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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913106
Clone id YMU001_000026_E09
Library
Length 356
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000026_E09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GCCTCACCCTCAAAACCACATCCACATGGTTATAATTAAATGTGAAAGGAACGTAGAACA
ACCATCCTGTAGTTGGAGAATTTTTTCATGTCCTTTCTGAAACCAAACAACGGTGTCACA
CTTGAACCATATACCATGCATGTAGATCCCATTTTTGGTAATCTTAGCAAGCACTTCGTG
CTCTACCATAAATCCCAACAGGCACAAATTGGGATTTACCTTTCTCACCTCCCGCGTGAT
TGCATTCCCCGATTCTAGCGCACGTATGGAGTCCTTCTCTTGTCCTAGCATTGCTTGTAC
AAGGATGTCCGTGAAAACACCACAGACACAATGCCCGCTGGAACCATGATCGCGAT
■■Homology search results ■■ -
sp_hit_id Q9I6D1
Definition sp|Q9I6D1|COAD_PSEAE Phosphopantetheine adenylyltransferase OS=Pseudomonas aeruginosa
Align length 104
Score (bit) 32.0
E-value 1.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913106|Adiantum capillus-veneris mRNA, clone:
YMU001_000026_E09.
         (356 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9I6D1|COAD_PSEAE Phosphopantetheine adenylyltransferase OS=P...    32   1.0  
sp|Q02U51|COAD_PSEAB Phosphopantetheine adenylyltransferase OS=P...    32   1.0  
sp|B0KN77|COAD_PSEPG Phosphopantetheine adenylyltransferase OS=P...    32   1.3  
sp|Q4ZM37|COAD_PSEU2 Phosphopantetheine adenylyltransferase OS=P...    31   2.2  
sp|Q88AH3|COAD_PSESM Phosphopantetheine adenylyltransferase OS=P...    31   2.2  
sp|Q3K569|COAD_PSEPF Phosphopantetheine adenylyltransferase OS=P...    31   2.2  
sp|Q4K4A7|COAD_PSEF5 Phosphopantetheine adenylyltransferase OS=P...    31   2.2  
sp|O81016|PDR4_ARATH Probable pleiotropic drug resistance protei...    30   5.0  
sp|Q05001|NCPR_CATRO NADPH--cytochrome P450 reductase OS=Cathara...    30   5.0  
sp|O26641|MRE11_METTH DNA double-strand break repair protein mre...    30   5.0  
sp|Q88CQ7|COAD_PSEPK Phosphopantetheine adenylyltransferase OS=P...    30   5.0  
sp|A5WAF7|COAD_PSEP1 Phosphopantetheine adenylyltransferase OS=P...    30   5.0  
sp|Q1IGF0|COAD_PSEE4 Phosphopantetheine adenylyltransferase OS=P...    30   5.0  
sp|Q3TKR3|NAL4C_MOUSE NACHT, LRR and PYD domains-containing prot...    29   6.5  
sp|A8MF65|HUTI_ALKOO Imidazolonepropionase OS=Alkaliphilus oreml...    29   6.5  
sp|A6BM72|MEG11_HUMAN Multiple epidermal growth factor-like doma...    29   8.5  
sp|Q89PS5|DDLB_BRAJA D-alanine--D-alanine ligase B OS=Bradyrhizo...    29   8.5  

>sp|Q9I6D1|COAD_PSEAE Phosphopantetheine adenylyltransferase
           OS=Pseudomonas aeruginosa GN=coaD PE=3 SV=1
          Length = 159

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 24/104 (23%), Positives = 44/104 (42%)
 Frame = -3

Query: 354 RDHGSSGHCVCGVFTDILVQAMLGQEKDSIRALESGNAITREVRKVNPNLCLLGFMVEHE 175
           + HG        +F  +++      +K+ + +LE   A+ +EV K  PN+ ++GF     
Sbjct: 15  KGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEVTKHLPNVEVVGFSTLLA 74

Query: 174 VLAKITKNGIYMHGIWFKCDTVVWFQKGHEKILQLQDGCSTFLS 43
              K  K  +++ G+    D    FQ  +       D  S FL+
Sbjct: 75  HFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFLT 118


>sp|Q02U51|COAD_PSEAB Phosphopantetheine adenylyltransferase
           OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=coaD
           PE=3 SV=1
          Length = 159

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 24/104 (23%), Positives = 44/104 (42%)
 Frame = -3

Query: 354 RDHGSSGHCVCGVFTDILVQAMLGQEKDSIRALESGNAITREVRKVNPNLCLLGFMVEHE 175
           + HG        +F  +++      +K+ + +LE   A+ +EV K  PN+ ++GF     
Sbjct: 15  KGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEVTKHLPNVEVVGFSTLLA 74

Query: 174 VLAKITKNGIYMHGIWFKCDTVVWFQKGHEKILQLQDGCSTFLS 43
              K  K  +++ G+    D    FQ  +       D  S FL+
Sbjct: 75  HFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFLT 118


>sp|B0KN77|COAD_PSEPG Phosphopantetheine adenylyltransferase
           OS=Pseudomonas putida (strain GB-1) GN=coaD PE=3 SV=1
          Length = 159

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 25/104 (24%), Positives = 43/104 (41%)
 Frame = -3

Query: 354 RDHGSSGHCVCGVFTDILVQAMLGQEKDSIRALESGNAITREVRKVNPNLCLLGFMVEHE 175
           + HG        +F  +++      +K+ +  LE   A+ REV K  PN+ ++GF     
Sbjct: 15  KGHGDLVERASRLFDHVIIAVAASPKKNPLFPLEQRVALAREVTKHLPNVEVIGFSSLLA 74

Query: 174 VLAKITKNGIYMHGIWFKCDTVVWFQKGHEKILQLQDGCSTFLS 43
             AK     +++ G+    D    FQ  +       D  S FL+
Sbjct: 75  HFAKEQGANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESLFLT 118


>sp|Q4ZM37|COAD_PSEU2 Phosphopantetheine adenylyltransferase
           OS=Pseudomonas syringae pv. syringae (strain B728a)
           GN=coaD PE=3 SV=1
          Length = 159

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 24/104 (23%), Positives = 42/104 (40%)
 Frame = -3

Query: 354 RDHGSSGHCVCGVFTDILVQAMLGQEKDSIRALESGNAITREVRKVNPNLCLLGFMVEHE 175
           + HG        +F  +++      +K+ +  LE    + REV K  PN+ ++GF     
Sbjct: 15  KGHGDLVERASRLFDQVVIAVAASPKKNPLFPLEQRVELAREVTKHLPNVEVVGFSTLLA 74

Query: 174 VLAKITKNGIYMHGIWFKCDTVVWFQKGHEKILQLQDGCSTFLS 43
             AK     +++ G+    D    FQ  +       D  S FL+
Sbjct: 75  HFAKEQNANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESLFLT 118


>sp|Q88AH3|COAD_PSESM Phosphopantetheine adenylyltransferase
           OS=Pseudomonas syringae pv. tomato GN=coaD PE=3 SV=1
          Length = 159

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 24/104 (23%), Positives = 42/104 (40%)
 Frame = -3

Query: 354 RDHGSSGHCVCGVFTDILVQAMLGQEKDSIRALESGNAITREVRKVNPNLCLLGFMVEHE 175
           + HG        +F  +++      +K+ +  LE    + REV K  PN+ ++GF     
Sbjct: 15  KGHGDLVERASRLFDQVVIAVAASPKKNPLFPLEQRVELAREVTKHLPNVEVVGFSTLLA 74

Query: 174 VLAKITKNGIYMHGIWFKCDTVVWFQKGHEKILQLQDGCSTFLS 43
             AK     +++ G+    D    FQ  +       D  S FL+
Sbjct: 75  HFAKEQNANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESLFLT 118


>sp|Q3K569|COAD_PSEPF Phosphopantetheine adenylyltransferase
           OS=Pseudomonas fluorescens (strain Pf0-1) GN=coaD PE=3
           SV=1
          Length = 159

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 24/104 (23%), Positives = 42/104 (40%)
 Frame = -3

Query: 354 RDHGSSGHCVCGVFTDILVQAMLGQEKDSIRALESGNAITREVRKVNPNLCLLGFMVEHE 175
           + HG        +F  +++      +K+ +  LE    + REV K  PN+ ++GF     
Sbjct: 15  KGHGDLVERASRLFDHVIIAVAASPKKNPLFPLEQRVELAREVTKHLPNVEVVGFSTLLA 74

Query: 174 VLAKITKNGIYMHGIWFKCDTVVWFQKGHEKILQLQDGCSTFLS 43
             AK     +++ G+    D    FQ  +       D  S FL+
Sbjct: 75  HFAKEQNANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESLFLT 118


>sp|Q4K4A7|COAD_PSEF5 Phosphopantetheine adenylyltransferase
           OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)
           GN=coaD PE=3 SV=1
          Length = 159

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 24/104 (23%), Positives = 42/104 (40%)
 Frame = -3

Query: 354 RDHGSSGHCVCGVFTDILVQAMLGQEKDSIRALESGNAITREVRKVNPNLCLLGFMVEHE 175
           + HG        +F  +++      +K+ +  LE    + REV K  PN+ ++GF     
Sbjct: 15  KGHGDLVERASRLFDHVIIAVAASPKKNPLFPLEQRVELAREVTKHLPNVEVVGFSTLLA 74

Query: 174 VLAKITKNGIYMHGIWFKCDTVVWFQKGHEKILQLQDGCSTFLS 43
             AK     +++ G+    D    FQ  +       D  S FL+
Sbjct: 75  HFAKEQNANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESLFLT 118


>sp|O81016|PDR4_ARATH Probable pleiotropic drug resistance protein 4
           OS=Arabidopsis thaliana GN=PDR4 PE=2 SV=1
          Length = 1420

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = +1

Query: 91  SFLKPNNGVTLEPYTMHVDPIFGNLSKHFVLYHKSQQAQIGIY 219
           S ++    V +  YT+  DP+F    + F+LY    Q  +G++
Sbjct: 595 SIIESATWVAVTYYTIGYDPLFSRFLQQFLLYFSLHQMSLGLF 637


>sp|Q05001|NCPR_CATRO NADPH--cytochrome P450 reductase
           OS=Catharanthus roseus GN=CPR PE=2 SV=1
          Length = 714

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -2

Query: 307 HPCTSNARTREGLHTCARIGECNH 236
           HPC SN   R+ LHT A    C H
Sbjct: 313 HPCRSNVAVRKELHTPASDRSCTH 336


>sp|O26641|MRE11_METTH DNA double-strand break repair protein mre11
           OS=Methanobacterium thermoautotrophicum GN=mre11 PE=3
           SV=1
          Length = 587

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
 Frame = -3

Query: 267 IRALESGNAITREVRKVNPNLCLLGFMVEHEVLAKITKNGIYMHGIWFKCDTV--VWFQK 94
           I  LES   I + VR +      L F V+ +  AKIT       G+  +  T+   +F K
Sbjct: 263 IDILESAGVIDKVVRPIPGKKLGLEFTVDEKTGAKIT-------GLSGRSRTLEAEYFMK 315

Query: 93  GHEKILQLQDGCSTFLSHLIITMW 22
              + L+ +DG   FL H  IT +
Sbjct: 316 LDREALEAEDGFRIFLFHSAITQF 339
tr_hit_id B8LTH2
Definition tr|B8LTH2|B8LTH2_9EURO Putative uncharacterized protein OS=Talaromyces stipitatus ATCC 10500
Align length 68
Score (bit) 36.6
E-value 0.65
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913106|Adiantum capillus-veneris mRNA, clone:
YMU001_000026_E09.
         (356 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LTH2|B8LTH2_9EURO Putative uncharacterized protein OS=Talar...    37   0.65 

>tr|B8LTH2|B8LTH2_9EURO Putative uncharacterized protein
           OS=Talaromyces stipitatus ATCC 10500 GN=TSTA_065100 PE=4
           SV=1
          Length = 509

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 19/68 (27%), Positives = 31/68 (45%)
 Frame = -3

Query: 336 GHCVCGVFTDILVQAMLGQEKDSIRALESGNAITREVRKVNPNLCLLGFMVEHEVLAKIT 157
           G CVCGV  D   QA+   +          + +   +R    N C+ GF++E  V+A + 
Sbjct: 251 GGCVCGVARDAWAQALRNLDDLGFNV----DYVISSMRNHASNPCMFGFLIEQGVIATVL 306

Query: 156 KNGIYMHG 133
             G+ + G
Sbjct: 307 NTGLPLEG 314