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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913096
Clone id YMU001_000026_D11
Library
Length 543
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000026_D11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CGGCCGCATAGACAACGAATTATGACTAACTTCTTTAAATATCGTAGAGTCCAAAGAGCT
TGCGCCAAATGTGGCTTGCAAGTCTCTAAAAAATGAACACAGAAGTCCCATTGGAAAACT
AACATCAAACGAGTATTGAGTGACTCCATCCTCGAAGAATGACCTTGGAGTCAGCCGCAT
TGACAACGAATTATGATTGGCTGCTTTAAATACCGTAGAGTCTTGCTCTAAATGTGACTT
GCAGGTCTCTGAATAAACGAACTCAAAAGTCCCATCTAAAAACGGACATTGAACGAGTAT
TGAGTGCCCAAATAAGAGAACCGACCAGCTTTCAATACTTTGTAGCATCTACTACATCTG
AGACGTCATACTGTGACAACTTCCAGTTGGGATCCATAGGAGATTTGAAAAATTTGTTAT
GCACGCAAAAATACTTACCATTGGAAAAAAACTAACTATACTGGGCATTCTGAAACAATT
TCAAAAGACACTTAGAGACGGTACTTCTAGAAGATCAAACAATTCCAAGTAGATCCCAAA
AGC
■■Homology search results ■■ -
sp_hit_id Q9P381
Definition sp|Q9P381|CDSH_SCHPO Putative phosphatidate cytidylyltransferase OS=Schizosaccharomyces pombe
Align length 86
Score (bit) 30.4
E-value 5.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913096|Adiantum capillus-veneris mRNA, clone:
YMU001_000026_D11.
         (520 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9P381|CDSH_SCHPO Putative phosphatidate cytidylyltransferase...    30   5.3  
sp|Q5WSE7|RNPA_LEGPL Ribonuclease P protein component OS=Legione...    30   9.0  
sp|A5IIK5|RNPA_LEGPC Ribonuclease P protein component OS=Legione...    30   9.0  
sp|Q5X0M0|RNPA_LEGPA Ribonuclease P protein component OS=Legione...    30   9.0  

>sp|Q9P381|CDSH_SCHPO Putative phosphatidate cytidylyltransferase
           OS=Schizosaccharomyces pombe GN=SPBC13A2.03 PE=1 SV=1
          Length = 439

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
 Frame = -2

Query: 492 SVF*NCFRMPSIVSFFPMVSIFACITNFSNLLWIPTGSCHXXXXXXXXXXXSIESWSVLL 313
           +VF + FR+P  ++  P+    A    FS+L+  P G               I+ +   +
Sbjct: 302 AVFVDTFRLPETITLAPIYFHLAIFATFSSLI-APFGG---FFASGLKRAFKIKDFGASI 357

Query: 312 FGHSIL---VQCPFLDGTFEFVYSET 244
            GH  L   + C FL+G F ++Y ++
Sbjct: 358 PGHGGLTDRMDCQFLNGVFVYMYFQS 383


>sp|Q5WSE7|RNPA_LEGPL Ribonuclease P protein component OS=Legionella
           pneumophila (strain Lens) GN=rnpA PE=3 SV=1
          Length = 114

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +1

Query: 34  FKYRRVQRACAKCGLQVSKK*TQKSHWKTNIKRVLSDS 147
           F +R  +   A+ GL +SKK   K+H +  IKR+L +S
Sbjct: 33  FLFRENKLGYARLGLALSKKMIAKAHDRNRIKRLLRES 70


>sp|A5IIK5|RNPA_LEGPC Ribonuclease P protein component OS=Legionella
           pneumophila (strain Corby) GN=rnpA PE=3 SV=1
          Length = 114

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +1

Query: 34  FKYRRVQRACAKCGLQVSKK*TQKSHWKTNIKRVLSDS 147
           F +R  +   A+ GL +SKK   K+H +  IKR+L +S
Sbjct: 33  FLFRENKLGYARLGLALSKKMIAKAHDRNRIKRLLRES 70


>sp|Q5X0M0|RNPA_LEGPA Ribonuclease P protein component OS=Legionella
           pneumophila (strain Paris) GN=rnpA PE=3 SV=1
          Length = 114

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +1

Query: 34  FKYRRVQRACAKCGLQVSKK*TQKSHWKTNIKRVLSDS 147
           F +R  +   A+ GL +SKK   K+H +  IKR+L +S
Sbjct: 33  FLFRENKLGYARLGLALSKKMIAKAHDRNRIKRLLRES 70
tr_hit_id A5BGK7
Definition tr|A5BGK7|A5BGK7_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 48
Score (bit) 40.8
E-value 0.041
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913096|Adiantum capillus-veneris mRNA, clone:
YMU001_000026_D11.
         (520 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5BGK7|A5BGK7_VITVI Putative uncharacterized protein OS=Vitis...    41   0.041
tr|Q7XEA3|Q7XEA3_ORYSJ Retrotransposon protein, putative, Ty1-co...    40   0.053
tr|Q7FAB9|Q7FAB9_ORYSJ OSJNBa0033H08.2 protein OS=Oryza sativa s...    40   0.053
tr|Q75IL9|Q75IL9_ORYSJ Pupative polyprotein OS=Oryza sativa subs...    40   0.053
tr|Q2R072|Q2R072_ORYSJ Retrotransposon protein, putative, unclas...    40   0.053
tr|Q2QZL2|Q2QZL2_ORYSJ Retrotransposon protein, putative, unclas...    40   0.053
tr|Q2QWX3|Q2QWX3_ORYSJ Retrotransposon protein, putative, unclas...    40   0.053
tr|Q0JE84|Q0JE84_ORYSJ Os04g0311300 protein OS=Oryza sativa subs...    40   0.053
tr|Q0IRB1|Q0IRB1_ORYSJ Os11g0656500 protein (Fragment) OS=Oryza ...    40   0.053
tr|Q0IR42|Q0IR42_ORYSJ Os11g0682500 protein (Fragment) OS=Oryza ...    40   0.053
tr|Q01M13|Q01M13_ORYSA OSIGBa0148D14.8 protein (OSIGBa0130O15.1 ...    40   0.053
tr|B8BH06|B8BH06_ORYSI Putative uncharacterized protein OS=Oryza...    40   0.053
tr|A5C7V7|A5C7V7_VITVI Putative uncharacterized protein OS=Vitis...    40   0.053
tr|Q7XNT4|Q7XNT4_ORYSJ OSJNBb0085H11.3 protein OS=Oryza sativa s...    40   0.069
tr|Q01L22|Q01L22_ORYSA OSIGBa0106G08.2 protein OS=Oryza sativa G...    40   0.069
tr|A5C788|A5C788_VITVI Putative uncharacterized protein OS=Vitis...    40   0.069
tr|A5BZB2|A5BZB2_VITVI Putative uncharacterized protein OS=Vitis...    40   0.069
tr|Q0J5Y3|Q0J5Y3_ORYSJ Os08g0389500 protein OS=Oryza sativa subs...    39   0.15 
tr|A5ASK2|A5ASK2_VITVI Putative uncharacterized protein OS=Vitis...    39   0.20 
tr|A5AIQ4|A5AIQ4_VITVI Putative uncharacterized protein OS=Vitis...    38   0.26 
tr|Q2RBR6|Q2RBR6_ORYSJ Os11g0101300 protein OS=Oryza sativa subs...    38   0.34 
tr|Q2QYZ3|Q2QYZ3_ORYSJ Retrotransposon protein, putative, Ty1-co...    38   0.34 
tr|A5BFS0|A5BFS0_VITVI Putative uncharacterized protein OS=Vitis...    38   0.34 
tr|A5BAK9|A5BAK9_VITVI Putative uncharacterized protein OS=Vitis...    38   0.34 
tr|A5AKW8|A5AKW8_VITVI Putative uncharacterized protein OS=Vitis...    38   0.34 
tr|Q6ATM2|Q6ATM2_ORYSJ Putative polyprotein OS=Oryza sativa subs...    37   0.45 
tr|Q10JF7|Q10JF7_ORYSJ Retrotransposon protein, putative, Ty1-co...    37   0.45 
tr|A5B8P9|A5B8P9_VITVI Putative uncharacterized protein OS=Vitis...    37   0.45 
tr|A5AYJ3|A5AYJ3_VITVI Putative uncharacterized protein OS=Vitis...    37   0.45 
tr|A5ALW2|A5ALW2_VITVI Putative uncharacterized protein OS=Vitis...    37   0.45 

>tr|A5BGK7|A5BGK7_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_007301 PE=4 SV=1
          Length = 973

 Score = 40.8 bits (94), Expect = 0.041
 Identities = 19/48 (39%), Positives = 31/48 (64%)
 Frame = -1

Query: 436 KYFCVHNKFFKSPMDPNWKLSQYDVSDVVDATKY*KLVGSLIWALNTR 293
           K+  +  K   +PM+PN K+ +++  D+ DAT Y +LVGSL++   TR
Sbjct: 713 KFGMLECKSISTPMEPNAKMCEHEGKDLKDATMYRQLVGSLVYLTLTR 760


>tr|Q7XEA3|Q7XEA3_ORYSJ Retrotransposon protein, putative, Ty1-copia
            subclass OS=Oryza sativa subsp. japonica
            GN=LOC_Os10g29420 PE=4 SV=2
          Length = 1805

 Score = 40.4 bits (93), Expect = 0.053
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = -1

Query: 403  SPMDPNWKLSQYDVSDVVDATKY*KLVGSLIWALNTR 293
            +PM+P  KLS+     +VDAT+Y  LVGSL + +NTR
Sbjct: 1385 TPMEPRLKLSKESAGSLVDATEYRSLVGSLRYLVNTR 1421


>tr|Q7FAB9|Q7FAB9_ORYSJ OSJNBa0033H08.2 protein OS=Oryza sativa subsp.
            japonica GN=OSJNBa0033H08.2 PE=4 SV=1
          Length = 1479

 Score = 40.4 bits (93), Expect = 0.053
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = -1

Query: 403  SPMDPNWKLSQYDVSDVVDATKY*KLVGSLIWALNTR 293
            +PM+P  KLS+     +VDAT+Y  LVGSL + +NTR
Sbjct: 1229 TPMEPRLKLSKESAGSLVDATEYRSLVGSLHYLVNTR 1265


>tr|Q75IL9|Q75IL9_ORYSJ Pupative polyprotein OS=Oryza sativa subsp.
            japonica GN=P0683F12.10 PE=4 SV=1
          Length = 1404

 Score = 40.4 bits (93), Expect = 0.053
 Identities = 19/38 (50%), Positives = 27/38 (71%)
 Frame = -1

Query: 406  KSPMDPNWKLSQYDVSDVVDATKY*KLVGSLIWALNTR 293
            ++PM+P  KLS+   S  VDAT Y K+VGSL + +N+R
Sbjct: 1156 QTPMEPRLKLSKLSTSPCVDATDYRKIVGSLRYLVNSR 1193


>tr|Q2R072|Q2R072_ORYSJ Retrotransposon protein, putative,
            unclassified, expressed OS=Oryza sativa subsp. japonica
            GN=LOC_Os11g43560 PE=4 SV=2
          Length = 1400

 Score = 40.4 bits (93), Expect = 0.053
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = -1

Query: 403  SPMDPNWKLSQYDVSDVVDATKY*KLVGSLIWALNTR 293
            +PM+P  KLS+     +VDAT+Y  LVGSL + +NTR
Sbjct: 1155 TPMEPRLKLSKESAGSLVDATEYRSLVGSLRYLVNTR 1191


>tr|Q2QZL2|Q2QZL2_ORYSJ Retrotransposon protein, putative,
            unclassified, expressed OS=Oryza sativa subsp. japonica
            GN=LOC_Os11g45610 PE=2 SV=1
          Length = 1369

 Score = 40.4 bits (93), Expect = 0.053
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = -1

Query: 403  SPMDPNWKLSQYDVSDVVDATKY*KLVGSLIWALNTR 293
            +PM+P  KLS+     +VDAT+Y  LVGSL + +NTR
Sbjct: 1129 TPMEPRLKLSKESAGSLVDATEYRSLVGSLRYLVNTR 1165


>tr|Q2QWX3|Q2QWX3_ORYSJ Retrotransposon protein, putative,
            unclassified OS=Oryza sativa subsp. japonica
            GN=LOC_Os12g07910 PE=4 SV=1
          Length = 1629

 Score = 40.4 bits (93), Expect = 0.053
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = -1

Query: 403  SPMDPNWKLSQYDVSDVVDATKY*KLVGSLIWALNTR 293
            +PM+P  KLS+     +VDAT+Y  LVGSL + +NTR
Sbjct: 1175 TPMEPRLKLSKESAGSLVDATEYRSLVGSLRYLVNTR 1211


>tr|Q0JE84|Q0JE84_ORYSJ Os04g0311300 protein OS=Oryza sativa subsp.
            japonica GN=Os04g0311300 PE=4 SV=1
          Length = 2135

 Score = 40.4 bits (93), Expect = 0.053
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = -1

Query: 403  SPMDPNWKLSQYDVSDVVDATKY*KLVGSLIWALNTR 293
            +PM+P  KLS+     +VDAT+Y  LVGSL + +NTR
Sbjct: 1180 TPMEPRLKLSKESAGSLVDATEYRSLVGSLHYLVNTR 1216


>tr|Q0IRB1|Q0IRB1_ORYSJ Os11g0656500 protein (Fragment) OS=Oryza
            sativa subsp. japonica GN=Os11g0656500 PE=4 SV=1
          Length = 1428

 Score = 40.4 bits (93), Expect = 0.053
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = -1

Query: 403  SPMDPNWKLSQYDVSDVVDATKY*KLVGSLIWALNTR 293
            +PM+P  KLS+     +VDAT+Y  LVGSL + +NTR
Sbjct: 1183 TPMEPRLKLSKESAGSLVDATEYRSLVGSLRYLVNTR 1219


>tr|Q0IR42|Q0IR42_ORYSJ Os11g0682500 protein (Fragment) OS=Oryza
            sativa subsp. japonica GN=Os11g0682500 PE=4 SV=1
          Length = 1457

 Score = 40.4 bits (93), Expect = 0.053
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = -1

Query: 403  SPMDPNWKLSQYDVSDVVDATKY*KLVGSLIWALNTR 293
            +PM+P  KLS+     +VDAT+Y  LVGSL + +NTR
Sbjct: 1217 TPMEPRLKLSKESAGSLVDATEYRSLVGSLRYLVNTR 1253