BP913088
Clone id YMU001_000026_D03
Library
Length 580
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000026_D03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GATCCCAACAAAGGATTCACCTCTCGACCCTTTTGTTCATCGGGAGGCAGCAGATGCAAA
GAGGCTTTCGTCAGAGCCTGGCATGATCTTCCCCCCACAGATCCTCAGCAGAGTGCCCCT
AGGCCCGCAGATTTTGAGAAAAGGATTCCTACACTCCAGGATCTTCAAGCAAGAGGAAGA
TTAGGATTTTCGGATCTTGACGCACGCACCTTAGCCTCTCCCAATAGGATCAAGGAGGAA
AAGGTCCTCCCGCACCAGCAGTTTTCAGTTCTGCACAGAAGGTCTGTGAAGTCCTCTTCG
ACATCCTCTTCAACTTCATTTCCTTCTGTATCTTCTCCTCTTTGGCAACGCCAGGGGAGC
TCCATTAGGTTAGCTTTCTCTCCAATTCCAAGCTGTTCTCGCTTGCCCCTCTTCCAGGCC
TTGAGATGGCTACCTTGCCATGAGTCCTTCAGAGTCTTCTCAGCTATAGCTGATCGGAAG
AACCCTCCAGATTTGGGCAGTCCTTCTATACCACCATCTGTGAACTATGTAACATCTTCA
GACAACAAAGGTTTGGATGCTGCATCAGCATCTGTGGTGA
■■Homology search results ■■ -
sp_hit_id P13725
Definition sp|P13725|ONCM_HUMAN Oncostatin-M OS=Homo sapiens
Align length 35
Score (bit) 31.2
E-value 3.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913088|Adiantum capillus-veneris mRNA, clone:
YMU001_000026_D03.
(580 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P13725|ONCM_HUMAN Oncostatin-M OS=Homo sapiens GN=OSM PE=1 SV=2 31 3.9
sp|Q9C0C2|TB182_HUMAN 182 kDa tankyrase 1-binding protein OS=Hom... 30 6.7
sp|Q59NP8|SPB42_CANAL ATP-dependent rRNA helicase SPB42 OS=Candi... 30 8.7
sp|Q9FZL3|MGDG_TOBAC Probable monogalactosyldiacylglycerol synth... 30 8.7

>sp|P13725|ONCM_HUMAN Oncostatin-M OS=Homo sapiens GN=OSM PE=1 SV=2
Length = 252

Score = 31.2 bits (69), Expect = 3.9
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1

Query: 121 RPADFEKRIPTLQDLQARGRLGFSDLDARTLASPN 225
R AD E+R+P QDL+ G L DL+ +A PN
Sbjct: 109 RLADLEQRLPKAQDLERSG-LNIEDLEKLQMARPN 142


>sp|Q9C0C2|TB182_HUMAN 182 kDa tankyrase 1-binding protein OS=Homo
sapiens GN=TNKS1BP1 PE=1 SV=3
Length = 1729

Score = 30.4 bits (67), Expect = 6.7
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +1

Query: 25 RPFCSSGGSRCKEAFVRAWHDLPPTD---PQQSAPRPADFEKRIPTLQDLQARG 177
R + S G SR +A R++ P + P+++ + +FEK+IP+++D G
Sbjct: 959 RDYSSGGSSRTLDAQDRSFGTRPLSSGFSPEEAQQQDEEFEKKIPSVEDSLGEG 1012


>sp|Q59NP8|SPB42_CANAL ATP-dependent rRNA helicase SPB42 OS=Candida
albicans GN=SPB42 PE=3 SV=1
Length = 631

Score = 30.0 bits (66), Expect = 8.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -1

Query: 388 ELERKLT*WSSPGVAKEEKIQKEMKLKRMSKRTSQTFCAELKTAGAG 248
EL+ K WSS KE K+ ++ KLKR + + E ++ G G
Sbjct: 549 ELKIKNEAWSSKSERKENKLDRKEKLKRKREAIEKQIMEEERSNGGG 595


>sp|Q9FZL3|MGDG_TOBAC Probable monogalactosyldiacylglycerol
synthase, chloroplastic OS=Nicotiana tabacum GN=MGD A
PE=2 SV=1
Length = 535

Score = 30.0 bits (66), Expect = 8.7
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +1

Query: 394 CSRLPLFQALRWLPCHES--FRVFSAIADRKNPPDLGSPSIPPSVNYVTSSDNKGLDAAS 567
C ++PL A + C ES R ++ + + PD G S PP + SD G AS
Sbjct: 102 CEKIPLGFASVGVNCGESNGVREEGSVVENEGIPDNGVESEPPKKVLILMSDTGGGHRAS 161

Query: 568 ASVV 579
A +
Sbjct: 162 AEAI 165


tr_hit_id Q67UZ3
Definition tr|Q67UZ3|Q67UZ3_ORYSJ Os09g0453400 protein OS=Oryza sativa subsp. japonica
Align length 72
Score (bit) 37.7
E-value 0.47
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913088|Adiantum capillus-veneris mRNA, clone:
YMU001_000026_D03.
(580 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q67UZ3|Q67UZ3_ORYSJ Os09g0453400 protein OS=Oryza sativa subs... 38 0.47
tr|A2Z1Y4|A2Z1Y4_ORYSI Putative uncharacterized protein OS=Oryza... 38 0.47
tr|B7A4C2|B7A4C2_ECO57 Putative uncharacterized protein OS=Esche... 35 3.0
tr|B7A164|B7A164_ECO57 Putative uncharacterized protein OS=Esche... 35 3.0
tr|B6ZT88|B6ZT88_ECO57 Putative uncharacterized protein OS=Esche... 35 3.0
tr|B3BML2|B3BML2_ECO57 Putative uncharacterized protein OS=Esche... 35 3.0
tr|B3AVF0|B3AVF0_ECO57 Putative uncharacterized protein (Fragmen... 35 3.0
tr|B8LNH9|B8LNH9_PICSI Putative uncharacterized protein OS=Picea... 35 3.0
tr|B6TF59|B6TF59_MAIZE Peptidase/ serine-type peptidase OS=Zea m... 35 3.0
tr|Q9J8B2|Q9J8B2_9ABAC ORF23 OS=Spodoptera exigua MNPV PE=4 SV=1 34 5.1
tr|B2QFB4|B2QFB4_9BACL Putative uncharacterized protein OS=Exigu... 34 5.2
tr|B6MZH1|B6MZH1_BRAFL Putative uncharacterized protein OS=Branc... 34 5.2

>tr|Q67UZ3|Q67UZ3_ORYSJ Os09g0453400 protein OS=Oryza sativa subsp.
japonica GN=P0488D02.23 PE=3 SV=1
Length = 411

Score = 37.7 bits (86), Expect = 0.47
Identities = 26/72 (36%), Positives = 34/72 (47%)
Frame = +1

Query: 358 SSIRLAFSPIPSCSRLPLFQALRWLPCHESFRVFSAIADRKNPPDLGSPSIPPSVNYVTS 537
SSI L F+P S LP Q +WLPC + SA PP SPS PP +
Sbjct: 138 SSISLGFNP---ASFLPFLQTSKWLPCSDLATSSSA------PPSSPSPSPPPPAPAPSI 188

Query: 538 SDNKGLDAASAS 573
K L ++++S
Sbjct: 189 RPKKALVSSASS 200


>tr|A2Z1Y4|A2Z1Y4_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_31616 PE=3 SV=1
Length = 411

Score = 37.7 bits (86), Expect = 0.47
Identities = 26/72 (36%), Positives = 34/72 (47%)
Frame = +1

Query: 358 SSIRLAFSPIPSCSRLPLFQALRWLPCHESFRVFSAIADRKNPPDLGSPSIPPSVNYVTS 537
SSI L F+P S LP Q +WLPC + SA PP SPS PP +
Sbjct: 138 SSISLGFNP---ASFLPFLQTSKWLPCSDLATSSSA------PPSSPSPSPPPPAPAPSI 188

Query: 538 SDNKGLDAASAS 573
K L ++++S
Sbjct: 189 RPKKALVSSASS 200


>tr|B7A4C2|B7A4C2_ECO57 Putative uncharacterized protein
OS=Escherichia coli O157:H7 str. TW14588
GN=ESCCO14588_4489 PE=4 SV=1
Length = 286

Score = 35.0 bits (79), Expect = 3.0
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1

Query: 382 PIPSCSRLPLFQALRWLPCHESFRVFSAIADRKNPPDLGSPSIPPSV 522
P+ C LP WL C S R + +PP +P +PPSV
Sbjct: 209 PLLKCQHLPRSLLPDWLICRHSSRTSPPLRHSSSPPQRDAPLLPPSV 255


>tr|B7A164|B7A164_ECO57 Putative uncharacterized protein
OS=Escherichia coli O157:H7 str. TW14588
GN=ESCCO14588_4252 PE=4 SV=1
Length = 286

Score = 35.0 bits (79), Expect = 3.0
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1

Query: 382 PIPSCSRLPLFQALRWLPCHESFRVFSAIADRKNPPDLGSPSIPPSV 522
P+ C LP WL C S R + +PP +P +PPSV
Sbjct: 209 PLLKCQHLPRSLLPDWLICRHSSRTSPPLRHSSSPPQRDAPLLPPSV 255


>tr|B6ZT88|B6ZT88_ECO57 Putative uncharacterized protein
OS=Escherichia coli O157:H7 str. TW14588
GN=ESCCO14588_2567 PE=4 SV=1
Length = 286

Score = 35.0 bits (79), Expect = 3.0
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1

Query: 382 PIPSCSRLPLFQALRWLPCHESFRVFSAIADRKNPPDLGSPSIPPSV 522
P+ C LP WL C S R + +PP +P +PPSV
Sbjct: 209 PLLKCQHLPRSLLPDWLICRHSSRTSPPLRHSSSPPQRDAPLLPPSV 255


>tr|B3BML2|B3BML2_ECO57 Putative uncharacterized protein
OS=Escherichia coli O157:H7 str. EC869 GN=ECH7EC869_3399
PE=4 SV=1
Length = 180

Score = 35.0 bits (79), Expect = 3.0
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1

Query: 382 PIPSCSRLPLFQALRWLPCHESFRVFSAIADRKNPPDLGSPSIPPSV 522
P+ C LP WL C S R + +PP +P +PPSV
Sbjct: 103 PLLKCQHLPRSLLPDWLICRHSSRTSPPLRHSSSPPQRDAPLLPPSV 149


>tr|B3AVF0|B3AVF0_ECO57 Putative uncharacterized protein (Fragment)
OS=Escherichia coli O157:H7 str. EC4486
GN=ECH7EC4486_1493 PE=4 SV=1
Length = 247

Score = 35.0 bits (79), Expect = 3.0
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1

Query: 382 PIPSCSRLPLFQALRWLPCHESFRVFSAIADRKNPPDLGSPSIPPSV 522
P+ C LP WL C S R + +PP +P +PPSV
Sbjct: 196 PLLKCQHLPRSLLPDWLICRHSSRTSPPLRHSSSPPQRDAPLLPPSV 242


>tr|B8LNH9|B8LNH9_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 400

Score = 35.0 bits (79), Expect = 3.0
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1

Query: 385 IPSCSRLPLFQALRWLPCHESFR 453
+ S + +P FQ L+WLPCHE F+
Sbjct: 127 LKSSTMIPFFQGLKWLPCHEFFQ 149


>tr|B6TF59|B6TF59_MAIZE Peptidase/ serine-type peptidase OS=Zea mays
PE=2 SV=1
Length = 396

Score = 35.0 bits (79), Expect = 3.0
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1

Query: 358 SSIRLAFSPIPSCSRLPLFQALRWLPCHESFRVFSAIADRKNPPDLGSPSIPPSVNYV-T 534
S I L F+P S LP Q RWLPC S S+ + +PP +PS PP +
Sbjct: 129 SPISLGFNPT---SFLPFLQTARWLPC--SDLATSSSSAPSSPPRSLAPSAPPKKALIGA 183

Query: 535 SSDNKGLDAASAS 573
S+ + G+ +S +
Sbjct: 184 STGSTGIATSSGA 196


>tr|Q9J8B2|Q9J8B2_9ABAC ORF23 OS=Spodoptera exigua MNPV PE=4 SV=1
Length = 211

Score = 34.3 bits (77), Expect = 5.1
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = +3

Query: 261 VFSSAQKVCEVLFDILFNFISFCIFSSLATPGEL 362
+FS+A +VC+++ L NF+ +C+ + L+TPG L
Sbjct: 175 LFSAAARVCQIVSWELNNFVVWCVSALLSTPGPL 208