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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913088
Clone id YMU001_000026_D03
Library
Length 580
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000026_D03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GATCCCAACAAAGGATTCACCTCTCGACCCTTTTGTTCATCGGGAGGCAGCAGATGCAAA
GAGGCTTTCGTCAGAGCCTGGCATGATCTTCCCCCCACAGATCCTCAGCAGAGTGCCCCT
AGGCCCGCAGATTTTGAGAAAAGGATTCCTACACTCCAGGATCTTCAAGCAAGAGGAAGA
TTAGGATTTTCGGATCTTGACGCACGCACCTTAGCCTCTCCCAATAGGATCAAGGAGGAA
AAGGTCCTCCCGCACCAGCAGTTTTCAGTTCTGCACAGAAGGTCTGTGAAGTCCTCTTCG
ACATCCTCTTCAACTTCATTTCCTTCTGTATCTTCTCCTCTTTGGCAACGCCAGGGGAGC
TCCATTAGGTTAGCTTTCTCTCCAATTCCAAGCTGTTCTCGCTTGCCCCTCTTCCAGGCC
TTGAGATGGCTACCTTGCCATGAGTCCTTCAGAGTCTTCTCAGCTATAGCTGATCGGAAG
AACCCTCCAGATTTGGGCAGTCCTTCTATACCACCATCTGTGAACTATGTAACATCTTCA
GACAACAAAGGTTTGGATGCTGCATCAGCATCTGTGGTGA
■■Homology search results ■■ -
sp_hit_id P13725
Definition sp|P13725|ONCM_HUMAN Oncostatin-M OS=Homo sapiens
Align length 35
Score (bit) 31.2
E-value 3.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913088|Adiantum capillus-veneris mRNA, clone:
YMU001_000026_D03.
         (580 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P13725|ONCM_HUMAN Oncostatin-M OS=Homo sapiens GN=OSM PE=1 SV=2     31   3.9  
sp|Q9C0C2|TB182_HUMAN 182 kDa tankyrase 1-binding protein OS=Hom...    30   6.7  
sp|Q59NP8|SPB42_CANAL ATP-dependent rRNA helicase SPB42 OS=Candi...    30   8.7  
sp|Q9FZL3|MGDG_TOBAC Probable monogalactosyldiacylglycerol synth...    30   8.7  

>sp|P13725|ONCM_HUMAN Oncostatin-M OS=Homo sapiens GN=OSM PE=1 SV=2
          Length = 252

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +1

Query: 121 RPADFEKRIPTLQDLQARGRLGFSDLDARTLASPN 225
           R AD E+R+P  QDL+  G L   DL+   +A PN
Sbjct: 109 RLADLEQRLPKAQDLERSG-LNIEDLEKLQMARPN 142


>sp|Q9C0C2|TB182_HUMAN 182 kDa tankyrase 1-binding protein OS=Homo
            sapiens GN=TNKS1BP1 PE=1 SV=3
          Length = 1729

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = +1

Query: 25   RPFCSSGGSRCKEAFVRAWHDLPPTD---PQQSAPRPADFEKRIPTLQDLQARG 177
            R + S G SR  +A  R++   P +    P+++  +  +FEK+IP+++D    G
Sbjct: 959  RDYSSGGSSRTLDAQDRSFGTRPLSSGFSPEEAQQQDEEFEKKIPSVEDSLGEG 1012


>sp|Q59NP8|SPB42_CANAL ATP-dependent rRNA helicase SPB42 OS=Candida
           albicans GN=SPB42 PE=3 SV=1
          Length = 631

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -1

Query: 388 ELERKLT*WSSPGVAKEEKIQKEMKLKRMSKRTSQTFCAELKTAGAG 248
           EL+ K   WSS    KE K+ ++ KLKR  +   +    E ++ G G
Sbjct: 549 ELKIKNEAWSSKSERKENKLDRKEKLKRKREAIEKQIMEEERSNGGG 595


>sp|Q9FZL3|MGDG_TOBAC Probable monogalactosyldiacylglycerol
           synthase, chloroplastic OS=Nicotiana tabacum GN=MGD A
           PE=2 SV=1
          Length = 535

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +1

Query: 394 CSRLPLFQALRWLPCHES--FRVFSAIADRKNPPDLGSPSIPPSVNYVTSSDNKGLDAAS 567
           C ++PL  A   + C ES   R   ++ + +  PD G  S PP    +  SD  G   AS
Sbjct: 102 CEKIPLGFASVGVNCGESNGVREEGSVVENEGIPDNGVESEPPKKVLILMSDTGGGHRAS 161

Query: 568 ASVV 579
           A  +
Sbjct: 162 AEAI 165
tr_hit_id Q67UZ3
Definition tr|Q67UZ3|Q67UZ3_ORYSJ Os09g0453400 protein OS=Oryza sativa subsp. japonica
Align length 72
Score (bit) 37.7
E-value 0.47
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913088|Adiantum capillus-veneris mRNA, clone:
YMU001_000026_D03.
         (580 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q67UZ3|Q67UZ3_ORYSJ Os09g0453400 protein OS=Oryza sativa subs...    38   0.47 
tr|A2Z1Y4|A2Z1Y4_ORYSI Putative uncharacterized protein OS=Oryza...    38   0.47 
tr|B7A4C2|B7A4C2_ECO57 Putative uncharacterized protein OS=Esche...    35   3.0  
tr|B7A164|B7A164_ECO57 Putative uncharacterized protein OS=Esche...    35   3.0  
tr|B6ZT88|B6ZT88_ECO57 Putative uncharacterized protein OS=Esche...    35   3.0  
tr|B3BML2|B3BML2_ECO57 Putative uncharacterized protein OS=Esche...    35   3.0  
tr|B3AVF0|B3AVF0_ECO57 Putative uncharacterized protein (Fragmen...    35   3.0  
tr|B8LNH9|B8LNH9_PICSI Putative uncharacterized protein OS=Picea...    35   3.0  
tr|B6TF59|B6TF59_MAIZE Peptidase/ serine-type peptidase OS=Zea m...    35   3.0  
tr|Q9J8B2|Q9J8B2_9ABAC ORF23 OS=Spodoptera exigua MNPV PE=4 SV=1       34   5.1  
tr|B2QFB4|B2QFB4_9BACL Putative uncharacterized protein OS=Exigu...    34   5.2  
tr|B6MZH1|B6MZH1_BRAFL Putative uncharacterized protein OS=Branc...    34   5.2  

>tr|Q67UZ3|Q67UZ3_ORYSJ Os09g0453400 protein OS=Oryza sativa subsp.
           japonica GN=P0488D02.23 PE=3 SV=1
          Length = 411

 Score = 37.7 bits (86), Expect = 0.47
 Identities = 26/72 (36%), Positives = 34/72 (47%)
 Frame = +1

Query: 358 SSIRLAFSPIPSCSRLPLFQALRWLPCHESFRVFSAIADRKNPPDLGSPSIPPSVNYVTS 537
           SSI L F+P    S LP  Q  +WLPC +     SA      PP   SPS PP     + 
Sbjct: 138 SSISLGFNP---ASFLPFLQTSKWLPCSDLATSSSA------PPSSPSPSPPPPAPAPSI 188

Query: 538 SDNKGLDAASAS 573
              K L ++++S
Sbjct: 189 RPKKALVSSASS 200


>tr|A2Z1Y4|A2Z1Y4_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_31616 PE=3 SV=1
          Length = 411

 Score = 37.7 bits (86), Expect = 0.47
 Identities = 26/72 (36%), Positives = 34/72 (47%)
 Frame = +1

Query: 358 SSIRLAFSPIPSCSRLPLFQALRWLPCHESFRVFSAIADRKNPPDLGSPSIPPSVNYVTS 537
           SSI L F+P    S LP  Q  +WLPC +     SA      PP   SPS PP     + 
Sbjct: 138 SSISLGFNP---ASFLPFLQTSKWLPCSDLATSSSA------PPSSPSPSPPPPAPAPSI 188

Query: 538 SDNKGLDAASAS 573
              K L ++++S
Sbjct: 189 RPKKALVSSASS 200


>tr|B7A4C2|B7A4C2_ECO57 Putative uncharacterized protein
           OS=Escherichia coli O157:H7 str. TW14588
           GN=ESCCO14588_4489 PE=4 SV=1
          Length = 286

 Score = 35.0 bits (79), Expect = 3.0
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = +1

Query: 382 PIPSCSRLPLFQALRWLPCHESFRVFSAIADRKNPPDLGSPSIPPSV 522
           P+  C  LP      WL C  S R    +    +PP   +P +PPSV
Sbjct: 209 PLLKCQHLPRSLLPDWLICRHSSRTSPPLRHSSSPPQRDAPLLPPSV 255


>tr|B7A164|B7A164_ECO57 Putative uncharacterized protein
           OS=Escherichia coli O157:H7 str. TW14588
           GN=ESCCO14588_4252 PE=4 SV=1
          Length = 286

 Score = 35.0 bits (79), Expect = 3.0
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = +1

Query: 382 PIPSCSRLPLFQALRWLPCHESFRVFSAIADRKNPPDLGSPSIPPSV 522
           P+  C  LP      WL C  S R    +    +PP   +P +PPSV
Sbjct: 209 PLLKCQHLPRSLLPDWLICRHSSRTSPPLRHSSSPPQRDAPLLPPSV 255


>tr|B6ZT88|B6ZT88_ECO57 Putative uncharacterized protein
           OS=Escherichia coli O157:H7 str. TW14588
           GN=ESCCO14588_2567 PE=4 SV=1
          Length = 286

 Score = 35.0 bits (79), Expect = 3.0
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = +1

Query: 382 PIPSCSRLPLFQALRWLPCHESFRVFSAIADRKNPPDLGSPSIPPSV 522
           P+  C  LP      WL C  S R    +    +PP   +P +PPSV
Sbjct: 209 PLLKCQHLPRSLLPDWLICRHSSRTSPPLRHSSSPPQRDAPLLPPSV 255


>tr|B3BML2|B3BML2_ECO57 Putative uncharacterized protein
           OS=Escherichia coli O157:H7 str. EC869 GN=ECH7EC869_3399
           PE=4 SV=1
          Length = 180

 Score = 35.0 bits (79), Expect = 3.0
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = +1

Query: 382 PIPSCSRLPLFQALRWLPCHESFRVFSAIADRKNPPDLGSPSIPPSV 522
           P+  C  LP      WL C  S R    +    +PP   +P +PPSV
Sbjct: 103 PLLKCQHLPRSLLPDWLICRHSSRTSPPLRHSSSPPQRDAPLLPPSV 149


>tr|B3AVF0|B3AVF0_ECO57 Putative uncharacterized protein (Fragment)
           OS=Escherichia coli O157:H7 str. EC4486
           GN=ECH7EC4486_1493 PE=4 SV=1
          Length = 247

 Score = 35.0 bits (79), Expect = 3.0
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = +1

Query: 382 PIPSCSRLPLFQALRWLPCHESFRVFSAIADRKNPPDLGSPSIPPSV 522
           P+  C  LP      WL C  S R    +    +PP   +P +PPSV
Sbjct: 196 PLLKCQHLPRSLLPDWLICRHSSRTSPPLRHSSSPPQRDAPLLPPSV 242


>tr|B8LNH9|B8LNH9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 400

 Score = 35.0 bits (79), Expect = 3.0
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +1

Query: 385 IPSCSRLPLFQALRWLPCHESFR 453
           + S + +P FQ L+WLPCHE F+
Sbjct: 127 LKSSTMIPFFQGLKWLPCHEFFQ 149


>tr|B6TF59|B6TF59_MAIZE Peptidase/ serine-type peptidase OS=Zea mays
           PE=2 SV=1
          Length = 396

 Score = 35.0 bits (79), Expect = 3.0
 Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
 Frame = +1

Query: 358 SSIRLAFSPIPSCSRLPLFQALRWLPCHESFRVFSAIADRKNPPDLGSPSIPPSVNYV-T 534
           S I L F+P    S LP  Q  RWLPC  S    S+ +   +PP   +PS PP    +  
Sbjct: 129 SPISLGFNPT---SFLPFLQTARWLPC--SDLATSSSSAPSSPPRSLAPSAPPKKALIGA 183

Query: 535 SSDNKGLDAASAS 573
           S+ + G+  +S +
Sbjct: 184 STGSTGIATSSGA 196


>tr|Q9J8B2|Q9J8B2_9ABAC ORF23 OS=Spodoptera exigua MNPV PE=4 SV=1
          Length = 211

 Score = 34.3 bits (77), Expect = 5.1
 Identities = 14/34 (41%), Positives = 25/34 (73%)
 Frame = +3

Query: 261 VFSSAQKVCEVLFDILFNFISFCIFSSLATPGEL 362
           +FS+A +VC+++   L NF+ +C+ + L+TPG L
Sbjct: 175 LFSAAARVCQIVSWELNNFVVWCVSALLSTPGPL 208