BP913025 |
Clone id |
YMU001_000025_E11 |
Library |
YMU01 |
Length |
603 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000025_E11. |
Accession |
BP913025 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3259Contig1 |
Sequence |
AGGAAGGGGAGGCGTGCTGTGAGGACCTACAGCAAAAGATCAAGCTCAACAGACCATAAC GTGGGAGGCTCTTCTGTGGGCGCCCACTTGAAGACTATCCCGCTGATCTGAGCACCATCT TCCTTCCCTGCGATCTCTGTAGGATCTCAACTTGAAGAGACTAGTGATTGCGTGCTGCAT GTGGTGCCAAGGCCTTGTGTGTGCGTGTGTACCTGTCTGGACTGTGTGTTTGTATGTGTG TGAAGTGGGCGAGGATGACTTTGCCGCTCCCTCTACTGAAGAGAGTTGAGGAAATGGCTG GCATGAATCGAACCATATAAACATGGCCTCTCTGAGCCTTGTGTAATTGTGGTATGCATA TGTGCCTGTGATCGTTTTTGTCCCTAGGATTATGCATGCTCCTGTGGATGAGATTGAGGA TGAGGACCTGGCTTTATAGAGGTGTTGCCACTTTGCGATTGTTCGTGTGGCAGAGTGGTG TCAAGTGAAGCCTAGATTGATGATTTCGTCTTCCAGGTATTTAACGAAGGCTCTTCACAT TTGGAGAGGCTTCACCTGTCTACTGGAACATATATCTGAGATAAGGGAGCAGTCTTAGCG ATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54QR1 |
Definition |
sp|Q54QR1|LIMA_DICDI LIM domain-containing protein A OS=Dictyostelium discoideum |
Align length |
108 |
Score (bit) |
35.4 |
E-value |
0.22 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6ZQS2 |
Definition |
tr|Q6ZQS2|Q6ZQS2_HUMAN cDNA FLJ45585 fis, clone BRTHA3013882 OS=Homo sapiens |
Align length |
19 |
Score (bit) |
28.9 |
E-value |
0.36 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913025|Adiantum capillus-veneris mRNA, clone: YMU001_000025_E11. (603 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6ZQS2|Q6ZQS2_HUMAN cDNA FLJ45585 fis, clone BRTHA3013882 OS=... 29 0.36 tr|A1CKZ0|A1CKZ0_ASPCL Putative uncharacterized protein OS=Asper... 30 0.44 tr|Q4FY07|Q4FY07_LEIMA Putative uncharacterized protein OS=Leish... 38 0.52 tr|Q4T9Z6|Q4T9Z6_TETNG Chromosome undetermined SCAF7480, whole g... 28 1.6 tr|B4ML45|B4ML45_DROWI GK17362 OS=Drosophila willistoni GN=GK173... 35 2.6 tr|Q8QRV7|Q8QRV7_9BETA Transcriptional transactivator IRS1 OS=Pa... 35 3.4 tr|Q8QRS5|Q8QRS5_9BETA Transcriptional transactivator TRS1 OS=Pa... 35 3.4 tr|B5DQG4|B5DQG4_DROPS GA23347 OS=Drosophila pseudoobscura pseud... 35 3.4 tr|B4PJA3|B4PJA3_DROYA GE20521 OS=Drosophila yakuba GN=GE20521 P... 35 4.4 tr|Q4T1Z6|Q4T1Z6_TETNG Chromosome undetermined SCAF10407, whole ... 35 4.4 tr|A4I4A5|A4I4A5_LEIIN Putative uncharacterized protein OS=Leish... 35 4.4 tr|Q1ZJU2|Q1ZJU2_9VIBR PHP N-terminal domain protein OS=Vibrio a... 34 5.7 tr|Q9W2N8|Q9W2N8_DROME CG10543, isoform A OS=Drosophila melanoga... 34 5.7 tr|Q8MSN5|Q8MSN5_DROME AT15637p OS=Drosophila melanogaster GN=CG... 34 5.7 tr|Q8MLW9|Q8MLW9_DROME CG10543, isoform B OS=Drosophila melanoga... 34 5.7 tr|Q86BG2|Q86BG2_DROME CG10543, isoform C OS=Drosophila melanoga... 34 5.7 tr|B4QFK1|B4QFK1_DROSI GD11554 OS=Drosophila simulans GN=GD11554... 34 5.7 tr|B4I7H6|B4I7H6_DROSE GM15793 OS=Drosophila sechellia GN=GM1579... 34 5.7 tr|A4H649|A4H649_LEIBR Zinc-binding dehydrogenase-like protein O... 34 5.7 tr|B4HMS3|B4HMS3_DROSE GM21222 OS=Drosophila sechellia GN=GM2122... 34 7.5 tr|B5VPJ7|B5VPJ7_YEAS6 YMR070Wp-like protein (Fragment) OS=Sacch... 34 7.5 tr|B3LLW3|B3LLW3_YEAS1 2 Cys2-His2 zinc fingers at c-terminus OS... 34 7.5 tr|B2AYZ7|B2AYZ7_PODAN Predicted CDS Pa_1_12770 OS=Podospora ans... 34 7.5 tr|A9V3L4|A9V3L4_MONBE Predicted protein OS=Monosiga brevicollis... 26 8.6 tr|B3P6R2|B3P6R2_DROER GG11365 OS=Drosophila erecta GN=GG11365 P... 33 9.8 tr|P87584|P87584_9VIRU Capsid protein OS=Chipmunk parvovirus GN=... 33 9.9 tr|Q9I5N6|Q9I5N6_PSEAE Putative uncharacterized protein OS=Pseud... 33 9.9 tr|B7UZ39|B7UZ39_PSEAE Putative uncharacterized protein OS=Pseud... 33 9.9 tr|B4D4S8|B4D4S8_9BACT Putative uncharacterized protein OS=Chtho... 33 9.9 tr|A3LLN7|A3LLN7_PSEAE Putative uncharacterized protein OS=Pseud... 33 9.9
>tr|Q6ZQS2|Q6ZQS2_HUMAN cDNA FLJ45585 fis, clone BRTHA3013882 OS=Homo sapiens PE=2 SV=1 Length = 201
Score = 28.9 bits (63), Expect(2) = 0.36 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +2
Query: 185 CQGLVCACVPVWTVCLYVC 241 C+G VC CV V +C+ VC Sbjct: 8 CEGCVCVCVCVCVLCVSVC 26
Score = 27.7 bits (60), Expect(2) = 0.36 Identities = 15/46 (32%), Positives = 18/46 (39%) Frame = +1
Query: 340 CVIVVCICACDRFCP*DYACSCG*D*G*GPGFIEVLPLCDCSCGRV 477 C++ VC+C C C C C L LC C CG V Sbjct: 63 CLVSVCLCVCLCVCVSVCLCVC-------------LHLCVCVCGFV 95
>tr|A1CKZ0|A1CKZ0_ASPCL Putative uncharacterized protein OS=Aspergillus clavatus GN=ACLA_040300 PE=4 SV=1 Length = 423
Score = 29.6 bits (65), Expect(2) = 0.44 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 6/81 (7%) Frame = -1
Query: 288 QLSSVEGAAKSSSPT-SHTYKHTVQ-----TGTHAHTRPWHHMQHAITSLFKLRSYRDRR 127 Q+S SS P+ +H+ H + TG A++RP HH Q + S+ +Y R Sbjct: 293 QISHQAPPPPSSRPSDAHSTLHLSRPGSPVTGNGANSRPTHHRQRSDASI----AYDSRM 348
Query: 126 EGRWCSDQRDSLQVGAHRRAS 64 R DQR AHR +S Sbjct: 349 RDRQDPDQRIVPPSLAHRASS 369
Score = 26.6 bits (57), Expect(2) = 0.44 Identities = 18/58 (31%), Positives = 22/58 (37%), Gaps = 5/58 (8%) Frame = -2
Query: 482 DTTLPHEQSQSGNTSIKPGPH-PQSHP----QEHA*S*GQKRSQAHMHTTITQGSERP 324 +T LPH NT PGP P S P EH Q + H + G +P Sbjct: 200 ETQLPHPPVTRNNTQYGPGPSLPPSQPAAIKPEHPHPPRQSPPSLYFHHWVPPGHSQP 257
>tr|Q4FY07|Q4FY07_LEIMA Putative uncharacterized protein OS=Leishmania major strain Friedlin GN=LMJ_0688 PE=4 SV=1 Length = 3008
Score = 37.7 bits (86), Expect = 0.52 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 7/77 (9%) Frame = -1
Query: 270 GAAKSSSPTSHT---YKHTVQTGTHAHTRPWHHMQHA---ITSLFKLRSYRDRREGRWCS 109 GAA+ +SP S + Y H H + RP HH +H S K R R ++ G Sbjct: 2027 GAARDASPLSSSPSSYSHASPARVHPNRRPSHHRRHCDGPAASQKKSREERRKQRGSGQE 2086
Query: 108 DQRD-SLQVGAHRRASH 61 +RD +G HR+ H Sbjct: 2087 SRRDGDASLGHHRQHRH 2103
>tr|Q4T9Z6|Q4T9Z6_TETNG Chromosome undetermined SCAF7480, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00004514001 PE=4 SV=1 Length = 328
Score = 28.1 bits (61), Expect(2) = 1.6 Identities = 10/17 (58%), Positives = 14/17 (82%) Frame = +3
Query: 192 ALCVRVYLSGLCVCMCV 242 ALCV ++L +CVC+CV Sbjct: 45 ALCVYLWLEPVCVCVCV 61
Score = 26.2 bits (56), Expect(2) = 1.6 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +1
Query: 334 EPCVIVVCICACDRFCP*DYACSCG 408 EP + VC+CAC R P SCG Sbjct: 53 EPVCVCVCVCACVRAPP---VQSCG 74
>tr|B4ML45|B4ML45_DROWI GK17362 OS=Drosophila willistoni GN=GK17362 PE=4 SV=1 Length = 1652
Score = 35.4 bits (80), Expect = 2.6 Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 8/131 (6%) Frame = -2
Query: 548 LSKCEEPSLNTWKTKSSI*A--------SLDTTLPHEQSQSGNTSIKPGPHPQSHPQEHA 393 LS EP+ T T SS A S TTL Q Q ++ P P PQ++ +A Sbjct: 978 LSSAHEPTATTAATSSSAAAAAAAAATSSAATTLSSTQPQ---LNLAPPPVPQTNQNNNA 1034
Query: 392 *S*GQKRSQAHMHTTITQGSERPCLYGSIHASHFLNSLQ*RERQSHPRPLHTHTNTQSRQ 213 S + S A + + + + Y + LQ + +Q H + L H Q +Q Sbjct: 1035 ES--AQPSWASLFASSKKPVAKVAPYEANKPQQQQQPLQ-QHQQQHQQQLQQHQQQQQQQ 1091
Query: 212 VHTHTQGLGTT 180 HT TQ + ++ Sbjct: 1092 QHTQTQQMSSS 1102
>tr|Q8QRV7|Q8QRV7_9BETA Transcriptional transactivator IRS1 OS=Panine herpesvirus 2 PE=4 SV=1 Length = 936
Score = 35.0 bits (79), Expect = 3.4 Identities = 25/56 (44%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Frame = -2
Query: 257 HPR--PLHTHT-NTQSRQVHTHTQGLGTTCSTQSLVSSS*DPTEIAGKEDGAQISG 99 HP PL THT NTQ V H TC+ +SSS PT AG GA SG Sbjct: 430 HPAGAPLITHTANTQGHGVAPHNSS-AATCAVSPPLSSSAGPTSAAGTAAGATSSG 484
>tr|Q8QRS5|Q8QRS5_9BETA Transcriptional transactivator TRS1 OS=Panine herpesvirus 2 PE=4 SV=1 Length = 852
Score = 35.0 bits (79), Expect = 3.4 Identities = 25/56 (44%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Frame = -2
Query: 257 HPR--PLHTHT-NTQSRQVHTHTQGLGTTCSTQSLVSSS*DPTEIAGKEDGAQISG 99 HP PL THT NTQ V H TC+ +SSS PT AG GA SG Sbjct: 430 HPAGAPLITHTANTQGHGVAPHNSS-AATCAVSPPLSSSAGPTSAAGTAAGATSSG 484
>tr|B5DQG4|B5DQG4_DROPS GA23347 OS=Drosophila pseudoobscura pseudoobscura GN=GA23347 PE=4 SV=1 Length = 494
Score = 35.0 bits (79), Expect = 3.4 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = -2
Query: 305 HASHFLNSLQ*RERQSHPR-PLHTHTNTQSRQVHTHTQGLGTTCSTQSL 162 H H Q +++Q H + P HTHT+T H H Q LG + SL Sbjct: 240 HHHHHQQQQQQQQQQQHSQAPQHTHTHTHQHAHHPHHQLLGAAAAAASL 288
>tr|B4PJA3|B4PJA3_DROYA GE20521 OS=Drosophila yakuba GN=GE20521 PE=4 SV=1 Length = 441
Score = 34.7 bits (78), Expect = 4.4 Identities = 29/92 (31%), Positives = 38/92 (41%), Gaps = 6/92 (6%) Frame = -2
Query: 425 PHPQSHPQEHA*S*GQKRSQAHMHT-----TITQGSERPCLYGSIHASHFLNSLQ*RERQ 261 PHPQS PQ Q R Q H H Q RP +H H + +Q Q Sbjct: 77 PHPQSQPQ------AQLRQQPHTHPHSHSHPHPQLQRRP--VEQLHLLHSHHDVQELSGQ 128
Query: 260 SHPRP-LHTHTNTQSRQVHTHTQGLGTTCSTQ 168 HP P H+H++ Q+ H H L + S + Sbjct: 129 EHPHPHSHSHSHPQAGS-HPHPHHLRSPSSEE 159
>tr|Q4T1Z6|Q4T1Z6_TETNG Chromosome undetermined SCAF10407, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00008571001 PE=4 SV=1 Length = 2059
Score = 34.7 bits (78), Expect = 4.4 Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 5/81 (6%) Frame = -1
Query: 399 ACIILGTKTITGTYAYHNYTRLREAMFIWFDSCQPFPQLSSVEGAAKSSSPTSHTYKHT- 223 AC++ + + +H + LR+ + S LSS+ K+SS +HT+ HT Sbjct: 1058 ACVLESRRILLPVVLHHIHLHLRQQKELLICS----GILSSIFSIIKTSSLVTHTHTHTH 1113
Query: 222 ----VQTGTHAHTRPWHHMQH 172 T TH HT H H Sbjct: 1114 THTHTHTHTHTHTHTHTHTPH 1134
|