BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913060|Adiantum capillus-veneris mRNA, clone:
YMU001_000026_A08.
         (451 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5FLW6|SYA_LACAC Alanyl-tRNA synthetase OS=Lactobacillus acid...    31   2.1  
sp|Q6ZRU5|YQ032_HUMAN Putative uncharacterized protein FLJ46089 ...    31   2.8  
sp|P77296|YBET_ECOLI Uncharacterized protein ybeT OS=Escherichia...    30   4.8  
sp|Q4JAB1|RFCL_SULAC Replication factor C large subunit OS=Sulfo...    30   4.8  
sp|Q8TSA6|PYRC_METAC Dihydroorotase OS=Methanosarcina acetivoran...    29   8.0  
sp|P0A3Y5|KKA3_ENTFA Aminoglycoside 3'-phosphotransferase OS=Ent...    29   8.2  

>sp|Q5FLW6|SYA_LACAC Alanyl-tRNA synthetase OS=Lactobacillus
           acidophilus GN=alaS PE=3 SV=1
          Length = 879

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = +3

Query: 264 LPTESLVCLAYPKDRIS*NVW 326
           LP E L C  YPKD  S NVW
Sbjct: 120 LPKEKLYCTVYPKDEDSFNVW 140


>sp|Q6ZRU5|YQ032_HUMAN Putative uncharacterized protein FLJ46089
           OS=Homo sapiens PE=2 SV=2
          Length = 148

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -3

Query: 209 LCKKYQTRCGTHRICCWCSW 150
           +CK+  TR GT+ + CWCSW
Sbjct: 29  VCKQVCTRVGTYAV-CWCSW 47


>sp|P77296|YBET_ECOLI Uncharacterized protein ybeT OS=Escherichia
           coli (strain K12) GN=ybeT PE=4 SV=1
          Length = 184

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
 Frame = -1

Query: 217 LLFCVRSIKQGVAHTEYVVGV---PGSPLAYHDFDKLLWILMSFPQHHK 80
           +L+   + +QG AH +Y +G+    GS +  + ++   W+ ++  QH+K
Sbjct: 124 ILWYKEAAEQGYAHAQYTLGLIYRNGSGINVNHYESQKWLKLTAKQHYK 172


>sp|Q4JAB1|RFCL_SULAC Replication factor C large subunit
           OS=Sulfolobus acidocaldarius GN=rfcL PE=3 SV=1
          Length = 437

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 6/73 (8%)
 Frame = -1

Query: 238 YRTNSYDLLFCVRSIKQGVAHTEYVVGVPGSPLAYHDFDK------LLWILMSFPQHHKA 77
           Y   S   +F  R+ + G     YV  + G  +A+   +K        W+   FPQ+ +A
Sbjct: 285 YEALSRASVFLTRAKQVGWDLLSYVFDLMGPGIAFASLEKKKPGYKARWVKYQFPQYIQA 344

Query: 76  LASASETRSLLST 38
           LA   E R  + T
Sbjct: 345 LARTKEKRDSIET 357


>sp|Q8TSA6|PYRC_METAC Dihydroorotase OS=Methanosarcina acetivorans
           GN=pyrC PE=3 SV=1
          Length = 467

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
 Frame = +3

Query: 36  QVESKDLVSDAEAKALWCCGKDINIH-----KSLSKSWY----ASGLPGTPTTYSVCATP 188
           +V S D+V DAE       G D+++H      +L ++WY    A+   G  T   V   P
Sbjct: 37  RVSSSDMVIDAEGALTLPAGIDVHVHFREPGMTLKENWYTGSCAAAAGGIAT---VIDQP 93

Query: 189 CLILLTQNSRS*EFVLYSGRKRCTV 263
             I  T + RS E  L   RK+  V
Sbjct: 94  NTIPPTTDRRSFEQKLKLARKKSIV 118


>sp|P0A3Y5|KKA3_ENTFA Aminoglycoside 3'-phosphotransferase
           OS=Enterococcus faecalis GN=aphA PE=1 SV=1
          Length = 264

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -1

Query: 223 YDLLFCVRSIKQGVAHTEYV 164
           YD+ FCVRSI++ +   +YV
Sbjct: 219 YDIAFCVRSIREDIGEEQYV 238

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913060|Adiantum capillus-veneris mRNA, clone:
YMU001_000026_A08.
         (451 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5G644|A5G644_GEOUR Beta-ketoacyl synthase OS=Geobacter urani...    33   9.3  
tr|Q23Q30|Q23Q30_TETTH Putative uncharacterized protein OS=Tetra...    33   9.3  

>tr|A5G644|A5G644_GEOUR Beta-ketoacyl synthase OS=Geobacter
           uraniireducens (strain Rf4) GN=Gura_3097 PE=4 SV=1
          Length = 4869

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
 Frame = -1

Query: 307 LSFGYARHTKLSVGNTVHL--LRPEYRTNSYDLLFC-VRSIKQGVAHTEYVVGVPGSPLA 137
           +S+  A  T  S+G+ + +  L   YR  + D  +C + S+K  + H E   G+ G    
Sbjct: 727 ISYVEAHGTGTSLGDPIEIQGLARAYRIYTQDQQYCSIGSVKSNIGHAESAAGISG---- 782

Query: 136 YHDFDKLLWILMSFPQHHKALASASETRSLLSTCDHSAS 20
                KLL  L     HHK L  +     L S  D   S
Sbjct: 783 ---LHKLLLQL-----HHKVLVPSLHAEELNSYIDFKKS 813


>tr|Q23Q30|Q23Q30_TETTH Putative uncharacterized protein
           OS=Tetrahymena thermophila SB210 GN=TTHERM_00460540 PE=4
           SV=1
          Length = 402

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 14/57 (24%), Positives = 31/57 (54%)
 Frame = +2

Query: 218 IIGVCPVLRSQEVHRVAN*KFSVPSIPEG*DFLECLVWIVREVSKLCISHFGNCLVV 388
           +I  C +L+ + +H +   K +  ++ E   F+E ++W  R ++  C+  F N +V+
Sbjct: 82  VIRCCDILKDRSMH-ICESKGNPAAVKELLPFIETIIWSTRHLNLSCLQEFTNMMVM 137