BP913084
Clone id YMU001_000026_C11
Library
Length 584
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000026_C11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CATTGCTATCTGTTGCATCTCCCATACTTGTTCTAGTGTTGTGCCCCATGCTGCTCTGAG
TTTTTCAATGGCAGCAGCTATCAAGAATTGTTGATCATTTGGCGGTAGGATCAGCACATC
TTGTTCCCTTTTGAGTAGATTATTTTCTTGCTCTAGCACTCCTGCTTTGGCTATGGTCTG
AAGCATTGCATCCTGAAGCTTCGCATGATTATCCTTCCATACCCCCAAAGCTCCATCTCT
CAGGCTTATAGCCTTCAGGTCATCGAAGCATTGTTTCCTCAGTTTCTCGTGCTGCTATTC
CATCCTTTGCATTCTTTCCTCCACTTCTTGAGCCGTTTTCTCTTTTTCTGCTTTCACCTC
TTCAATTTGTTTGAGAGCCGGAGTCATACTCTGGTCCATATTTTTGATAGTATGAGCAGA
GGCTTTCTTTTCAGTGCCATGTCCTTTAACGTCTGCAGATTTTCGACTCTAGTGTGCCTC
AAGGCTCTATTCTCTTCCTCTAGTTTGTATTTGACCTCTTTTGTTCATATCAGCTCCATC
TTGTCTTTCAACATGCTCTGCTACCACTGCATGGTTTCTTTGCC
■■Homology search results ■■ -
sp_hit_id Q60289
Definition sp|Q60289|Y3532_METJA Uncharacterized protein MJECL32 OS=Methanocaldococcus jannaschii
Align length 40
Score (bit) 30.8
E-value 5.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913084|Adiantum capillus-veneris mRNA, clone:
YMU001_000026_C11.
(584 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q60289|Y3532_METJA Uncharacterized protein MJECL32 OS=Methano... 31 5.2
sp|Q6QUW1|RGP51_LYMST Retrograde protein of 51 kDa OS=Lymnaea st... 30 6.7
sp|P10587|MYH11_CHICK Myosin-11 OS=Gallus gallus GN=MYH11 PE=1 SV=4 30 8.8
sp|Q73I07|DCD_WOLPM Deoxycytidine triphosphate deaminase OS=Wolb... 30 8.8

>sp|Q60289|Y3532_METJA Uncharacterized protein MJECL32
OS=Methanocaldococcus jannaschii GN=MJECL32 PE=4 SV=1
Length = 438

Score = 30.8 bits (68), Expect = 5.2
Identities = 11/40 (27%), Positives = 28/40 (70%)
Frame = -3

Query: 216 KDNHAKLQDAMLQTIAKAGVLEQENNLLKREQDVLILPPN 97
+D+ ++++ + + K ++++EN LL+ ++D++ILP N
Sbjct: 282 EDDFKEIENIIQKLCKKKCIIDKENKLLRVDKDIVILPEN 321


>sp|Q6QUW1|RGP51_LYMST Retrograde protein of 51 kDa OS=Lymnaea
stagnalis GN=RGP51 PE=1 SV=1
Length = 452

Score = 30.4 bits (67), Expect = 6.7
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = -1

Query: 506 KLEEENRALRHTRVENLQTLKD 441
KLE EN ALR+ +VE+LQ ++D
Sbjct: 99 KLEAENEALRNRKVEDLQPIRD 120


>sp|P10587|MYH11_CHICK Myosin-11 OS=Gallus gallus GN=MYH11 PE=1 SV=4
Length = 1979

Score = 30.0 bits (66), Expect = 8.8
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = -3

Query: 486 SLEAH*SRKSADVKGHGTEKKASAHTIKNMDQSMTPALKQIEEVKAEKEK 337
+LEA + ++ EK+A+A T++ D+ + AL Q+E+ + + E+
Sbjct: 1824 ALEAKIASLEEQLEQEAREKQAAAKTLRQKDKKLKDALLQVEDERKQAEQ 1873


>sp|Q73I07|DCD_WOLPM Deoxycytidine triphosphate deaminase
OS=Wolbachia pipientis wMel GN=dcd PE=3 SV=1
Length = 185

Score = 30.0 bits (66), Expect = 8.8
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -3

Query: 147 ENNLLKREQDVLILPPNDQQFLIAAAIEKLR 55
EN+ + +E DV I+PPN F++A+ +E R
Sbjct: 67 ENSFIDKETDVCIIPPN--SFVLASTVEYFR 95


tr_hit_id B5CQB3
Definition tr|B5CQB3|B5CQB3_9FIRM Putative uncharacterized protein OS=Ruminococcus lactaris ATCC 29176
Align length 81
Score (bit) 35.8
E-value 1.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913084|Adiantum capillus-veneris mRNA, clone:
YMU001_000026_C11.
(584 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B5CQB3|B5CQB3_9FIRM Putative uncharacterized protein OS=Rumin... 36 1.8
tr|A9D8B2|A9D8B2_9RHIZ Putative N-formylglutamate amidohydrolase... 35 4.0
tr|B6K8V3|B6K8V3_TOXGO Putative uncharacterized protein OS=Toxop... 34 6.9
tr|A7QFK9|A7QFK9_VITVI Chromosome chr8 scaffold_88, whole genome... 33 9.0

>tr|B5CQB3|B5CQB3_9FIRM Putative uncharacterized protein
OS=Ruminococcus lactaris ATCC 29176 GN=RUMLAC_01658 PE=4
SV=1
Length = 283

Score = 35.8 bits (81), Expect = 1.8
Identities = 25/81 (30%), Positives = 41/81 (50%)
Frame = -3

Query: 276 KQCFDDLKAISLRDGALGVWKDNHAKLQDAMLQTIAKAGVLEQENNLLKREQDVLILPPN 97
K+ D L+A+ + D KD+ KL Q +A AGV+ E + ++ +L PN
Sbjct: 126 KRVEDSLRAVGMLDRR----KDSPNKLSGGQKQRVAIAGVIAMEPKCIVLDEPTAMLDPN 181

Query: 96 DQQFLIAAAIEKLRAAWGTTL 34
++ +I A+EKLR T+
Sbjct: 182 GRKEVI-HAVEKLRREKNVTV 201


>tr|A9D8B2|A9D8B2_9RHIZ Putative N-formylglutamate amidohydrolase
family protein OS=Hoeflea phototrophica DFL-43
GN=HPDFL43_17341 PE=4 SV=1
Length = 264

Score = 34.7 bits (78), Expect = 4.0
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = -3

Query: 246 SLRDGALGVWKDNHAKLQDAMLQTIAKAGVLEQENNLLKREQD 118
+LRDGALG+ D+ +L DAML+ + AG+ N QD
Sbjct: 162 ALRDGALGILHDDDPRLADAMLEAASAAGLEGVRRNYPYGPQD 204


>tr|B6K8V3|B6K8V3_TOXGO Putative uncharacterized protein OS=Toxoplasma
gondii ME49 GN=TGME49_112550 PE=4 SV=1
Length = 1070

Score = 33.9 bits (76), Expect = 6.9
Identities = 24/69 (34%), Positives = 32/69 (46%)
Frame = -2

Query: 385 DSGSQTN*RGESRKRENGSRSGGKNAKDGIAARETEETMLR*PEGYKPERWSFGGMEG*S 206
DS S T G+ K SR G +A+DG AA TEE + P G K + G G
Sbjct: 919 DSVSGTEKSGDMEKGAYMSRDGEDSAQDGGAAETTEEPVC--PSGRKEGKEGKGKSSGAD 976

Query: 205 CEASGCNAS 179
++ GC +
Sbjct: 977 GKSDGCGGA 985


>tr|A7QFK9|A7QFK9_VITVI Chromosome chr8 scaffold_88, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00037464001
PE=4 SV=1
Length = 492

Score = 33.5 bits (75), Expect = 9.0
Identities = 15/53 (28%), Positives = 31/53 (58%)
Frame = -3

Query: 267 FDDLKAISLRDGALGVWKDNHAKLQDAMLQTIAKAGVLEQENNLLKREQDVLI 109
F+ +K + R G +G WK +H KL +A + I + + + E + + E+D+++
Sbjct: 55 FESVKEAASRFGGIGFWKPSHCKLSEAE-RGIEEVDIAQVEEHAAQLEKDLIL 106