BP913018
Clone id YMU001_000025_E04
Library
Length 582
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000025_E04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGAGGCACTGGTGCATGGTGCAAACATTGCAGCCTTCTTACAACTTGCGGAGGCTATGCA
AGAGCAGGGAGTTGTCTAGCTCAGATTGAACTGGATTACCATTCTATCTATTTATAAGGT
TTCGCTGGCAATGAAGCTGAAGCCCATACCTGACGTTCTGTCGATGATGCACGTATAAGA
CGTGAGCGCTATCACACGCAGATCACTTCCTCGACCCAAAGTCCAGAGTATCAAAGGGAG
TTGCGGTTTGCTCAATGACCGGGCTTTTCTACTCTTCAATTACAGGCCCGGCCCATCAGT
TGGACCTTGGAAGGCCAAGTATGCGTTTCTACGAATGGAAAATGTATCATTGTGTAAGCA
TTCTTTAGTTGAGTGGTTGTATGTTAAAAGAAGAGGAGAGGTTGGTTTGTGTCAGTGCTG
CCTAGACACAGTCTAACCTGTTTCAACTTAGCTAACATCTTTCACTTTTGCCCATTTTGG
GGTGGCTGTGAATAATGCACAAGGATGTTCAAATCAGTATGTGAAGCTTGCTCTGCAGAA
GGTCAGCAGCTCTTTGTAAATTACAAAGGTTCTATATATTGT
■■Homology search results ■■ -
sp_hit_id P14657
Definition sp|P14657|DHE4_UNKP NADP-specific glutamate dehydrogenase OS=Unknown prokaryotic organism
Align length 22
Score (bit) 33.9
E-value 0.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913018|Adiantum capillus-veneris mRNA, clone:
YMU001_000025_E04.
(582 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P14657|DHE4_UNKP NADP-specific glutamate dehydrogenase OS=Unk... 34 0.60
sp|Q7V4G6|Y1986_PROMM UPF0367 protein PMT1986 OS=Prochlorococcus... 32 3.0
sp|P54387|DHE4_AGABI NADP-specific glutamate dehydrogenase OS=Ag... 31 3.9
sp|P39708|DHE5_YEAST NADP-specific glutamate dehydrogenase 2 OS=... 31 5.1
sp|Q96VJ7|DHE4_GIBFU NADP-specific glutamate dehydrogenase OS=Gi... 31 5.1
sp|P15111|DHE4_SALTY NADP-specific glutamate dehydrogenase OS=Sa... 30 6.7
sp|Q8Z6F6|DHE4_SALTI NADP-specific glutamate dehydrogenase OS=Sa... 30 6.7
sp|P18819|DHE4_EMENI NADP-specific glutamate dehydrogenase OS=Em... 30 6.7
sp|P00370|DHE4_ECOLI NADP-specific glutamate dehydrogenase OS=Es... 30 6.7
sp|P94598|DHE3_BACTN Glutamate dehydrogenase OS=Bacteroides thet... 30 6.7
sp|Q9V411|NOG1_DROME Probable nucleolar GTP-binding protein 1 OS... 30 8.7
sp|P07262|DHE4_YEAST NADP-specific glutamate dehydrogenase 1 OS=... 30 8.7
sp|Q8TFF6|DHE4_SACBA NADP-specific glutamate dehydrogenase 1 OS=... 30 8.7
sp|P29507|DHE4_DEBOC NADP-specific glutamate dehydrogenase OS=De... 30 8.7

>sp|P14657|DHE4_UNKP NADP-specific glutamate dehydrogenase
OS=Unknown prokaryotic organism GN=gdhA PE=3 SV=1
Length = 446

Score = 33.9 bits (76), Expect = 0.60
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +2

Query: 11 VHGANIAAFLQLAEAMQEQGVV 76
VHGANIA F+++AEAM QGV+
Sbjct: 425 VHGANIAGFVKVAEAMLAQGVL 446


>sp|Q7V4G6|Y1986_PROMM UPF0367 protein PMT1986 OS=Prochlorococcus
marinus (strain MIT 9313) GN=PMT1986 PE=3 SV=1
Length = 100

Score = 31.6 bits (70), Expect = 3.0
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +2

Query: 95 ITILSIYKVSLAMKLKPIPDVLSMMHV*DVSAI---TRRSLPRPKVQSIKGSCGLLNDR 262
++ LS+Y + LA+KL P+P + + D A+ R+ L R + ++ SC + D+
Sbjct: 9 LSTLSVYVIELALKLSPLPVSVQRKALTDAEAVYQQVRKCLERGQPHLLELSCEKVEDK 67


>sp|P54387|DHE4_AGABI NADP-specific glutamate dehydrogenase
OS=Agaricus bisporus GN=gdhA PE=3 SV=1
Length = 457

Score = 31.2 bits (69), Expect = 3.9
Identities = 12/22 (54%), Positives = 20/22 (90%)
Frame = +2

Query: 5 ALVHGANIAAFLQLAEAMQEQG 70
+L+ GAN+A F+++A+AM+EQG
Sbjct: 433 SLLSGANLAGFIKVADAMKEQG 454


>sp|P39708|DHE5_YEAST NADP-specific glutamate dehydrogenase 2
OS=Saccharomyces cerevisiae GN=GDH3 PE=1 SV=1
Length = 457

Score = 30.8 bits (68), Expect = 5.1
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +2

Query: 5 ALVHGANIAAFLQLAEAMQEQGVV 76
+LV GANIA+F+ +A+AM +QG V
Sbjct: 433 SLVKGANIASFVMVADAMLDQGDV 456


>sp|Q96VJ7|DHE4_GIBFU NADP-specific glutamate dehydrogenase
OS=Gibberella fujikuroi GN=GDH2 PE=3 SV=1
Length = 451

Score = 30.8 bits (68), Expect = 5.1
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +2

Query: 5 ALVHGANIAAFLQLAEAMQEQG 70
+L+ G+NIA F+++AEAM +QG
Sbjct: 427 SLIAGSNIAGFIKVAEAMHDQG 448


>sp|P15111|DHE4_SALTY NADP-specific glutamate dehydrogenase
OS=Salmonella typhimurium GN=gdhA PE=3 SV=2
Length = 447

Score = 30.4 bits (67), Expect = 6.7
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2

Query: 11 VHGANIAAFLQLAEAMQEQGVV 76
V GANIA F+++A+AM QGV+
Sbjct: 426 VQGANIAGFVKVADAMLAQGVI 447


>sp|Q8Z6F6|DHE4_SALTI NADP-specific glutamate dehydrogenase
OS=Salmonella typhi GN=gdhA PE=3 SV=1
Length = 447

Score = 30.4 bits (67), Expect = 6.7
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2

Query: 11 VHGANIAAFLQLAEAMQEQGVV 76
V GANIA F+++A+AM QGV+
Sbjct: 426 VQGANIAGFVKVADAMLAQGVI 447


>sp|P18819|DHE4_EMENI NADP-specific glutamate dehydrogenase
OS=Emericella nidulans GN=gdhA PE=3 SV=1
Length = 459

Score = 30.4 bits (67), Expect = 6.7
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +2

Query: 5 ALVHGANIAAFLQLAEAMQEQG 70
+LV G+NIA F ++AEAM++QG
Sbjct: 435 SLVTGSNIAGFTKVAEAMKDQG 456


>sp|P00370|DHE4_ECOLI NADP-specific glutamate dehydrogenase
OS=Escherichia coli (strain K12) GN=gdhA PE=1 SV=1
Length = 447

Score = 30.4 bits (67), Expect = 6.7
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2

Query: 11 VHGANIAAFLQLAEAMQEQGVV 76
V GANIA F+++A+AM QGV+
Sbjct: 426 VQGANIAGFVKVADAMLAQGVI 447


>sp|P94598|DHE3_BACTN Glutamate dehydrogenase OS=Bacteroides
thetaiotaomicron GN=gdhA PE=3 SV=2
Length = 444

Score = 30.4 bits (67), Expect = 6.7
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +2

Query: 11 VHGANIAAFLQLAEAMQEQGVV 76
V GAN+A F+++A+AM QG+V
Sbjct: 423 VKGANVAGFMKVAKAMMAQGIV 444


tr_hit_id A9RXU2
Definition tr|A9RXU2|A9RXU2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 25
Score (bit) 39.7
E-value 0.12
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913018|Adiantum capillus-veneris mRNA, clone:
YMU001_000025_E04.
(582 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9RXU2|A9RXU2_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.12
tr|A9RTS6|A9RTS6_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.12
tr|Q5JKR7|Q5JKR7_ORYSJ Putative NADP-specific glutamate dehydrog... 39 0.27
tr|B8AA37|B8AA37_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.27
tr|A6N065|A6N065_ORYSI NADP-specific glutamate dehydrogenase (Fr... 39 0.27
tr|Q9C8I0|Q9C8I0_ARATH NADP-specific glutatamate dehydrogenase, ... 38 0.47
tr|A9RG07|A9RG07_PHYPA Predicted protein OS=Physcomitrella paten... 36 1.4
tr|A7P6U7|A7P6U7_VITVI Chromosome chr9 scaffold_7, whole genome ... 35 3.0
tr|A5APE2|A5APE2_VITVI Putative uncharacterized protein OS=Vitis... 35 3.0
tr|A5N1R2|A5N1R2_CLOK5 Gdh OS=Clostridium kluyveri (strain ATCC ... 34 5.2
tr|A5D6B0|A5D6B0_PELTS Glutamate dehydrogenase/leucine dehydroge... 34 5.2
tr|A1JSP8|A1JSP8_YERE8 NADP-specific glutamate dehydrogenase OS=... 34 5.2
tr|B3T5T5|B3T5T5_9ZZZZ Putative glutamate/leucine/phenylalanine/... 34 6.8
tr|Q1WSM5|Q1WSM5_LACS1 NADP-specific glutamate dehydrogenase OS=... 34 6.8
tr|A6P2J2|A6P2J2_9BACE Putative uncharacterized protein OS=Bacte... 34 6.9
tr|Q24MK0|Q24MK0_DESHY Putative uncharacterized protein OS=Desul... 33 8.8
tr|A9BJ14|A9BJ14_PETMO Glutamate dehydrogenase (NADP(+)) OS=Petr... 33 8.8
tr|B8G0B1|B8G0B1_DESHD Glutamate dehydrogenase (NADP(+)) OS=Desu... 33 8.8
tr|A7J674|A7J674_PBCVF Putative uncharacterized protein N020L OS... 33 9.0

>tr|A9RXU2|A9RXU2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_179243 PE=3 SV=1
Length = 572

Score = 39.7 bits (91), Expect = 0.12
Identities = 18/25 (72%), Positives = 23/25 (92%)
Frame = +2

Query: 2 EALVHGANIAAFLQLAEAMQEQGVV 76
EAL+HGANIA+FL++A+AM EQG V
Sbjct: 548 EALLHGANIASFLRVAQAMLEQGCV 572


>tr|A9RTS6|A9RTS6_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_70453 PE=3 SV=1
Length = 578

Score = 39.7 bits (91), Expect = 0.12
Identities = 18/25 (72%), Positives = 23/25 (92%)
Frame = +2

Query: 2 EALVHGANIAAFLQLAEAMQEQGVV 76
EAL+HGANIA+FL++A+AM EQG V
Sbjct: 554 EALLHGANIASFLRVAQAMLEQGCV 578


>tr|Q5JKR7|Q5JKR7_ORYSJ Putative NADP-specific glutamate
dehydrogenase (NADP-GDH) (NADP-dependent glutamate
dehydrogenase) (Os01g0558200 protein) OS=Oryza sativa
subsp. japonica GN=B1064G04.5 PE=3 SV=1
Length = 640

Score = 38.5 bits (88), Expect = 0.27
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2

Query: 2 EALVHGANIAAFLQLAEAMQEQGVV 76
E+LVHGANI AFL +A+AM +QG V
Sbjct: 616 ESLVHGANICAFLNIAQAMTDQGCV 640


>tr|B8AA37|B8AA37_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_02416 PE=4 SV=1
Length = 556

Score = 38.5 bits (88), Expect = 0.27
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2

Query: 2 EALVHGANIAAFLQLAEAMQEQGVV 76
E+LVHGANI AFL +A+AM +QG V
Sbjct: 532 ESLVHGANICAFLNIAQAMTDQGCV 556


>tr|A6N065|A6N065_ORYSI NADP-specific glutamate dehydrogenase
(Fragment) OS=Oryza sativa subsp. indica PE=2 SV=1
Length = 166

Score = 38.5 bits (88), Expect = 0.27
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2

Query: 2 EALVHGANIAAFLQLAEAMQEQGVV 76
E+LVHGANI AFL +A+AM +QG V
Sbjct: 142 ESLVHGANICAFLNIAQAMTDQGCV 166


>tr|Q9C8I0|Q9C8I0_ARATH NADP-specific glutatamate dehydrogenase,
putative OS=Arabidopsis thaliana GN=F19C24.7 PE=3 SV=1
Length = 624

Score = 37.7 bits (86), Expect = 0.47
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2

Query: 2 EALVHGANIAAFLQLAEAMQEQGVV 76
EAL+HGA IAAFL +A+AM +QG V
Sbjct: 600 EALLHGATIAAFLNIAQAMTDQGCV 624


>tr|A9RG07|A9RG07_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_113728 PE=3 SV=1
Length = 579

Score = 36.2 bits (82), Expect = 1.4
Identities = 17/25 (68%), Positives = 22/25 (88%)
Frame = +2

Query: 2 EALVHGANIAAFLQLAEAMQEQGVV 76
EAL+ GANIA+FL++A+AM EQG V
Sbjct: 555 EALLDGANIASFLRVAQAMLEQGCV 579


>tr|A7P6U7|A7P6U7_VITVI Chromosome chr9 scaffold_7, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00034207001
PE=3 SV=1
Length = 449

Score = 35.0 bits (79), Expect = 3.0
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2

Query: 2 EALVHGANIAAFLQLAEAMQEQGVV 76
EALVHGA I+AFL +A+ M +QG V
Sbjct: 425 EALVHGAAISAFLTIAQGMTDQGCV 449


>tr|A5APE2|A5APE2_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_043645 PE=4 SV=1
Length = 638

Score = 35.0 bits (79), Expect = 3.0
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2

Query: 2 EALVHGANIAAFLQLAEAMQEQGVV 76
EALVHGA I+AFL +A+ M +QG V
Sbjct: 614 EALVHGAAISAFLTIAQGMTDQGCV 638


>tr|A5N1R2|A5N1R2_CLOK5 Gdh OS=Clostridium kluyveri (strain ATCC
8527 / DSM 555 / NCIMB 10680) GN=gdh PE=3 SV=1
Length = 443

Score = 34.3 bits (77), Expect = 5.2
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +2

Query: 17 GANIAAFLQLAEAMQEQGVV 76
GANIA FL++AEAM EQG+V
Sbjct: 424 GANIAGFLKVAEAMMEQGIV 443