKHHDRGNGSAKMSYYKE 166
Query: 311 LEELLQQRPK---ASAYKLQGNS-------ESYIQYSLKG-------------PRASAVN 201 +E++L++R K Y N+ +S++Q++ KG A+N Sbjct: 167 IEDILRERSKKVTPPQYNKSPNTPPTSAKVDSFMQFTDKGFDDTSISFGSVEANGRPALN 226
Query: 200 IVRRLDTDGQISLALPSNATIVENGLQSWSWREAMTNGGD---RMYGGKVILVKFGEVMK 30 + RRLD DG + + NG+ W+WRE NG D + +GG+VI VKFG+ + Sbjct: 227 LERRLDHDGHPLAITTAVDAVAANGVTPWNWRETPGNGDDSHGQPFGGRVITVKFGDYTR 286
Query: 29 RIGVDGTAE 3 RIGVDG+AE Sbjct: 287 RIGVDGSAE 295
>tr|Q39116|Q39116_ARATH GT-1 protein OS=Arabidopsis thaliana GN=GT-1 PE=2 SV=1 Length = 406
Score = 158 bits (399), Expect = 1e-37 Identities = 89/189 (47%), Positives = 118/189 (62%), Gaps = 27/189 (14%) Frame = -1
Query: 488 NTSKSNKHLWEQISFKMRKRGYDRSATMCTDKWRNLLKEYRKAKPFDRA-GSVKLSCYKE 312 NTSKSNKHLWEQIS KMR++G+DRS TMCTDKWRNLLKE++KAK DR GS K+S YKE Sbjct: 107 NTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNLLKEFKKAKHHDRGNGSAKMSYYKE 166
Query: 311 LEELLQQRPK---ASAYKLQGNS-------ESYIQYSLKG-------------PRASAVN 201 +E++L++R K Y N+ +S++Q++ KG A+N Sbjct: 167 IEDILRERSKKVTPPQYNKSPNTPPTSAKVDSFMQFTDKGFDDTSISFGSVEANGRPALN 226
Query: 200 IVRRLDTDGQISLALPSNATIVENGLQSWSWREAMTNGGD---RMYGGKVILVKFGEVMK 30 + RRLD DG + + NG+ W+WRE NG D + +GG+VI VKFG+ + Sbjct: 227 LERRLDHDGHPLAITTAVDAVAANGVTPWNWRETPGNGDDSHGQPFGGRVITVKFGDYTR 286
Query: 29 RIGVDGTAE 3 RIGVDG+AE Sbjct: 287 RIGVDGSAE 295
>tr|A9UHK7|A9UHK7_SOYBN GT-1 OS=Glycine max PE=2 SV=1 Length = 376
Score = 153 bits (387), Expect = 4e-36 Identities = 85/180 (47%), Positives = 119/180 (66%), Gaps = 18/180 (10%) Frame = -1
Query: 488 NTSKSNKHLWEQISFKMRKRGYDRSATMCTDKWRNLLKEYRKAKPFDR-AGSVKLSCYKE 312 NTSKSNKHLWEQIS KMR++G+DRS TMCTDKWRNLLKE++KAK DR +GS K+S YKE Sbjct: 86 NTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGSGSAKMSYYKE 145
Query: 311 LEELLQQRPKASAYKL---QGNSESYIQYSLKGPRASAV-------------NIVRRLDT 180 ++E+L++R K YK +S++Q++ KG +++ N+ R LD Sbjct: 146 IDEILRERSKNVQYKSPTPPPKVDSFMQFADKGIDDTSISFGPVEATGRPTLNLERSLDH 205
Query: 179 DGQISLALPSNATIVENGLQSWSWREAMTNGGD-RMYGGKVILVKFGEVMKRIGVDGTAE 3 DG LA+ + + +G+ W+WRE NGG+ + G+VI VK+G+ +RIG+DGT E Sbjct: 206 DGH-PLAITTADAVAASGVPPWNWRETPGNGGESQSCCGRVISVKWGDYTRRIGIDGTPE 264
>tr|Q8GT42|Q8GT42_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=rml1 PE=2 SV=1 Length = 385
Score = 145 bits (365), Expect = 1e-33 Identities = 84/206 (40%), Positives = 121/206 (58%), Gaps = 44/206 (21%) Frame = -1
Query: 488 NTSKSNKHLWEQISFKMRKRGYDRSATMCTDKWRNLLKEYRKAKPFDRAGS--------- 336 NTSKSNKHLWE IS +MR++G+DRS TMCTDKWRNLLKE++KA+ R G Sbjct: 69 NTSKSNKHLWEAISARMREQGFDRSPTMCTDKWRNLLKEFKKARSHARGGGGGGVGGGGA 128
Query: 335 --------VKLSCYKELEELLQQRPK----------ASAYK---LQGNSESYIQYS---- 231 K++CYKE+++LL++R K + A K + +SY+Q+ Sbjct: 129 GTGGGNCPAKMACYKEIDDLLKRRGKPTGGGGAAVGSGAVKSPTVTSKIDSYLQFDKGFE 188
Query: 230 --------LKGPRASAVNIVRRLDTDGQISLALPSNATIVENGLQSWSWREAMTNGGDRM 75 ++ S +++ RL+ D LAL ++A + NG+ W+WR+ TNGGD Sbjct: 189 DASIPFGPVEASGRSLLSVEDRLEPDSH-PLALTADA-VATNGVNPWNWRDTSTNGGDNQ 246
Query: 74 --YGGKVILVKFGEVMKRIGVDGTAE 3 +GG+VILVK+G+ KRIG+DGTA+ Sbjct: 247 VTFGGRVILVKWGDYTKRIGIDGTAD 272
>tr|Q7XUC2|Q7XUC2_ORYSJ Os04g0486400 protein OS=Oryza sativa subsp. japonica GN=OJ000223_09.13 PE=2 SV=2 Length = 385
Score = 145 bits (365), Expect = 1e-33 Identities = 84/206 (40%), Positives = 121/206 (58%), Gaps = 44/206 (21%) Frame = -1
Query: 488 NTSKSNKHLWEQISFKMRKRGYDRSATMCTDKWRNLLKEYRKAKPFDRAGS--------- 336 NTSKSNKHLWE IS +MR++G+DRS TMCTDKWRNLLKE++KA+ R G Sbjct: 69 NTSKSNKHLWEAISARMREQGFDRSPTMCTDKWRNLLKEFKKARSHARGGGGGGVGGGGA 128
Query: 335 --------VKLSCYKELEELLQQRPK----------ASAYK---LQGNSESYIQYS---- 231 K++CYKE+++LL++R K + A K + +SY+Q+ Sbjct: 129 GTGGGNCPAKMACYKEIDDLLKRRGKPTGGGGAAVGSGAVKSPTVTSKIDSYLQFDKGFE 188
Query: 230 --------LKGPRASAVNIVRRLDTDGQISLALPSNATIVENGLQSWSWREAMTNGGDRM 75 ++ S +++ RL+ D LAL ++A + NG+ W+WR+ TNGGD Sbjct: 189 DASIPFGPVEASGRSLLSVEDRLEPDSH-PLALTADA-VATNGVNPWNWRDTSTNGGDNQ 246
Query: 74 --YGGKVILVKFGEVMKRIGVDGTAE 3 +GG+VILVK+G+ KRIG+DGTA+ Sbjct: 247 VTFGGRVILVKWGDYTKRIGIDGTAD 272
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