BP913099 |
Clone id |
YMU001_000026_E02 |
Library |
YMU01 |
Length |
506 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000026_E02. |
Accession |
BP913099 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TTTTTTTTCAATATATCTTACCCTATCTTTTTAAACATGAAAATGCAATAATGGTAGGCA AATCTCTCCTTAATGTTAGATGGCTTCAAGATGCCACCATATGCCACCATAGTGACCACA TTGGGAGAGAAGCCATACAGCGTGCACTTTTCAATAACCTATGCAGCAATCAAGAGAGAG AATCGATTTTGGATGGGCCCACAAATCCCATCTCTTTTGACACTTAACTCTGTACATGCC AATTTCCTATTTCCCACATCTGACCCGCTACATGTTCTCCATCGATCTCCACCATATCCT TTCTTATCCCATTCCTAATCTAACCCATCTTCTTAGGTTACCCTCAGTGGCTCTGGACAT GCTGTCCTGGTGTTCGTGAGCCATCCATGTTTGCCACCCCTACCTATCGTTGCTCTACAA GCTTTGTGCAGCCTCAAGGACCCCCAAAAATCATCTAAGCACATTCCCACATCAACATTT GCTTCCATAGCCAGCCCATACCCCCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8T2A1 |
Definition |
sp|Q8T2A1|COLB_DICDI Colossin-B OS=Dictyostelium discoideum |
Align length |
80 |
Score (bit) |
35.8 |
E-value |
0.12 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913099|Adiantum capillus-veneris mRNA, clone: YMU001_000026_E02. (506 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q8T2A1|COLB_DICDI Colossin-B OS=Dictyostelium discoideum GN=c... 36 0.12 sp|Q8K2A8|ALG3_MOUSE Dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl ... 35 0.15 sp|Q92685|ALG3_HUMAN Dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl ... 33 0.58 sp|Q5FRZ1|MIAA_GLUOX tRNA delta(2)-isopentenylpyrophosphate tran... 32 1.7 sp|Q86XX4|FRAS1_HUMAN Extracellular matrix protein FRAS1 OS=Homo... 32 2.2 sp|Q8CGI1|CD008_MOUSE Uncharacterized protein C4orf8 homolog OS=... 31 2.9 sp|P09258|VGLI_VZVD Glycoprotein I OS=Varicella-zoster virus (st... 31 3.8 sp|P22373|DPOM_CLAPU Probable DNA polymerase OS=Claviceps purpur... 30 6.5 sp|Q99MZ6|MYO7B_MOUSE Myosin-VIIb OS=Mus musculus GN=Myo7b PE=1 ... 30 8.4 sp|P41389|MCM5_SCHPO DNA replication licensing factor mcm5 OS=Sc... 30 8.4 sp|Q8W3K3|DRL8_ARATH Putative disease resistance protein At1g584... 30 8.4
>sp|Q8T2A1|COLB_DICDI Colossin-B OS=Dictyostelium discoideum GN=colB PE=3 SV=1 Length = 3763
Score = 35.8 bits (81), Expect = 0.12 Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 1/80 (1%) Frame = +1
Query: 7 FNISYPIFLNMKMQ*W*ANLSLMLDGFKMPPYATIVTTLGEKPY-SVHFSITYAAIKREN 183 + I+ P+F N+ ++ + NL +LD F + T+ LG+ + ++H + Sbjct: 2136 YEIAEPVFPNITVRLFDQNLQPVLDNFNIQVEPTVTNALGQYYFDNLHSGSYIVKFEVPT 2195
Query: 184 RFWMGPQIPSLLTLNSVHAN 243 R++ PQ+ S+ N V N Sbjct: 2196 RYYFAPQLKSIENSNGVGVN 2215
>sp|Q8K2A8|ALG3_MOUSE Dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl mannosyltransferase OS=Mus musculus GN=Alg3 PE=2 SV=1 Length = 438
Score = 35.4 bits (80), Expect = 0.15 Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 13/67 (19%) Frame = +2
Query: 251 FPHLTRYMFSIDLHHILSY-----PIPNLTHLLRLPSVALDMLSW--------CS*AIHV 391 F H Y F + H L Y P LTHLLRL + L LSW S A+H+ Sbjct: 352 FSHSLHYQFYVWYFHTLPYLLWAMPARWLTHLLRLLVLGLIELSWNTYPSTSFSSAALHL 411
Query: 392 CHPYLSL 412 CH + L Sbjct: 412 CHAVVLL 418
>sp|Q92685|ALG3_HUMAN Dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl mannosyltransferase OS=Homo sapiens GN=ALG3 PE=1 SV=1 Length = 438
Score = 33.5 bits (75), Expect = 0.58 Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 13/67 (19%) Frame = +2
Query: 251 FPHLTRYMFSIDLHHILSY-----PIPNLTHLLRLPSVALDMLSW--------CS*AIHV 391 F Y F + H L Y P LTHLLRL + L LSW S A+H+ Sbjct: 352 FSRSLHYQFYVWYFHTLPYLLWAMPARWLTHLLRLLVLGLIELSWNTYPSTSCSSAALHI 411
Query: 392 CHPYLSL 412 CH + L Sbjct: 412 CHAVILL 418
>sp|Q5FRZ1|MIAA_GLUOX tRNA delta(2)-isopentenylpyrophosphate transferase OS=Gluconobacter oxydans GN=miaA PE=3 SV=1 Length = 332
Score = 32.0 bits (71), Expect = 1.7 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 3/75 (4%) Frame = -1
Query: 311 WDKKGYGGDRWRTCSGSDVGNRKLACTELSVKRDGICGPIQNRFSLLIAA*VIEKCTLY- 135 W G+G WR+ G + + +L +R+G+ I +RF ++ A +E+ + Sbjct: 175 WTGTGHGLAWWRSQPGLPPASCRFVSVQLDPEREGLRRAIDSRFGQMLEAGALEEVSALL 234
Query: 134 --GFSPNVVTMVAYG 96 G P + M A+G Sbjct: 235 ERGLDPVLPAMRAHG 249
>sp|Q86XX4|FRAS1_HUMAN Extracellular matrix protein FRAS1 OS=Homo sapiens GN=FRAS1 PE=2 SV=1 Length = 4007
Score = 31.6 bits (70), Expect = 2.2 Identities = 27/84 (32%), Positives = 34/84 (40%), Gaps = 8/84 (9%) Frame = -1
Query: 428 HKACRATIGRGGKHGWLTNTRTACPEPLRVT*EDGLD*EWDKKGYGGDRWRTCSGSDVG- 252 H++C G KH AC +PL V + G + K Y +R TCS D Sbjct: 514 HESCAGCWGPTEKHC------LACRDPLHVLRDGGCESSCGKGFY--NRQGTCSACDQSC 565
Query: 251 -------NRKLACTELSVKRDGIC 201 R L CTE +V DG C Sbjct: 566 DSCGPSSPRCLTCTEKTVLHDGKC 589
>sp|Q8CGI1|CD008_MOUSE Uncharacterized protein C4orf8 homolog OS=Mus musculus PE=2 SV=2 Length = 1231
Score = 31.2 bits (69), Expect = 2.9 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +2
Query: 209 HLF*HLTLYMPISYFPHLTRYMFSIDLHHILSYPIPNLTHLLRLP 343 HL+ H+ ++P+ PHL R L H YP P TH LP Sbjct: 450 HLYPHIHGHVPLHTVPHLPR-----PLIHPTLYPAPPFTHSKALP 489
>sp|P09258|VGLI_VZVD Glycoprotein I OS=Varicella-zoster virus (strain Dumas) GN=67 PE=1 SV=1 Length = 354
Score = 30.8 bits (68), Expect = 3.8 Identities = 16/60 (26%), Positives = 29/60 (48%) Frame = +3
Query: 27 LFKHENAIMVGKSLLNVRWLQDATICHHSDHIGREAIQRALFNNLCSNQERESILDGPTN 206 LF+H + GKSL + WL + + + + +E I+ ++ S +S+ D P N Sbjct: 213 LFQHMLDLRAGKSLEDNPWLHEDVVTTETKSVVKEGIENHVYPTDMSTLPEKSLNDPPEN 272
>sp|P22373|DPOM_CLAPU Probable DNA polymerase OS=Claviceps purpurea PE=3 SV=1 Length = 1063
Score = 30.0 bits (66), Expect = 6.5 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = +2
Query: 239 PISYFPHLTRYMFSIDLHHILSYPIPNLTHLLRLP 343 P SYFP Y+FS+D H + PN+ + L +P Sbjct: 527 PKSYFP----YLFSVDSHLFYTGATPNINYYLDIP 557
>sp|Q99MZ6|MYO7B_MOUSE Myosin-VIIb OS=Mus musculus GN=Myo7b PE=1 SV=2 Length = 2113
Score = 29.6 bits (65), Expect = 8.4 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%) Frame = +1
Query: 109 IVTTLGEKPYSVHFSITYAAIKRENRFWMGPQIPSLLTLNSVHAN---FLFPTS 261 I+ L KP S+ + + E+RF G + L LNS+HAN FL P S Sbjct: 495 ILDMLALKPMSI-----ISLLDEESRFPQGTDVTMLQKLNSIHANNKSFLSPRS 543
>sp|P41389|MCM5_SCHPO DNA replication licensing factor mcm5 OS=Schizosaccharomyces pombe GN=mcm5 PE=1 SV=2 Length = 720
Score = 29.6 bits (65), Expect = 8.4 Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 9/80 (11%) Frame = +2
Query: 122 WERSHTACTFQ*PMQQSRERIDFGWAHKSHLF*HLTLYMPISYFPHLTR---------YM 274 WERS T P+ + +D +H+ + + ++ + F + T+ YM Sbjct: 7 WERSAVYYT---PVLPGEQELDSNVSHEKNFIQFIEEFVIDNDFIYRTQLRDNLVVKQYM 63
Query: 275 FSIDLHHILSYPIPNLTHLL 334 +IDL H++SY +L HLL Sbjct: 64 LNIDLRHLISYN-EDLAHLL 82
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q1H2J0 |
Definition |
tr|Q1H2J0|Q1H2J0_METFK Endonuclease/exonuclease/phosphatase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) |
Align length |
71 |
Score (bit) |
34.3 |
E-value |
3.5 |
Report |
|