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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913027
Clone id YMU001_000025_F01
Library
Length 537
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000025_F01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AATCACCAAAATATAACTGTAGATTGCCAGGTACGATCAGGTCAAGCTCCGTATTGAACT
CAACTTGCCTTCGACCTCCTCTCTCTTTTTTGGCAGTGCTGGCTCCTCTTCTTCATACCC
TCTCTAACTCTACTGCTGAGCTCGACCTTTACTCTACAAATGGCTAGCACCCTCAGCTCT
TTGCCTTCATCACCTACATTTGTTCTCTTCACGTGCAGGCTCAGCCCTCAACACCAGCTG
CTGCTTCTTTCCAGCACACGGACCCCCAAGCATGGGCTCCTTCCTCCTCTGAACCTGGCC
GCCCCTGCTCTGAATGGCGTTGATCCTCCTCAGAGCTTCTCCGCAGGCTTCATGAGCCCT
CCTTCATGCTGTTCCGGAGCTTCTTGGCCCCTTCCTCTCCTCACCCTCTTGGCGCAGTTT
GTGTAGCATGGCCTCCTCAACAATCTGAGCCTCCCTCCACGTATGCTATCAAAGCCTCCC
TTGCCCAGCTCTTCTCTCGGCTTCTGCAATAGCCCCGATAACCTTCTCTCTCGAGTA
■■Homology search results ■■ -
sp_hit_id Q9QWT9
Definition sp|Q9QWT9|KIFC1_MOUSE Kinesin-like protein KIFC1 OS=Mus musculus
Align length 163
Score (bit) 35.8
E-value 0.14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913027|Adiantum capillus-veneris mRNA, clone:
YMU001_000025_F01.
         (537 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9QWT9|KIFC1_MOUSE Kinesin-like protein KIFC1 OS=Mus musculus...    36   0.14 
sp|Q5R3K3|FA26F_HUMAN Protein FAM26F OS=Homo sapiens GN=FAM26F P...    31   3.3  
sp|A4JDX1|IF2_BURVG Translation initiation factor IF-2 OS=Burkho...    31   3.4  
sp|Q8N661|TM86B_HUMAN Transmembrane protein 86B OS=Homo sapiens ...    30   9.7  
sp|P12349|PER_DROVI Period circadian protein OS=Drosophila viril...    30   9.7  
sp|Q67P86|IF2_SYMTH Translation initiation factor IF-2 OS=Symbio...    30   9.7  
sp|Q60443|KIFC1_CRIGR Kinesin-like protein KIFC1 OS=Cricetulus g...    30   9.8  
sp|P84781|ITR3_SPIOL Trypsin inhibitor 3 OS=Spinacia oleracea PE...    30   9.8  
sp|P84780|ITR2_SPIOL Trypsin inhibitor 2 OS=Spinacia oleracea PE...    30   9.8  
sp|P84779|ITR1_SPIOL Trypsin inhibitor 1 OS=Spinacia oleracea PE...    30   9.8  

>sp|Q9QWT9|KIFC1_MOUSE Kinesin-like protein KIFC1 OS=Mus musculus
           GN=Kifc1 PE=1 SV=2
          Length = 674

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 1/163 (0%)
 Frame = -1

Query: 531 REKVIGAIAEAERRAGQGRL**HTWREAQIVEEAMLHKLRQEGEERKGPRSSGTA*RRAH 352
           R +V+GA+ + +    +G L          V +   H   Q+G ++ GPR          
Sbjct: 54  RTRVMGAVTKVDTSRPRGPL-------LSTVSQTQGHTAAQKGPKKTGPRGCS------- 99

Query: 351 EACGEALRRINAIQSRGGQVQRRKE-PMLGGPCAGKKQQLVLRAEPAREENKCR**RQRA 175
            A G  LR    + +   Q       P++ G  AGK+    L+ +      + +  R++ 
Sbjct: 100 -AIGTVLRSQKPVPAAPAQKPGTSTAPVVVGKRAGKRPAWDLKGQLCDLNEELKRYREKT 158

Query: 174 EGASHL*SKGRAQQ*S*RGYEEEEPALPKKREEVEGKLSSIRS 46
           +    L ++G  +Q   R  +E+   L  +R  +EG+L+S+RS
Sbjct: 159 Q-TLELENRGLREQL--REVQEQATTLGTERNTLEGELASVRS 198


>sp|Q5R3K3|FA26F_HUMAN Protein FAM26F OS=Homo sapiens GN=FAM26F PE=2
           SV=1
          Length = 315

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = +2

Query: 380 LLGPFLSSPSWRSLCSMASSTI*ASLHVCYQSLPCPALLSASAIAPITF 526
           LLG  LS+ +WR L    SS   +       SL C  + +A+A+AP+T+
Sbjct: 65  LLGYVLSARTWRLLTGCCSSARASCGSALRGSLVCTQISAAAALAPLTW 113


>sp|A4JDX1|IF2_BURVG Translation initiation factor IF-2
           OS=Burkholderia vietnamiensis (strain G4 / LMG 22486)
           GN=infB PE=3 SV=1
          Length = 974

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 8/163 (4%)
 Frame = -1

Query: 507 AEAERRAGQGRL**HTWREAQIVEEAMLHKL-------RQEGEERKGPRSSGTA*RRAHE 349
           AE +RR  + R      REA+++E+     L       R+E E R    ++    RRA E
Sbjct: 120 AELKRREEEAR------REAELLEQQAQELLERQERLEREEAERRAREEAAEAERRRAEE 173

Query: 348 ACGEALRRINAIQSRGGQVQRRKEPMLGGPCAGKKQQLVLRAEPAREENKCR**RQRAEG 169
                     A  ++    Q+  E     P A   Q+    A  A E    R   ++AE 
Sbjct: 174 EAAAKRAAAEAAAAQQAAAQQAAEAKQEAPGAQSAQE---EARAAAERAAQREAAKKAED 230

Query: 168 AS-HL*SKGRAQQ*S*RGYEEEEPALPKKREEVEGKLSSIRSL 43
           A+     K RA+Q      EE    + K+RE  E +  +IR +
Sbjct: 231 AAREAADKARAEQ------EE----IRKRREAAEAEARAIREM 263


>sp|Q8N661|TM86B_HUMAN Transmembrane protein 86B OS=Homo sapiens
           GN=TMEM86B PE=2 SV=1
          Length = 226

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 18/91 (19%)
 Frame = +2

Query: 221 SALNTSCCFFPAHGPPSMGSF----LL*TW--------PPLL*MALILLRASPQAS*ALL 364
           SA+  +C  +PA   P M +F    LL  W        P LL   LI+L   P  S  L 
Sbjct: 84  SAVGDACLIWPAAFVPGMAAFATAHLLYVWAFGFSPLQPGLL--LLIILAPGPYLSLVLQ 141

Query: 365 HAVPELL------GPFLSSPSWRSLCSMASS 439
           H  P+++      G  L +  WR L    S+
Sbjct: 142 HLEPDMVLPVAAYGLILMAMLWRGLAQGGSA 172


>sp|P12349|PER_DROVI Period circadian protein OS=Drosophila virilis
            GN=per PE=3 SV=1
          Length = 1087

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
 Frame = +3

Query: 69   LRPPLSFLAVLAPLLHTLSNSTAELDLYSTNG*HPQLF---AFITYICSLHVQAQPSTPA 239
            L PP S L +  P +HT   S A+      +   P  +   A +    +    AQ S  +
Sbjct: 814  LWPPFS-LGLTTPTVHTTHTSMAQKSFSPQHNLFPAFYYIPAPLATATAGSAAAQTSVSS 872

Query: 240  AASFQHTDPQAWAPSSSEP 296
            A++ QH+   +  PS+S+P
Sbjct: 873  ASAAQHSPKSSENPSTSQP 891


>sp|Q67P86|IF2_SYMTH Translation initiation factor IF-2
           OS=Symbiobacterium thermophilum GN=infB PE=3 SV=1
          Length = 1044

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +3

Query: 234 PAAASFQHTDPQAWAPSSSEPGRP 305
           PAAA+ +  +PQA AP +S P RP
Sbjct: 271 PAAAAERREEPQAEAPQTSGPSRP 294


>sp|Q60443|KIFC1_CRIGR Kinesin-like protein KIFC1 OS=Cricetulus
           griseus PE=2 SV=1
          Length = 622

 Score = 29.6 bits (65), Expect = 9.8
 Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 2/119 (1%)
 Frame = -1

Query: 396 RKGPRSSGTA*RRAHEACGEALRRINAIQSRGGQVQRRKEPMLGGPCAGKKQQLVLRAE- 220
           +KGP+ +G    R   A G  L+      +   Q   RK P       GK+    L+ + 
Sbjct: 44  QKGPKKTGP---RGCTAVGSVLKNQKLAPTAPAQKPVRKRP-------GKRPDWDLKGQL 93

Query: 219 -PAREENKCR**RQRAEGASHL*SKGRAQQ*S*RGYEEEEPALPKKREEVEGKLSSIRS 46
               EE KC       E    L  + +  Q   +  +E+  AL  +R  +EG+L+S+R+
Sbjct: 94  CDLTEELKCY-----REKTQKLDQENQGLQEQLKEAQEQAAALGTERNTLEGELASVRT 147


>sp|P84781|ITR3_SPIOL Trypsin inhibitor 3 OS=Spinacia oleracea PE=1
           SV=1
          Length = 37

 Score = 29.6 bits (65), Expect = 9.8
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 325 PPQSFSAGFMSPPSCCSGASWPLPLLTL 408
           P  +  +GF  P  CCSGA  P P+L +
Sbjct: 6   PSGAICSGFGPPEQCCSGACVPHPILRI 33


>sp|P84780|ITR2_SPIOL Trypsin inhibitor 2 OS=Spinacia oleracea PE=1
           SV=1
          Length = 36

 Score = 29.6 bits (65), Expect = 9.8
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 325 PPQSFSAGFMSPPSCCSGASWPLPLLTL 408
           P  +  +GF  P  CCSGA  P P+L +
Sbjct: 5   PSGAICSGFGPPEQCCSGACVPHPILRI 32


>sp|P84779|ITR1_SPIOL Trypsin inhibitor 1 OS=Spinacia oleracea PE=1
           SV=1
          Length = 35

 Score = 29.6 bits (65), Expect = 9.8
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 325 PPQSFSAGFMSPPSCCSGASWPLPLLTL 408
           P  +  +GF  P  CCSGA  P P+L +
Sbjct: 4   PSGAICSGFGPPEQCCSGACVPHPILRI 31
tr_hit_id B2B210
Definition tr|B2B210|B2B210_PODAN Predicted CDS Pa_6_5150 (Fragment) OS=Podospora anserina
Align length 99
Score (bit) 36.2
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913027|Adiantum capillus-veneris mRNA, clone:
YMU001_000025_F01.
         (537 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B2B210|B2B210_PODAN Predicted CDS Pa_6_5150 (Fragment) OS=Pod...    36   1.1  
tr|Q383M5|Q383M5_9TRYP Putative uncharacterized protein OS=Trypa...    36   1.5  
tr|A2G691|A2G691_TRIVA Trichohyalin, putative OS=Trichomonas vag...    33   7.3  
tr|A2DES2|A2DES2_TRIVA Putative uncharacterized protein OS=Trich...    33   9.5  

>tr|B2B210|B2B210_PODAN Predicted CDS Pa_6_5150 (Fragment)
           OS=Podospora anserina PE=4 SV=1
          Length = 694

 Score = 36.2 bits (82), Expect = 1.1
 Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
 Frame = -1

Query: 537 YSREKVIGAIAEAER--RAGQGRL**HTWREAQIVEEAMLHKLRQEGEERKGPRSSGTA* 364
           + +EK     ++ E   RAGQ R     W E Q  EE  + +  ++ + ++  R+S    
Sbjct: 555 WKKEKAARVASQQENGERAGQKRKTNEAWSEKQDAEELKVARREKKRKRKEAERASKMTE 614

Query: 363 RRAHEACG-----EALRRINAIQSRGGQVQRRKEPMLGG 262
           R   E        E +R+ N  ++R    +RRKE +LGG
Sbjct: 615 REREEHMKLEDMIELVRKQNEEKARQEAEERRKERVLGG 653


>tr|Q383M5|Q383M5_9TRYP Putative uncharacterized protein
           OS=Trypanosoma brucei GN=Tb11.01.2310 PE=4 SV=1
          Length = 855

 Score = 35.8 bits (81), Expect = 1.5
 Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 1/155 (0%)
 Frame = -1

Query: 504 EAERRAGQGRL**HTWREAQIVEEAMLHKLRQEGEERKGPRSSGTA*RRAHEACGEALRR 325
           E ER  G      ++ RE + +E A+     +E    K    + T  +R  E      + 
Sbjct: 508 EVERLTGT-----YSSREKEFIENAIFTNAEKETLRAKVEELTATLEKRKEEHANHVQQI 562

Query: 324 INAIQSRGGQVQRRKEPMLGGPCAGKKQQLVLRAEPAREENKCR**RQRAEGASHL*SKG 145
              +     +++R             KQQL+L+AE           ++RAEGA    S  
Sbjct: 563 TTDLMDLRDRLEREIS----------KQQLLLKAE-----------KERAEGAEEEVSSL 601

Query: 144 RAQQ*S*RGYEEEEPALPKKREEVEGKL-SSIRSL 43
           + Q     GY  E   L +KREE+EG + + IR L
Sbjct: 602 KRQV---SGYVAEVGLLNRKREEIEGTMKAEIRDL 633


>tr|A2G691|A2G691_TRIVA Trichohyalin, putative OS=Trichomonas
           vaginalis G3 GN=TVAG_345110 PE=4 SV=1
          Length = 518

 Score = 33.5 bits (75), Expect = 7.3
 Identities = 36/144 (25%), Positives = 58/144 (40%)
 Frame = -1

Query: 507 AEAERRAGQGRL**HTWREAQIVEEAMLHKLRQEGEERKGPRSSGTA*RRAHEACGEALR 328
           AE ER+  +        R+ Q  EE    K ++  EERK         R+  EA  E   
Sbjct: 290 AEEERKRKEQEAEEERKRKEQEAEEERKRKEQEAEEERK---------RKEQEAEAEEEE 340

Query: 327 RINAIQSRGGQVQRRKEPMLGGPCAGKKQQLVLRAEPAREENKCR**RQRAEGASHL*SK 148
           R    Q    + +R+++         ++++    AE   EE K +     AE       +
Sbjct: 341 RKRKEQEAEAEEERKRKEQEAEAEEEERKRKEQEAEAEEEERKRKEQEAEAEEEERKRKE 400

Query: 147 GRAQQ*S*RGYEEEEPALPKKREE 76
             A++   R  +EEE  + K+REE
Sbjct: 401 QEAEEERKRKEQEEEERIRKQREE 424


>tr|A2DES2|A2DES2_TRIVA Putative uncharacterized protein
           OS=Trichomonas vaginalis G3 GN=TVAG_283680 PE=4 SV=1
          Length = 677

 Score = 33.1 bits (74), Expect = 9.5
 Identities = 45/177 (25%), Positives = 76/177 (42%), Gaps = 16/177 (9%)
 Frame = -1

Query: 528 EKVIGAIAEAERR--AGQGRL**HTWREAQIVEEA---MLHKLRQEGEERKGPRSSGTA* 364
           EK    +AE E+R    + R+     + A   EEA   M+ ++R EGE+++    S    
Sbjct: 421 EKARAELAEIEKRNALARERIRKEEEQRAAQAEEAKQRMIAQIRAEGEKKEAELRS---- 476

Query: 363 RRAHEACGEALR---RINAIQSRGGQVQRRKEPMLGGPCAGK------KQQLVLRAEPAR 211
            + H A  E  +   R+  +Q+   Q++   + M G     +      KQ LV   E  R
Sbjct: 477 -QLHAAKKEKKQLEGRLQQLQTEAAQMEATLQKMRGNLSTAEAESSRVKQLLVADKEAQR 535

Query: 210 EEN--KCR**RQRAEGASHL*SKGRAQQ*S*RGYEEEEPALPKKREEVEGKLSSIRS 46
           +    + R  ++RAE    L              EEEE  L ++ +E++ +  S+RS
Sbjct: 536 QSELEEARLEKRRAELEKQL-----------ANLEEEEQNLDREEKELDKRCQSVRS 581