BP913038 [AcEST]

BP913038
Clone id	YMU001_000025_G01
Library	YMU01
Length	564
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000025_G01.
Accession	BP913038
Tissue type	prothallium
Developmental stage	-
Contig ID	CL793Contig1
Sequence	CATCGGTCACATAATCCTTGAATTTTGTCTTCTTCACCTGTGTTGGTTTCCCCATGTGTT CTTGTGTTTTCTTTCCCTAGATCCTGCATTACAGTCTTAGAAGTTTTCGGAGCTTTAGGC TGTAATAAAGCTTGAGTAGAGGCTCAACAAGTCTTTTGTACACTTTCAATCTTTTGGTTT TGTCTTATGGATGCGGATAGGTCAGTAGTGTTTGTTCTAAAGTTTGGTTGTTATCGAGTC TAGCCGCATAGGATTGCAATATCGTGTCTAGTTGCTCGTTCACCGTTACAGACTTAGAAG TTTTTGGAGCTTCAGGCTATTATAGGGCTTGAGTAGTCTCAAAAAGTCTTTTGTACACTT CCAATCTTTTGGTTGTCTTATGGATGCGGATAGGTTAGTCCTAAAGTTTGGTTATTATTG AGTCTAGCTGCATAGGATTGCAATATCGTGTCTAGTTGCTTATTCATCTTTTCTACCAAG ATTGCTCGTTCACTCTTTCTACCAAGATTGAACCTCCCAATGACATTTTTGATGATTTTT CTTTCTCTATTTATATTTTGTTTT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP913038\|Adiantum capillus-veneris mRNA, clone: YMU001_000025_G01. (564 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	B4WJ77
Definition	tr\|B4WJ77\|B4WJ77_9SYNE Integral membrane protein DUF6 OS=Synechococcus sp. PCC 7335
Align length	65
Score (bit)	33.9
E-value	6.4
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP913038\|Adiantum capillus-veneris mRNA, clone: YMU001_000025_G01. (564 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|B4WJ77\|B4WJ77_9SYNE Integral membrane protein DUF6 OS=Synecho... 34 6.4 >tr\|B4WJ77\|B4WJ77_9SYNE Integral membrane protein DUF6 OS=Synechococcus sp. PCC 7335 GN=S7335_5002 PE=4 SV=1 Length = 303 Score = 33.9 bits (76), Expect = 6.4 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Frame = +1 Query: 346 VFCTLPIFWLSYGCGVSPKVWLLLSLAADCNIVSSCLFIFSTKIA-RSLFLPRLNLPM 522 V LPI W S G + P W L + NI++ L++ + KIA SL +P + L Sbjct: 41 VVLMLPILWFSGGIPTLEPNFWWALLIGG-GLNILAFTLYVRAIKIADLSLTVPLVTLTP 99 Query: 523 TFLMI 537 FL+I Sbjct: 100 LFLLI 104