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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913057
Clone id YMU001_000026_A03
Library
Length 499
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000026_A03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CCTAGAGAACGGGTTCGGTGGGTATCACATATTTCGAGAGAATTGCGAGGATTTTGCAAT
GTATTGCAAGACAGGGCTTCTTATAGTGGACGGCAATTCAATTGGGACGAGCGGGCAAGC
AAGTTCTTTTCTTGGGGCTCCGTTGGCAGCGGTAGCGTCTTCTCCTCTCAGATTTATCAT
GGCAGAGCCATGGGGGCTGGTTGCGGTGAGCGCAAGTATGTATTGCTTGAGTAGGTATGT
TGCAGATTTGGGCAACCGCAGGGATGTTACAAAAGTAGCTGTGGAGGATTTGGTTGCACA
AGTTATTCCCGAAGCTCTTGTCACTCCGCTAAGGATTGAAGAGATGGAGAGGAAAGAAAA
GTAATTTCTCAACTGATTATTTATACATTGTTAAATTTCACTTAACATTGGTGGTAGCTT
CTTGTACATACTAATTATGTCTTAGAGGGGATTTTCTGCTTGGCAACATCAAACTTTGTT
TACATTTTTCTCCATATAG
■■Homology search results ■■ -
sp_hit_id O43521
Definition sp|O43521|BIM_HUMAN Bcl-2-like protein 11 OS=Homo sapiens
Align length 57
Score (bit) 32.3
E-value 1.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913057|Adiantum capillus-veneris mRNA, clone:
YMU001_000026_A03.
         (499 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O43521|BIM_HUMAN Bcl-2-like protein 11 OS=Homo sapiens GN=BCL...    32   1.3  
sp|Q5TGY1|TMCO4_HUMAN Transmembrane and coiled-coil domain-conta...    31   3.7  
sp|Q9AKK7|HLP_RICMO Histone-like DNA-binding protein OS=Ricketts...    30   6.3  
sp|Q92GN5|HLP_RICCN Histone-like DNA-binding protein OS=Ricketts...    30   6.3  
sp|Q17QP1|ABHD8_BOVIN Abhydrolase domain-containing protein 8 OS...    30   8.0  
sp|Q54BW5|DUT_DICDI Deoxyuridine 5'-triphosphate nucleotidohydro...    30   8.2  

>sp|O43521|BIM_HUMAN Bcl-2-like protein 11 OS=Homo sapiens
           GN=BCL2L11 PE=1 SV=1
          Length = 198

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 20/57 (35%), Positives = 30/57 (52%)
 Frame = -2

Query: 201 TSPHGSAMINLRGEDATAANGAPRKELACPLVPIELPSTIRSPVLQYIAKSSQFSRN 31
           T P G+   N  GE  +  +G+P+  LA P  P   P   RSP+  ++ +SS  SR+
Sbjct: 38  TEPQGNPEGNHGGEGDSCPHGSPQGPLAPPASP--GPFATRSPLFIFMRRSSLLSRS 92


>sp|Q5TGY1|TMCO4_HUMAN Transmembrane and coiled-coil
           domain-containing protein 4 OS=Homo sapiens GN=TMCO4
           PE=2 SV=1
          Length = 634

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = +2

Query: 107 TSGQASSFLGAPLAAVASSPLRFIMAEPWGLVAVSASMYCL---SRYVADLGNRRDVTKV 277
           T G+      A    +AS   R   A PW  +A S   YCL   ++Y+ +LGN  +    
Sbjct: 272 TEGRQLHITIAVTGWLASGKYRTFSA-PWAALAHSREQYCLAWEAKYLMELGNALETILS 330

Query: 278 AVEDLVAQ 301
            + ++VAQ
Sbjct: 331 GLANMVAQ 338


>sp|Q9AKK7|HLP_RICMO Histone-like DNA-binding protein OS=Rickettsia
           montana PE=3 SV=1
          Length = 95

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -1

Query: 325 SDKSFGNNLCNQILHSYFCNIPAVAQ 248
           S   F NNLC +I+H+ F NI  +A+
Sbjct: 14  SKLGFSNNLCEEIVHTVFSNILEIAK 39


>sp|Q92GN5|HLP_RICCN Histone-like DNA-binding protein OS=Rickettsia
           conorii GN=RC1088 PE=3 SV=1
          Length = 95

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -1

Query: 325 SDKSFGNNLCNQILHSYFCNIPAVAQ 248
           S   F NNLC +I+H+ F NI  +A+
Sbjct: 14  SKLGFSNNLCEEIVHTVFSNILEIAK 39


>sp|Q17QP1|ABHD8_BOVIN Abhydrolase domain-containing protein 8
           OS=Bos taurus GN=ABHD8 PE=2 SV=1
          Length = 432

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = -3

Query: 254 CPNLQHTYSSNTYLRSPQPAPMALP**I*EEKTLPLPTEPQEK 126
           CP   +T      L  P+P+P ALP         PLP  P+EK
Sbjct: 397 CPETVNTLLHEFLLWEPEPSPKALP--------EPLPAPPEEK 431


>sp|Q54BW5|DUT_DICDI Deoxyuridine 5'-triphosphate
           nucleotidohydrolase OS=Dictyostelium discoideum GN=dut
           PE=3 SV=1
          Length = 179

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
 Frame = +2

Query: 248 LGNRRDVT-KVAVEDLVAQVIPEALVT--PLRIEEMERKEK 361
           L N  DV  KVAV D VAQ+I E +VT  PL ++E++  ++
Sbjct: 125 LFNHSDVDFKVAVGDRVAQLIFERIVTPEPLEVDEIDETQR 165
tr_hit_id A9S4C5
Definition tr|A9S4C5|A9S4C5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 101
Score (bit) 144.0
E-value 2.0e-33
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913057|Adiantum capillus-veneris mRNA, clone:
YMU001_000026_A03.
         (499 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9S4C5|A9S4C5_PHYPA Predicted protein OS=Physcomitrella paten...   144   2e-33
tr|A9NKJ8|A9NKJ8_PICSI Putative uncharacterized protein OS=Picea...   142   1e-32
tr|A5AP48|A5AP48_VITVI Putative uncharacterized protein (Chromos...   136   5e-31
tr|Q3EAE0|Q3EAE0_ARATH Uncharacterized protein At4g00905.1 OS=Ar...   135   1e-30
tr|Q29PY0|Q29PY0_ARATH At1g01225 OS=Arabidopsis thaliana PE=2 SV=1    131   2e-29
tr|Q8LBP8|Q8LBP8_ARATH Putative uncharacterized protein OS=Arabi...   130   3e-29
tr|A7QHR8|A7QHR8_VITVI Chromosome chr8 scaffold_99, whole genome...   126   6e-28
tr|Q652A7|Q652A7_ORYSJ Os09g0526800 protein OS=Oryza sativa subs...   125   8e-28
tr|B8BDM4|B8BDM4_ORYSI Putative uncharacterized protein OS=Oryza...   125   8e-28
tr|B7EKF8|B7EKF8_ORYSJ cDNA clone:J013135P13, full insert sequen...   125   8e-28
tr|A9P901|A9P901_POPTR Putative uncharacterized protein OS=Popul...   125   8e-28
tr|A7PTM4|A7PTM4_VITVI Chromosome undetermined scaffold_30, whol...   125   8e-28
tr|A5BRU2|A5BRU2_VITVI Putative uncharacterized protein (Fragmen...   125   8e-28
tr|A6MD14|A6MD14_9ORYZ NC domain-containing protein OS=Oryza bra...   124   2e-27
tr|B7ZZ58|B7ZZ58_MAIZE Putative uncharacterized protein OS=Zea m...   124   3e-27
tr|Q6Z9C5|Q6Z9C5_ORYSJ Putative uncharacterized protein P0544G09...   123   5e-27
tr|Q0J3X7|Q0J3X7_ORYSJ Os08g0546900 protein OS=Oryza sativa subs...   123   5e-27
tr|A2YXS3|A2YXS3_ORYSI Putative uncharacterized protein OS=Oryza...   123   5e-27
tr|Q60DG8|Q60DG8_ORYSJ Putative uncharacterized protein B1110B01...   122   9e-27
tr|B7ETM3|B7ETM3_ORYSJ (RAP Annotation release2) Histone deacety...   122   9e-27
tr|A3B4G1|A3B4G1_ORYSJ Putative uncharacterized protein OS=Oryza...   122   9e-27
tr|A2Y542|A2Y542_ORYSI Putative uncharacterized protein OS=Oryza...   122   9e-27
tr|B4FDL9|B4FDL9_MAIZE Putative uncharacterized protein OS=Zea m...   122   1e-26
tr|Q9FNH1|Q9FNH1_ARATH Gb|AAF32477.1 OS=Arabidopsis thaliana PE=...   119   1e-25
tr|Q93V51|Q93V51_ARATH AT5g06370/MHF15_11 (Putative uncharacteri...   119   1e-25
tr|B4FXL3|B4FXL3_MAIZE Putative uncharacterized protein OS=Zea m...   118   1e-25
tr|B4F8I3|B4F8I3_MAIZE Putative uncharacterized protein OS=Zea m...   118   1e-25
tr|Q0DJA1|Q0DJA1_ORYSJ Os05g0310600 protein OS=Oryza sativa subs...   115   9e-25
tr|A2Y317|A2Y317_ORYSI Putative uncharacterized protein OS=Oryza...   115   9e-25
tr|Q9M872|Q9M872_ARATH F16B3.33 protein (At3g02700) (Putative un...   102   1e-20

>tr|A9S4C5|A9S4C5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_181133 PE=4 SV=1
          Length = 272

 Score =  144 bits (363), Expect = 2e-33
 Identities = 65/101 (64%), Positives = 78/101 (77%)
 Frame = +2

Query: 2   LENGFGGYHIFRENCEDFAMYCKTGLLIVDGNSIGTSGQASSFLGAPLAAVASSPLRFIM 181
           L NGFG YHIF  NCEDFA+YCKTGLL+++ N IG SGQA+S +GAP AAV SSPL+F+M
Sbjct: 139 LNNGFGLYHIFHNNCEDFAIYCKTGLLVIERNMIGRSGQAASVIGAPFAAVVSSPLKFMM 198

Query: 182 AEPWGLVAVSASMYCLSRYVADLGNRRDVTKVAVEDLVAQV 304
             PWG  AV+A +YC SRY  D+G R+DV KVAVEDL   +
Sbjct: 199 TSPWGFAAVTAGVYCFSRYATDIGVRQDVAKVAVEDLATNM 239


>tr|A9NKJ8|A9NKJ8_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 241

 Score =  142 bits (357), Expect = 1e-32
 Identities = 69/109 (63%), Positives = 84/109 (77%), Gaps = 6/109 (5%)
 Frame = +2

Query: 2   LENGFGGYHIFRENCEDFAMYCKTGLLIVDGNSIGTSGQASSFLGAPLAAVASSPLRFIM 181
           LENGFG Y+IF+ NCEDFA+YCKTGLL++D N IG SGQA+S LGAP AA+ SSPLRF+ 
Sbjct: 128 LENGFGCYNIFKNNCEDFAIYCKTGLLVIDRNPIGRSGQAASILGAPFAAIFSSPLRFLT 187

Query: 182 AEPWGLVAVSASMYCLSRYVADLGNRRDVTKVAVEDLV------AQVIP 310
            +  G+  V+  MYCLSRY AD+G RRDV+K+AV+DL       AQVIP
Sbjct: 188 TDITGMTVVAIGMYCLSRYAADIGVRRDVSKIAVDDLTVKLGLNAQVIP 236


>tr|A5AP48|A5AP48_VITVI Putative uncharacterized protein (Chromosome
           undetermined scaffold_203, whole genome shotgun
           sequence) OS=Vitis vinifera GN=GSVIVT00008650001 PE=4
           SV=1
          Length = 262

 Score =  136 bits (343), Expect = 5e-31
 Identities = 62/101 (61%), Positives = 78/101 (77%)
 Frame = +2

Query: 2   LENGFGGYHIFRENCEDFAMYCKTGLLIVDGNSIGTSGQASSFLGAPLAAVASSPLRFIM 181
           L+NGFG Y +F+ NCEDFA+YCKTGLLIVD + +G SGQASS +GAPLAA+ SSPL+ +M
Sbjct: 139 LQNGFGNYDVFQNNCEDFALYCKTGLLIVDKSGVGRSGQASSVIGAPLAAILSSPLKLLM 198

Query: 182 AEPWGLVAVSASMYCLSRYVADLGNRRDVTKVAVEDLVAQV 304
             P G+  V+A MYC+SRY  D+G R DV KVAVE+L   +
Sbjct: 199 PSPVGVATVTAGMYCMSRYATDIGVRTDVIKVAVEELAVNL 239


>tr|Q3EAE0|Q3EAE0_ARATH Uncharacterized protein At4g00905.1
           OS=Arabidopsis thaliana GN=At4g00905 PE=4 SV=1
          Length = 263

 Score =  135 bits (339), Expect = 1e-30
 Identities = 65/120 (54%), Positives = 84/120 (70%)
 Frame = +2

Query: 2   LENGFGGYHIFRENCEDFAMYCKTGLLIVDGNSIGTSGQASSFLGAPLAAVASSPLRFIM 181
           L+NGFG Y++F+ NCEDFA+YCKTGLLI+D N +G SGQASS +GAPLAA+ SSPL  ++
Sbjct: 145 LQNGFGNYNVFQNNCEDFALYCKTGLLILDKNGVGRSGQASSIIGAPLAALLSSPLTLLI 204

Query: 182 AEPWGLVAVSASMYCLSRYVADLGNRRDVTKVAVEDLVAQVIPEALVTPLRIEEMERKEK 361
             P G+  V+A MYC+SRY  D+G R DV KV VEDL            L ++ ++RK K
Sbjct: 205 PNPVGVATVTAGMYCMSRYATDIGVRNDVIKVPVEDLALN---------LGLKPLKRKRK 255


>tr|Q29PY0|Q29PY0_ARATH At1g01225 OS=Arabidopsis thaliana PE=2 SV=1
          Length = 260

 Score =  131 bits (330), Expect = 2e-29
 Identities = 63/119 (52%), Positives = 83/119 (69%)
 Frame = +2

Query: 2   LENGFGGYHIFRENCEDFAMYCKTGLLIVDGNSIGTSGQASSFLGAPLAAVASSPLRFIM 181
           L+NGFG Y IF+ NCEDFA+YCKTGLLI+D   +G SGQASS +GAPLAA+ SSP + ++
Sbjct: 135 LQNGFGNYDIFKNNCEDFALYCKTGLLIMDKLGVGRSGQASSIVGAPLAALLSSPFKLLI 194

Query: 182 AEPWGLVAVSASMYCLSRYVADLGNRRDVTKVAVEDLVAQVIPEALVTPLRIEEMERKE 358
             P G+  V+A MYC+SRY  D+G R DV KV+VEDL   +  + +      EE E ++
Sbjct: 195 PSPIGVATVTAGMYCMSRYATDIGVRSDVIKVSVEDLALNLDVKTIEQGEEEEEDEEED 253


>tr|Q8LBP8|Q8LBP8_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 260

 Score =  130 bits (328), Expect = 3e-29
 Identities = 63/119 (52%), Positives = 83/119 (69%)
 Frame = +2

Query: 2   LENGFGGYHIFRENCEDFAMYCKTGLLIVDGNSIGTSGQASSFLGAPLAAVASSPLRFIM 181
           L+NGFG Y IF+ NCEDFA+YCKTGLLI+D   +G SGQASS +GAPLAA+ SSP + ++
Sbjct: 135 LQNGFGNYDIFKNNCEDFALYCKTGLLIMDKLGVGRSGQASSIVGAPLAALLSSPSKLLI 194

Query: 182 AEPWGLVAVSASMYCLSRYVADLGNRRDVTKVAVEDLVAQVIPEALVTPLRIEEMERKE 358
             P G+  V+A MYC+SRY  D+G R DV KV+VEDL   +  + +      EE E ++
Sbjct: 195 PSPIGVATVTAGMYCMSRYATDIGVRSDVIKVSVEDLALNLDVKTIEQGEEEEEDEEED 253


>tr|A7QHR8|A7QHR8_VITVI Chromosome chr8 scaffold_99, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00038896001
           PE=4 SV=1
          Length = 262

 Score =  126 bits (316), Expect = 6e-28
 Identities = 56/101 (55%), Positives = 75/101 (74%)
 Frame = +2

Query: 2   LENGFGGYHIFRENCEDFAMYCKTGLLIVDGNSIGTSGQASSFLGAPLAAVASSPLRFIM 181
           L NGFG Y++F+ NCEDFA+YCKTGLL++D  +IG SGQA S +G PLAAV S+PLR + 
Sbjct: 139 LNNGFGCYNVFKNNCEDFAIYCKTGLLVIDQGTIGRSGQAVSIIGGPLAAVLSTPLRLVT 198

Query: 182 AEPWGLVAVSASMYCLSRYVADLGNRRDVTKVAVEDLVAQV 304
              +G+ A +  +YC SR+ AD+G R+DV KV VEDL  ++
Sbjct: 199 TNIYGMAATAVGVYCASRFAADIGMRKDVAKVEVEDLTRRL 239


>tr|Q652A7|Q652A7_ORYSJ Os09g0526800 protein OS=Oryza sativa subsp.
           japonica GN=OJ1439_F07.19-1 PE=2 SV=1
          Length = 268

 Score =  125 bits (315), Expect = 8e-28
 Identities = 58/97 (59%), Positives = 72/97 (74%)
 Frame = +2

Query: 2   LENGFGGYHIFRENCEDFAMYCKTGLLIVDGNSIGTSGQASSFLGAPLAAVASSPLRFIM 181
           L+NGFG Y IF  NCEDFA+YCKTGLL V+   IGTSGQASS +G PLAA+ S+PL+   
Sbjct: 138 LQNGFGNYDIFENNCEDFALYCKTGLLPVEEPGIGTSGQASSAIGVPLAALLSTPLKLFA 197

Query: 182 AEPWGLVAVSASMYCLSRYVADLGNRRDVTKVAVEDL 292
           A P G+  V+A MYC  RY+ D+G R+DV K+ VE+L
Sbjct: 198 AGPLGMATVTAGMYCAGRYITDIGVRKDVAKIEVENL 234


>tr|B8BDM4|B8BDM4_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_32111 PE=4 SV=1
          Length = 268

 Score =  125 bits (315), Expect = 8e-28
 Identities = 58/97 (59%), Positives = 72/97 (74%)
 Frame = +2

Query: 2   LENGFGGYHIFRENCEDFAMYCKTGLLIVDGNSIGTSGQASSFLGAPLAAVASSPLRFIM 181
           L+NGFG Y IF  NCEDFA+YCKTGLL V+   IGTSGQASS +G PLAA+ S+PL+   
Sbjct: 138 LQNGFGNYDIFENNCEDFALYCKTGLLPVEEPGIGTSGQASSAIGVPLAALLSTPLKLFA 197

Query: 182 AEPWGLVAVSASMYCLSRYVADLGNRRDVTKVAVEDL 292
           A P G+  V+A MYC  RY+ D+G R+DV K+ VE+L
Sbjct: 198 AGPLGMATVTAGMYCAGRYITDIGVRKDVAKIEVENL 234


>tr|B7EKF8|B7EKF8_ORYSJ cDNA clone:J013135P13, full insert sequence
           OS=Oryza sativa subsp. japonica PE=2 SV=1
          Length = 243

 Score =  125 bits (315), Expect = 8e-28
 Identities = 58/97 (59%), Positives = 72/97 (74%)
 Frame = +2

Query: 2   LENGFGGYHIFRENCEDFAMYCKTGLLIVDGNSIGTSGQASSFLGAPLAAVASSPLRFIM 181
           L+NGFG Y IF  NCEDFA+YCKTGLL V+   IGTSGQASS +G PLAA+ S+PL+   
Sbjct: 113 LQNGFGNYDIFENNCEDFALYCKTGLLPVEEPGIGTSGQASSAIGVPLAALLSTPLKLFA 172

Query: 182 AEPWGLVAVSASMYCLSRYVADLGNRRDVTKVAVEDL 292
           A P G+  V+A MYC  RY+ D+G R+DV K+ VE+L
Sbjct: 173 AGPLGMATVTAGMYCAGRYITDIGVRKDVAKIEVENL 209