BP913051
Clone id YMU001_000025_H07
Library
Length 561
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000025_H07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTTTTTACACAAAACTTCCATTAAGGGCATGCGTTGAGCACTATGTAACAATATACAAA
GCATAGCTTGCTTGCAAGTGCGCTTACAAGCAGCAAAAATGCTGTTTACAAATCCTGCAG
CCCTCAAAAACTCAATGAACTCCGCACATATAATCCTAGCATAATGTGAAGTCACCCACC
TTCGTACATGATAACCACTGCATGGAAAGATCCTTCAAAATAGCTCTCGATGTCTATGCT
GAGCGCCTTCTCTTGGAGCGCTTACTTCGTTTTGAGGCAGCGGAAGTTGCAGCAGCCTCA
CTTTTGCTATAAATCTCCTCCAAAGAGTCCTTCGCAGAAGCAATGTTATCAGACTCGACC
CCATCATTCTCTACGTCAGATTCAGATGTAGCAGCAGTTGTCAAATTGACTGAATTATCG
GTTGGTTTGACAGCTATAGCTTGCTCCGCCTTTCTTTGCGCTTTCTCTGCCTTTAGCTGC
TTGAACCTCTCTCCTCGTCGCTCTTTTCTCTCAATGACTGGTGCGTCACTTGAGCGCAGC
GCTTGCCCTGCTGTTATAATT
■■Homology search results ■■ -
sp_hit_id Q9Y1T5
Definition sp|Q9Y1T5|SUH_DROSI Protein suppressor of hairless (Fragment) OS=Drosophila simulans
Align length 41
Score (bit) 30.0
E-value 8.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913051|Adiantum capillus-veneris mRNA, clone:
YMU001_000025_H07.
(561 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9Y1T5|SUH_DROSI Protein suppressor of hairless (Fragment) OS... 30 8.1
sp|P28159|SUH_DROME Suppressor of hairless protein OS=Drosophila... 30 8.1

>sp|Q9Y1T5|SUH_DROSI Protein suppressor of hairless (Fragment)
OS=Drosophila simulans GN=Su(H) PE=3 SV=1
Length = 102

Score = 30.0 bits (66), Expect = 8.1
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2

Query: 275 RQRKLQQPHFCYKSPPKSPSQKQCYQTRPHHSLRQIQM*QQ 397
+Q+ PHF P SQ+Q Q + HH +Q Q QQ
Sbjct: 15 QQQSQDMPHFGLPGPQPPSSQQQQQQMQVHHQQQQQQQQQQ 55


>sp|P28159|SUH_DROME Suppressor of hairless protein OS=Drosophila
melanogaster GN=Su(H) PE=1 SV=1
Length = 594

Score = 30.0 bits (66), Expect = 8.1
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2

Query: 275 RQRKLQQPHFCYKSPPKSPSQKQCYQTRPHHSLRQIQM*QQ 397
+Q+ PHF P SQ+Q Q + HH +Q Q QQ
Sbjct: 38 QQQSQDMPHFGLPGPQPPSSQQQQQQLQVHHQQQQQQQQQQ 78


tr_hit_id B8LKE4
Definition tr|B8LKE4|B8LKE4_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 90
Score (bit) 39.7
E-value 0.11
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913051|Adiantum capillus-veneris mRNA, clone:
YMU001_000025_H07.
(561 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8LKE4|B8LKE4_PICSI Putative uncharacterized protein OS=Picea... 40 0.11
tr|B8LKB2|B8LKB2_PICSI Putative uncharacterized protein OS=Picea... 38 0.43

>tr|B8LKE4|B8LKE4_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 471

Score = 39.7 bits (91), Expect = 0.11
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Frame = -2

Query: 560 IITAGQALRSSDAPVIERKE-RRGERF--XXXXXXXXXXXXXXAIAVKPTDNSVNLTTAA 390
II+AGQA RSS V + KE RRGERF + +V T +
Sbjct: 357 IISAGQAKRSSSKAVTDLKEARRGERFRQRKAEEARKKADPERQTTTDVKEQNVYQTVSL 416

Query: 389 TSESD---VENDGVESDNIASAKDSLEEIY 309
+SESD E DG ++ I+S ++SLE++Y
Sbjct: 417 SSESDDDQEEKDG-KAKTISSEQESLEQVY 445


>tr|B8LKB2|B8LKB2_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 471

Score = 37.7 bits (86), Expect = 0.43
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Frame = -2

Query: 560 IITAGQALRSSDAPVIERKE-RRGERF--XXXXXXXXXXXXXXAIAVKPTDNSVNLTTAA 390
II+AGQA RSS V + KE RRGERF + +V T +
Sbjct: 357 IISAGQAKRSSSKAVTDLKEARRGERFRQRKAEEARKKADPERQTTTDVEEQNVYQTVSL 416

Query: 389 TSESD---VENDGVESDNIASAKDSLEEIY 309
+SE D E DG ++ I+S ++SLE++Y
Sbjct: 417 SSERDDYQEEKDG-KAKTISSEQESLEQVY 445