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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913098
Clone id YMU001_000026_E01
Library
Length 519
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000026_E01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GTAAGGAGAGGGTCTTTCATACTAGCTGATGATGCAAGCTCTTCCCATAAGCCTGAAGCC
AGGNATCAAGGAAGGGGAAGTGTTTTACATCAAATGTCTGGAGTTGAACATGATGGTCAA
AGTGGTTCCAACAGTAGGAGAGATGTGAGGAGAGGGTCTTTCATACTCGTTGAAGATGCA
AGCTCCTCCTCACCTGAAGGAAGGTATTAAACAAAGGGAAGGGTGGGTACCTTGAAGGAT
GATGGATTGCAAGAGAAGTCGACCTCTGAGTCTGCAAGGTCTCCACAGCACCCTTTTAGT
GCTGATGAAGGCAGCAAATCTCATGTGGCTCATCATTGGCTCTTTGATTGACATTGTAAA
CTCTCTCCTCGAGATGTCCCAATGAAGGTCGTGTTTGCCCTTTGATTGACAAGCCAACAT
TTCTTTGTTTGGTTTGGCTTGAGTGAGCATAGCTCGGTTGTCTAGGCGTGGCATGAATAC
ATATCAGTCAAGGCACTTTAGACTCAGTTAGCAATGAGA
■■Homology search results ■■ -
sp_hit_id P20930
Definition sp|P20930|FILA_HUMAN Filaggrin OS=Homo sapiens
Align length 108
Score (bit) 29.6
E-value 9.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913098|Adiantum capillus-veneris mRNA, clone:
YMU001_000026_E01.
         (519 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P20930|FILA_HUMAN Filaggrin OS=Homo sapiens GN=FLG PE=1 SV=3        30   9.0  

>sp|P20930|FILA_HUMAN Filaggrin OS=Homo sapiens GN=FLG PE=1 SV=3
          Length = 4061

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 28/108 (25%), Positives = 41/108 (37%), Gaps = 8/108 (7%)
 Frame = +1

Query: 37   SSSHKPEARXQGRGSVLHQMSG-------VEHDGQSGSNSRRDVRRGSFILVE-DASSSS 192
            S SH      QGR    H  SG         ++ QSG  SR    R      + D+S  S
Sbjct: 3784 SGSHHSHTTSQGRSDASHGQSGSRSASRETRNEEQSGDGSRHSGSRHHEASTQADSSRHS 3843

Query: 193  PEGRY*TKGRVGTLKDDGLQEKSTSESARSPQHPFSADEGSKSHVAHH 336
              G    +G     +    Q  S S+ + S  +P  ++  S+S   +H
Sbjct: 3844 QSG----QGESAGSRRSRRQGSSVSQDSDSEAYPEDSERRSESASRNH 3887
tr_hit_id B4GES0
Definition tr|B4GES0|B4GES0_DROPE GL21749 OS=Drosophila persimilis
Align length 118
Score (bit) 33.9
E-value 5.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913098|Adiantum capillus-veneris mRNA, clone:
YMU001_000026_E01.
         (519 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4GES0|B4GES0_DROPE GL21749 OS=Drosophila persimilis GN=GL217...    34   5.0  
tr|Q5TS29|Q5TS29_ANOGA AGAP008752-PA (Fragment) OS=Anopheles gam...    33   6.5  
tr|B6LAA1|B6LAA1_BRAFL Putative uncharacterized protein OS=Branc...    33   6.5  
tr|Q4SD14|Q4SD14_TETNG Chromosome 14 SCAF14645, whole genome sho...    33   8.5  
tr|Q4DTW8|Q4DTW8_TRYCR Mucin-associated surface protein (MASP), ...    33   8.5  
tr|B4JU57|B4JU57_DROGR GH16553 OS=Drosophila grimshawi GN=GH1655...    33   8.5  
tr|Q5CXT7|Q5CXT7_CRYPV Ubiquitin ligase with a HECT domain at th...    33   8.5  

>tr|B4GES0|B4GES0_DROPE GL21749 OS=Drosophila persimilis GN=GL21749
            PE=4 SV=1
          Length = 1806

 Score = 33.9 bits (76), Expect = 5.0
 Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 4/118 (3%)
 Frame = -3

Query: 475  HATPRQPSYAHSSQTKQRNVGLSIKGQTRPSLGHLEERVYNVNQRANDEPHEICCLHQH* 296
            H+     S +HSS     + G S    T P+LG ++    N N  AN+   +        
Sbjct: 1669 HSHSHNNSSSHSSHGHSHSHGHSHSHSTTPTLGVMQR---NANANANNAADD-------- 1717

Query: 295  KGAVETLQTQRSTSLAIHHPSRYPPFPLFNTFLQVRRS----LHLQRV*KTLSSHLSY 134
             G +   Q+Q   + A  +P + PP  +FN   Q ++S     H  +    LSSH  +
Sbjct: 1718 -GKLYVGQSQEIGTKAHQYPLQPPPAQVFNNKEQKQKSHNRLYHQHKYSTRLSSHAQW 1774


>tr|Q5TS29|Q5TS29_ANOGA AGAP008752-PA (Fragment) OS=Anopheles gambiae
            GN=AGAP008752 PE=4 SV=3
          Length = 1108

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
 Frame = -1

Query: 276  CRLRGRLLLQSIILQGTHPSLCLIPSFR*GGACIFNEYERPSPHISPTVGTTLTIMFNSR 97
            CR  G +L+  + ++   P+ C   ++R G  C++   + P       V T  T   +SR
Sbjct: 734  CRTIGAVLIDGMCVRIEEPAPCPEGTYRHGRHCVYP--DAPECEDVQHVATQCTSEIDSR 791

Query: 96   -HLM*NTSPSLXPGFRLMGRACIIS*YERPS 7
             +    T+P+   G+RL    CI    E+P+
Sbjct: 792  GYCWQRTAPTCPQGYRLRDDRCIACQSEKPN 822


>tr|B6LAA1|B6LAA1_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_57357 PE=4 SV=1
          Length = 470

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 37/127 (29%), Positives = 53/127 (41%), Gaps = 9/127 (7%)
 Frame = +1

Query: 1   VRRGSFILADDASSSHKPEARXQ---GRGSVLHQMSGVEHDGQSGSNSRRDVRRGSFILV 171
           +RR S +L ++A   H P  R Q    RG +L Q  G     Q GS   R   + S  L 
Sbjct: 31  IRRRSQLLRENAKVDHDPIIRKQYLKVRGQILGQRYGTSLSEQ-GSQRSRSASKCSSRLT 89

Query: 172 EDASSSSPEG--RY*TKG----RVGTLKDDGLQEKSTSESARSPQHPFSADEGSKSHVAH 333
            D       G  RY + G     + +  +DGL     +E++R+     + DE       H
Sbjct: 90  LDREEGDFRGHRRYHSSGSGKFSLPSPTEDGLVPTRAAEASRAMVGDKTLDENYAFAGMH 149

Query: 334 HWLFD*H 354
           H +FD H
Sbjct: 150 H-IFDQH 155


>tr|Q4SD14|Q4SD14_TETNG Chromosome 14 SCAF14645, whole genome
           shotgun sequence. (Fragment) OS=Tetraodon nigroviridis
           GN=GSTENG00020239001 PE=4 SV=1
          Length = 843

 Score = 33.1 bits (74), Expect = 8.5
 Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = +1

Query: 148 RRGSFILVEDASSSSPEGRY*TKGRVGTLKDDGLQEKSTSESARSPQ-HPFSADEGSKSH 324
           RR S   ++  S +SP  R    GR+G+ +D G+     +E  ++P  HP SAD G K  
Sbjct: 660 RRRSSSEMQMCSEASPNSR----GRLGSTEDGGV---GRAEQPQTPSNHPTSADVGGKLP 712

Query: 325 VAHHWL 342
             +H+L
Sbjct: 713 GGYHYL 718


>tr|Q4DTW8|Q4DTW8_TRYCR Mucin-associated surface protein (MASP),
           putative OS=Trypanosoma cruzi GN=Tc00.1047053506973.20
           PE=4 SV=1
          Length = 478

 Score = 33.1 bits (74), Expect = 8.5
 Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 9/107 (8%)
 Frame = +1

Query: 22  LADDASSSHKPEARXQG---------RGSVLHQMSGVEHDGQSGSNSRRDVRRGSFILVE 174
           L  DA ++ K + R QG         +G V  +    + + Q      +  + G+     
Sbjct: 331 LVRDAEAAEKEKQREQGADGQNEKNEKGPVTRKEQREQEENQLPHQQEQQEKEGTL---- 386

Query: 175 DASSSSPEGRY*TKGRVGTLKDDGLQEKSTSESARSPQHPFSADEGS 315
              S+SP G   T+  + T++ +G+QE+   +  +  +HP  + E S
Sbjct: 387 ---SASPAGLETTQRSLSTVQPEGIQEELLQQQHQQHEHPAESGEES 430


>tr|B4JU57|B4JU57_DROGR GH16553 OS=Drosophila grimshawi GN=GH16553
           PE=4 SV=1
          Length = 962

 Score = 33.1 bits (74), Expect = 8.5
 Identities = 31/95 (32%), Positives = 40/95 (42%)
 Frame = +1

Query: 37  SSSHKPEARXQGRGSVLHQMSGVEHDGQSGSNSRRDVRRGSFILVEDASSSSPEGRY*TK 216
           SS+HK   R + R S        +H     S+S    R+         SSSS + R    
Sbjct: 205 SSTHKDSERSERRSSTN------KHKSSKSSSSSSSHRK---------SSSSDKHR---S 246

Query: 217 GRVGTLKDDGLQEKSTSESARSPQHPFSADEGSKS 321
            R  + KD G    STS S+RS QH  S+   S S
Sbjct: 247 ERSSSSKDKGSTSASTSSSSRSRQHSSSSSSKSTS 281


>tr|Q5CXT7|Q5CXT7_CRYPV Ubiquitin ligase with a HECT domain at the
            C-terminus OS=Cryptosporidium parvum Iowa II GN=cgd7_4990
            PE=4 SV=1
          Length = 6680

 Score = 33.1 bits (74), Expect = 8.5
 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 11/98 (11%)
 Frame = -3

Query: 403  KGQTRPSLGHLEERVYNVNQRANDEPHEICCLHQH*KGAVETLQTQRST----------- 257
            KG+  PSL HL++ VYN+N                 +GA++T  T               
Sbjct: 1730 KGENLPSLNHLQDHVYNLNV----------------EGAIDTEMTSSQVLDLYIHFIMNG 1773

Query: 256  SLAIHHPSRYPPFPLFNTFLQVRRSLHLQRV*KTLSSH 143
              +IH  ++     +F++FL++   + L+++ K  SSH
Sbjct: 1774 PTSIHDMNKVVKTEIFSSFLKL---MTLEQIYKITSSH 1808