BP913080 |
Clone id |
YMU001_000026_C07 |
Library |
YMU01 |
Length |
555 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000026_C07. |
Accession |
BP913080 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2311Contig1 |
Sequence |
CTTGCCAACATTACAAGCGCCTTTCATGTAAACCAATGCCTTGTATGGGTCAAAACGTGC ACAGTAGCTGATGAATACAAATACTCAATTGCTTCAACATCAATCGCAACACATCCCTAC TCTCACACTTTACAGCAAAGGTGTTTCATTCCAACCTGAAAGATACTACCCCTCAAACTT GATTTACGATCAAGGGATACAGTTTTTGTGCCCTTGTCGATGATGCAACCTCCTCTATAG TAGAGTTTTTGAAAGAAGTTACATATTCTTTGGTTAGAAAACCATTTGCAATTACCTCAG CAAAGGATTCTACTGGATGCATAGTATCCCAAAAGATATAGGATGATGGATCATCACATT TCCATGCTCCGGTGAATACACCACCAACGTATCCACTCCTACCACAGAGAATGCTTGCAT TGAAGTTATAATCCCCTCCTCCTGCTCCACAGCATGCTCGTCGGGTGTACTTGATACCAC AAGTTTCCGGGTGGTGTATGGCATCTTTGAAGATAGAGTTGACATCAAACAACGACCAAT TGGCCAAAGGTAACT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q93YW8 |
Definition |
sp|Q93YW8|Y4897_ARATH Uncharacterized GDSL lipase family protein At4g18970 OS=Arabidopsis thaliana |
Align length |
109 |
Score (bit) |
48.9 |
E-value |
2.0e-05 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913080|Adiantum capillus-veneris mRNA, clone: YMU001_000026_C07. (555 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q93YW8|Y4897_ARATH Uncharacterized GDSL lipase family protein... 49 2e-05 sp|Q9FXE5|FUCO3_ARATH Alpha-L-fucosidase 3 OS=Arabidopsis thalia... 47 5e-05 sp|P40602|APG_ARATH Anter-specific proline-rich protein APG OS=A... 47 6e-05 sp|Q7Y1X1|EST_HEVBR Esterase OS=Hevea brasiliensis PE=1 SV=1 44 7e-04 sp|P40603|APG_BRANA Anther-specific proline-rich protein APG (Fr... 40 0.006 sp|O60064|YBB2_SCHPO Probable mannose-1-phosphate guanyltransfer... 34 0.42 sp|Q21SF8|RPOC_RHOFD DNA-directed RNA polymerase subunit beta' O... 33 0.72 sp|P29760|AMYI_YEAST Glucoamylase S2 OS=Saccharomyces cerevisiae... 31 3.5 sp|P04065|AMYH_YEAST Glucoamylase S1 OS=Saccharomyces cerevisiae... 31 3.5 sp|Q5DTT3|CJ018_MOUSE Uncharacterized protein C10orf18 homolog O... 31 4.6 sp|Q99289|HLT_VIBPA Thermolabile hemolysin OS=Vibrio parahaemoly... 30 6.0 sp|A6QR00|ZN526_BOVIN Zinc finger protein 526 OS=Bos taurus GN=Z... 30 7.9 sp|Q6JHU7|P3H2_CHICK Prolyl 3-hydroxylase 2 OS=Gallus gallus GN=... 30 7.9 sp|Q746Q2|OXAA_GEOSL Inner membrane protein oxaA OS=Geobacter su... 30 7.9 sp|P44551|MNMA_HAEIN tRNA-specific 2-thiouridylase mnmA OS=Haemo... 30 7.9 sp|Q4QP16|MNMA_HAEI8 tRNA-specific 2-thiouridylase mnmA OS=Haemo... 30 7.9
>sp|Q93YW8|Y4897_ARATH Uncharacterized GDSL lipase family protein At4g18970 OS=Arabidopsis thaliana GN=At4g18970 PE=2 SV=1 Length = 361
Score = 48.9 bits (115), Expect = 2e-05 Identities = 29/109 (26%), Positives = 45/109 (41%) Frame = -3
Query: 550 PLANWSLFDVNSIFKDAIHHPETCGIKYTRRACCGAGGGDYNFNASILCGRSGYVGGVFT 371 P A ++ + IF+D + +P G + T CCG G N I C Sbjct: 264 PGAKFTYINAYGIFQDMVANPSRYGFRVTNAGCCGVGRN----NGQITC---------LP 310
Query: 370 GAWKCDDPSSYIFWDTMHPVESFAEVIANGFLTKEYVTSFKNSTIEEVA 224 G C + Y+FWD HP E+ VI + +E + I+++A Sbjct: 311 GQAPCLNRDEYVFWDAFHPGEAANVVIGSRSFQRESASDAHPYDIQQLA 359
>sp|Q9FXE5|FUCO3_ARATH Alpha-L-fucosidase 3 OS=Arabidopsis thaliana GN=FXG1 PE=2 SV=1 Length = 372
Score = 47.4 bits (111), Expect = 5e-05 Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 2/72 (2%) Frame = -3
Query: 526 DVNSIFKDAIHHPETCGIKYTRRACCGAGGGDYNFNASILCGRSGYVGG--VFTGAWKCD 353 DV S+ + H + G K + +CCG GG YN+N I CG V G V+ G CD Sbjct: 279 DVYSLKHELFVHAQGHGFKGSLVSCCGHGG-KYNYNKGIGCGMKKIVKGKEVYIGK-PCD 336
Query: 352 DPSSYIFWDTMH 317 +P + WD +H Sbjct: 337 EPDKAVVWDGVH 348
>sp|P40602|APG_ARATH Anter-specific proline-rich protein APG OS=Arabidopsis thaliana GN=APG PE=2 SV=2 Length = 534
Score = 47.0 bits (110), Expect = 6e-05 Identities = 29/98 (29%), Positives = 46/98 (46%) Frame = -3
Query: 553 LPLANWSLFDVNSIFKDAIHHPETCGIKYTRRACCGAGGGDYNFNASILCGRSGYVGGVF 374 LP + + D+ +I + P G + T++ CC G +A LC +S Sbjct: 445 LPNSTFVYMDIYTIISQMLETPAAYGFEETKKPCCKTG----LLSAGALCKKST------ 494
Query: 373 TGAWKCDDPSSYIFWDTMHPVESFAEVIANGFLTKEYV 260 + C + SSY+FWD +HP + + I N L KEY+ Sbjct: 495 --SKICPNTSSYLFWDGVHPTQRAYKTI-NKVLIKEYL 529
>sp|Q7Y1X1|EST_HEVBR Esterase OS=Hevea brasiliensis PE=1 SV=1 Length = 391
Score = 43.5 bits (101), Expect = 7e-04 Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 1/87 (1%) Frame = -3
Query: 553 LPLANWSLFDVNSIFKDAIHHPETCGIKYTRRACCGAGGGDYNFNASILCGRSGYV-GGV 377 LPLA + D+ S+ PE G ++ CCG GG YNF+ + CG + G Sbjct: 272 LPLATFVHVDIYSVKYSLFSEPEKHGFEFPLITCCGY-GGKYNFSVTAPCGDTVTADDGT 330
Query: 376 FTGAWKCDDPSSYIFWDTMHPVESFAE 296 C PS + WD H E+ E Sbjct: 331 KIVVGSCACPSVRVNWDGAHYTEAANE 357
>sp|P40603|APG_BRANA Anther-specific proline-rich protein APG (Fragment) OS=Brassica napus GN=APG PE=2 SV=1 Length = 449
Score = 40.4 bits (93), Expect = 0.006 Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 3/92 (3%) Frame = -3
Query: 526 DVNSIFKDAIHHPETCGIKYTRRACCGAGGGDYNFNASILCGRSGYVGGVFTGAW---KC 356 D+ SIF + PE G + ++ CC G GGVF Sbjct: 371 DIYSIFSKMLESPEDYGFEEIKKPCCKIGLTK---------------GGVFCKERTLKNM 415
Query: 355 DDPSSYIFWDTMHPVESFAEVIANGFLTKEYV 260 + SSY+FWD +HP + E I+N L K+Y+ Sbjct: 416 SNASSYLFWDGLHPSQRAYE-ISNRKLVKKYI 446
>sp|O60064|YBB2_SCHPO Probable mannose-1-phosphate guanyltransferase OS=Schizosaccharomyces pombe GN=SPBC13G1.02 PE=2 SV=1 Length = 414
Score = 34.3 bits (77), Expect = 0.42 Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 6/50 (12%) Frame = -3
Query: 517 SIFKDAI-----HHPETCGIKYTRRA-CCGAGGGDYNFNASILCGRSGYV 386 S+FKD I H P IKY R C G GGG Y+F IL G + V Sbjct: 63 SVFKDFINEVASHFPSFNRIKYLREYNCLGTGGGLYHFRDQILKGHTSNV 112
>sp|Q21SF8|RPOC_RHOFD DNA-directed RNA polymerase subunit beta' OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=rpoC PE=3 SV=1 Length = 1405
Score = 33.5 bits (75), Expect = 0.72 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Frame = -1
Query: 492 TRKLVVSSTPDEHAVEQEEGIITSMQAFSVVGVDTLVVYSPEH-GNVMIHHPI 337 TR ++ H EEG+ + Q V G+ T+VV P+H G+ + PI Sbjct: 1024 TRPIITEFAGKAHFENVEEGLTVAKQVDEVTGLSTMVVIDPKHRGSAKVIRPI 1076
>sp|P29760|AMYI_YEAST Glucoamylase S2 OS=Saccharomyces cerevisiae GN=STA2 PE=3 SV=1 Length = 768
Score = 31.2 bits (69), Expect = 3.5 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%) Frame = +2
Query: 356 TFPCS---GEYTTNVSTPTTENACIEVIIPSSCSTACSSGVLDTTSF 487 T PCS GEYTT + P T A ++ + ST +S TTS+ Sbjct: 235 TVPCSTGTGEYTTEATAPVT-TAVTTTVVTTESSTGTNSAGKTTTSY 280
>sp|P04065|AMYH_YEAST Glucoamylase S1 OS=Saccharomyces cerevisiae GN=STA1 PE=3 SV=2 Length = 767
Score = 31.2 bits (69), Expect = 3.5 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%) Frame = +2
Query: 356 TFPCS---GEYTTNVSTPTTENACIEVIIPSSCSTACSSGVLDTTSF 487 T PCS GEYTT + P T A ++ + ST +S TTS+ Sbjct: 234 TVPCSTGTGEYTTEATAPVT-TAVTTTVVTTESSTGTNSAGKTTTSY 279
>sp|Q5DTT3|CJ018_MOUSE Uncharacterized protein C10orf18 homolog OS=Mus musculus GN=Kiaa2006 PE=2 SV=2 Length = 2382
Score = 30.8 bits (68), Expect = 4.6 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = +2
Query: 302 KGFYWMHSIPKDIG*WIITFPCSGEYTTNVSTPTTENACIEVII 433 K F+ H++ K G + ITF C GEY ++ + T N + ++ Sbjct: 721 KEFFCSHTVLKCDGSFKITFKCEGEYVFSLDSKYTSNPLEKTVL 764
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PZR2 |
Definition |
tr|A7PZR2|A7PZR2_VITVI Chromosome chr15 scaffold_40, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
97 |
Score (bit) |
80.1 |
E-value |
7.0e-14 |
Report |
|