BP913099
Clone id YMU001_000026_E02
Library
Length 506
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000026_E02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTTTTTTCAATATATCTTACCCTATCTTTTTAAACATGAAAATGCAATAATGGTAGGCA
AATCTCTCCTTAATGTTAGATGGCTTCAAGATGCCACCATATGCCACCATAGTGACCACA
TTGGGAGAGAAGCCATACAGCGTGCACTTTTCAATAACCTATGCAGCAATCAAGAGAGAG
AATCGATTTTGGATGGGCCCACAAATCCCATCTCTTTTGACACTTAACTCTGTACATGCC
AATTTCCTATTTCCCACATCTGACCCGCTACATGTTCTCCATCGATCTCCACCATATCCT
TTCTTATCCCATTCCTAATCTAACCCATCTTCTTAGGTTACCCTCAGTGGCTCTGGACAT
GCTGTCCTGGTGTTCGTGAGCCATCCATGTTTGCCACCCCTACCTATCGTTGCTCTACAA
GCTTTGTGCAGCCTCAAGGACCCCCAAAAATCATCTAAGCACATTCCCACATCAACATTT
GCTTCCATAGCCAGCCCATACCCCCG
■■Homology search results ■■ -
sp_hit_id Q8T2A1
Definition sp|Q8T2A1|COLB_DICDI Colossin-B OS=Dictyostelium discoideum
Align length 80
Score (bit) 35.8
E-value 0.12
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913099|Adiantum capillus-veneris mRNA, clone:
YMU001_000026_E02.
(506 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8T2A1|COLB_DICDI Colossin-B OS=Dictyostelium discoideum GN=c... 36 0.12
sp|Q8K2A8|ALG3_MOUSE Dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl ... 35 0.15
sp|Q92685|ALG3_HUMAN Dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl ... 33 0.58
sp|Q5FRZ1|MIAA_GLUOX tRNA delta(2)-isopentenylpyrophosphate tran... 32 1.7
sp|Q86XX4|FRAS1_HUMAN Extracellular matrix protein FRAS1 OS=Homo... 32 2.2
sp|Q8CGI1|CD008_MOUSE Uncharacterized protein C4orf8 homolog OS=... 31 2.9
sp|P09258|VGLI_VZVD Glycoprotein I OS=Varicella-zoster virus (st... 31 3.8
sp|P22373|DPOM_CLAPU Probable DNA polymerase OS=Claviceps purpur... 30 6.5
sp|Q99MZ6|MYO7B_MOUSE Myosin-VIIb OS=Mus musculus GN=Myo7b PE=1 ... 30 8.4
sp|P41389|MCM5_SCHPO DNA replication licensing factor mcm5 OS=Sc... 30 8.4
sp|Q8W3K3|DRL8_ARATH Putative disease resistance protein At1g584... 30 8.4

>sp|Q8T2A1|COLB_DICDI Colossin-B OS=Dictyostelium discoideum GN=colB
PE=3 SV=1
Length = 3763

Score = 35.8 bits (81), Expect = 0.12
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +1

Query: 7 FNISYPIFLNMKMQ*W*ANLSLMLDGFKMPPYATIVTTLGEKPY-SVHFSITYAAIKREN 183
+ I+ P+F N+ ++ + NL +LD F + T+ LG+ + ++H +
Sbjct: 2136 YEIAEPVFPNITVRLFDQNLQPVLDNFNIQVEPTVTNALGQYYFDNLHSGSYIVKFEVPT 2195

Query: 184 RFWMGPQIPSLLTLNSVHAN 243
R++ PQ+ S+ N V N
Sbjct: 2196 RYYFAPQLKSIENSNGVGVN 2215


>sp|Q8K2A8|ALG3_MOUSE Dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl
mannosyltransferase OS=Mus musculus GN=Alg3 PE=2 SV=1
Length = 438

Score = 35.4 bits (80), Expect = 0.15
Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 13/67 (19%)
Frame = +2

Query: 251 FPHLTRYMFSIDLHHILSY-----PIPNLTHLLRLPSVALDMLSW--------CS*AIHV 391
F H Y F + H L Y P LTHLLRL + L LSW S A+H+
Sbjct: 352 FSHSLHYQFYVWYFHTLPYLLWAMPARWLTHLLRLLVLGLIELSWNTYPSTSFSSAALHL 411

Query: 392 CHPYLSL 412
CH + L
Sbjct: 412 CHAVVLL 418


>sp|Q92685|ALG3_HUMAN Dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl
mannosyltransferase OS=Homo sapiens GN=ALG3 PE=1 SV=1
Length = 438

Score = 33.5 bits (75), Expect = 0.58
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 13/67 (19%)
Frame = +2

Query: 251 FPHLTRYMFSIDLHHILSY-----PIPNLTHLLRLPSVALDMLSW--------CS*AIHV 391
F Y F + H L Y P LTHLLRL + L LSW S A+H+
Sbjct: 352 FSRSLHYQFYVWYFHTLPYLLWAMPARWLTHLLRLLVLGLIELSWNTYPSTSCSSAALHI 411

Query: 392 CHPYLSL 412
CH + L
Sbjct: 412 CHAVILL 418


>sp|Q5FRZ1|MIAA_GLUOX tRNA delta(2)-isopentenylpyrophosphate
transferase OS=Gluconobacter oxydans GN=miaA PE=3 SV=1
Length = 332

Score = 32.0 bits (71), Expect = 1.7
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = -1

Query: 311 WDKKGYGGDRWRTCSGSDVGNRKLACTELSVKRDGICGPIQNRFSLLIAA*VIEKCTLY- 135
W G+G WR+ G + + +L +R+G+ I +RF ++ A +E+ +
Sbjct: 175 WTGTGHGLAWWRSQPGLPPASCRFVSVQLDPEREGLRRAIDSRFGQMLEAGALEEVSALL 234

Query: 134 --GFSPNVVTMVAYG 96
G P + M A+G
Sbjct: 235 ERGLDPVLPAMRAHG 249


>sp|Q86XX4|FRAS1_HUMAN Extracellular matrix protein FRAS1 OS=Homo
sapiens GN=FRAS1 PE=2 SV=1
Length = 4007

Score = 31.6 bits (70), Expect = 2.2
Identities = 27/84 (32%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
Frame = -1

Query: 428 HKACRATIGRGGKHGWLTNTRTACPEPLRVT*EDGLD*EWDKKGYGGDRWRTCSGSDVG- 252
H++C G KH AC +PL V + G + K Y +R TCS D
Sbjct: 514 HESCAGCWGPTEKHC------LACRDPLHVLRDGGCESSCGKGFY--NRQGTCSACDQSC 565

Query: 251 -------NRKLACTELSVKRDGIC 201
R L CTE +V DG C
Sbjct: 566 DSCGPSSPRCLTCTEKTVLHDGKC 589


>sp|Q8CGI1|CD008_MOUSE Uncharacterized protein C4orf8 homolog OS=Mus
musculus PE=2 SV=2
Length = 1231

Score = 31.2 bits (69), Expect = 2.9
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +2

Query: 209 HLF*HLTLYMPISYFPHLTRYMFSIDLHHILSYPIPNLTHLLRLP 343
HL+ H+ ++P+ PHL R L H YP P TH LP
Sbjct: 450 HLYPHIHGHVPLHTVPHLPR-----PLIHPTLYPAPPFTHSKALP 489


>sp|P09258|VGLI_VZVD Glycoprotein I OS=Varicella-zoster virus
(strain Dumas) GN=67 PE=1 SV=1
Length = 354

Score = 30.8 bits (68), Expect = 3.8
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +3

Query: 27 LFKHENAIMVGKSLLNVRWLQDATICHHSDHIGREAIQRALFNNLCSNQERESILDGPTN 206
LF+H + GKSL + WL + + + + +E I+ ++ S +S+ D P N
Sbjct: 213 LFQHMLDLRAGKSLEDNPWLHEDVVTTETKSVVKEGIENHVYPTDMSTLPEKSLNDPPEN 272


>sp|P22373|DPOM_CLAPU Probable DNA polymerase OS=Claviceps purpurea
PE=3 SV=1
Length = 1063

Score = 30.0 bits (66), Expect = 6.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2

Query: 239 PISYFPHLTRYMFSIDLHHILSYPIPNLTHLLRLP 343
P SYFP Y+FS+D H + PN+ + L +P
Sbjct: 527 PKSYFP----YLFSVDSHLFYTGATPNINYYLDIP 557


>sp|Q99MZ6|MYO7B_MOUSE Myosin-VIIb OS=Mus musculus GN=Myo7b PE=1
SV=2
Length = 2113

Score = 29.6 bits (65), Expect = 8.4
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +1

Query: 109 IVTTLGEKPYSVHFSITYAAIKRENRFWMGPQIPSLLTLNSVHAN---FLFPTS 261
I+ L KP S+ + + E+RF G + L LNS+HAN FL P S
Sbjct: 495 ILDMLALKPMSI-----ISLLDEESRFPQGTDVTMLQKLNSIHANNKSFLSPRS 543


>sp|P41389|MCM5_SCHPO DNA replication licensing factor mcm5
OS=Schizosaccharomyces pombe GN=mcm5 PE=1 SV=2
Length = 720

Score = 29.6 bits (65), Expect = 8.4
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Frame = +2

Query: 122 WERSHTACTFQ*PMQQSRERIDFGWAHKSHLF*HLTLYMPISYFPHLTR---------YM 274
WERS T P+ + +D +H+ + + ++ + F + T+ YM
Sbjct: 7 WERSAVYYT---PVLPGEQELDSNVSHEKNFIQFIEEFVIDNDFIYRTQLRDNLVVKQYM 63

Query: 275 FSIDLHHILSYPIPNLTHLL 334
+IDL H++SY +L HLL
Sbjct: 64 LNIDLRHLISYN-EDLAHLL 82


tr_hit_id Q1H2J0
Definition tr|Q1H2J0|Q1H2J0_METFK Endonuclease/exonuclease/phosphatase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875)
Align length 71
Score (bit) 34.3
E-value 3.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913099|Adiantum capillus-veneris mRNA, clone:
YMU001_000026_E02.
(506 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q1H2J0|Q1H2J0_METFK Endonuclease/exonuclease/phosphatase OS=M... 34 3.5
tr|A7T2J4|A7T2J4_NEMVE Predicted protein (Fragment) OS=Nematoste... 34 4.6
tr|B4DS50|B4DS50_HUMAN cDNA FLJ50188, highly similar to Dolichyl... 33 6.0
tr|A8JZZ6|A8JZZ6_HUMAN cDNA FLJ76198, highly similar to Homo sap... 33 6.0
tr|A4FV21|A4FV21_BOVIN ALG3 protein OS=Bos taurus GN=ALG3 PE=2 SV=1 33 7.8
tr|Q0CCM6|Q0CCM6_ASPTN Putative uncharacterized protein OS=Asper... 33 7.8

>tr|Q1H2J0|Q1H2J0_METFK Endonuclease/exonuclease/phosphatase
OS=Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875) GN=Mfla_0885 PE=4 SV=1
Length = 365

Score = 34.3 bits (77), Expect = 3.5
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = +1

Query: 94 PPYATIVTTLGEKPYSVHFSITYAAIKRENRFWMGPQIPSLLTLNSVHANFLFPTSDP-- 267
P Y +V + Y +H E +F + P+IP S+HA + P P
Sbjct: 150 PEYPYVVRAPMDNLYGMHLYSRLPLRDAEVKFLLSPEIP------SIHATVMLPCGAPVK 203

Query: 268 LHVLHRSPPYP 300
L+ LH PP P
Sbjct: 204 LYCLHPEPPSP 214


>tr|A7T2J4|A7T2J4_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g143196 PE=4 SV=1
Length = 97

Score = 33.9 bits (76), Expect = 4.6
Identities = 29/100 (29%), Positives = 40/100 (40%)
Frame = +2

Query: 200 HKSHLF*HLTLYMPISYFPHLTRYMFSIDLHHILSYPIPNLTHLLRLPSVALDMLSWCS* 379
HK H + PI+Y +M + H YPI TH+ PS +
Sbjct: 7 HKCHPY-------PITYVTLTPSHMSPLPHHKCHPYPI---THVTLFPSEMSPL------ 50

Query: 380 AIHVCHPYLSLLYKLCAASRTPKNHLSTFPHQHLLP*PAH 499
H CHP + A+ TP +H+S PH P P+H
Sbjct: 51 PYHKCHPS-----PITNATLTP-SHMSPLPHHKCHPYPSH 84


>tr|B4DS50|B4DS50_HUMAN cDNA FLJ50188, highly similar to
Dolichyl-P-Man:Man(5)GlcNAc(2)-PP-
dolichylmannosyltransferase (EC 2.4.1.-) OS=Homo sapiens
PE=2 SV=1
Length = 382

Score = 33.5 bits (75), Expect = 6.0
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 13/67 (19%)
Frame = +2

Query: 251 FPHLTRYMFSIDLHHILSY-----PIPNLTHLLRLPSVALDMLSW--------CS*AIHV 391
F Y F + H L Y P LTHLLRL + L LSW S A+H+
Sbjct: 296 FSRSLHYQFYVWYFHTLPYLLWAMPARWLTHLLRLLVLGLIELSWNTYPSTSCSSAALHI 355

Query: 392 CHPYLSL 412
CH + L
Sbjct: 356 CHAVILL 362


>tr|A8JZZ6|A8JZZ6_HUMAN cDNA FLJ76198, highly similar to Homo
sapiens asparagine-linked glycosylation 3 homolog
(yeast, alpha-1,3-mannosyltransferase) (ALG3),
transcript variant 4, mRNA OS=Homo sapiens PE=2 SV=1
Length = 390

Score = 33.5 bits (75), Expect = 6.0
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 13/67 (19%)
Frame = +2

Query: 251 FPHLTRYMFSIDLHHILSY-----PIPNLTHLLRLPSVALDMLSW--------CS*AIHV 391
F Y F + H L Y P LTHLLRL + L LSW S A+H+
Sbjct: 304 FSRSLHYQFYVWYFHTLPYLLWAMPARWLTHLLRLLVLGLIELSWNTYPSTSCSSAALHI 363

Query: 392 CHPYLSL 412
CH + L
Sbjct: 364 CHAVILL 370


>tr|A4FV21|A4FV21_BOVIN ALG3 protein OS=Bos taurus GN=ALG3 PE=2 SV=1
Length = 438

Score = 33.1 bits (74), Expect = 7.8
Identities = 29/87 (33%), Positives = 34/87 (39%), Gaps = 13/87 (14%)
Frame = +2

Query: 251 FPHLTRYMFSIDLHHILSY-----PIPNLTHLLRLPSVALDMLSW--------CS*AIHV 391
F Y F + H L Y P LTHLLRL + L LSW S A+H
Sbjct: 352 FSRSLHYQFYVWYFHTLPYLLWATPARWLTHLLRLLVLGLIELSWNTYPSTSCSSAALHA 411

Query: 392 CHPYLSLLYKLCAASRTPKNHLSTFPH 472
CH + L L P+ T PH
Sbjct: 412 CHAVILLQLWL-----GPQPFPKTIPH 433


>tr|Q0CCM6|Q0CCM6_ASPTN Putative uncharacterized protein
OS=Aspergillus terreus (strain NIH 2624) GN=ATEG_08558
PE=4 SV=1
Length = 723

Score = 33.1 bits (74), Expect = 7.8
Identities = 16/62 (25%), Positives = 36/62 (58%)
Frame = +3

Query: 9 QYILPYLFKHENAIMVGKSLLNVRWLQDATICHHSDHIGREAIQRALFNNLCSNQERESI 188
Q++ PY+F +++ + ++ N ++D H ++H+ + R L NNL + +E+++
Sbjct: 247 QHLAPYVFDYQDVLYGARTTSNAVPMRDILAAHATNHV-LKTRDRVLKNNLRAAKEQDAD 305

Query: 189 LD 194
LD
Sbjct: 306 LD 307