BP913111 |
Clone id |
YMU001_000026_F02 |
Library |
YMU01 |
Length |
552 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000026_F02. |
Accession |
BP913111 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GTAAACTGGATCTAGCCAAGCAGCTTCTGGAAGAGTTTTGTATGGGTCAATTTAGGAATT GCACAAGAATGTGGGCCATGAGAATTGTGTTAGAAATAAAGTCAGAAGTGGTAGCTGAAT TTTCCTTAATAAGAATTGCAGACCTGTTCGAGCAAGCTCTCAAGCATATATCGAGCGCTG AAGCTGGAGAGCTATGGGCTTTGGTGCTAGAGTATTCTGGAGGGCAAATTATCATCTACG ATCTCATTGTAGACATAATGCTCAACAAATTAGCTAGTTCTGAAGATCAAACTTCTGCAT TGCTGGCGTGCTCTTTGATCGATTGGTCATTTTGCAACCAAGATATCAAACATACTCGAA GTGTTTATGACAGGTAAGAGATAAGAGACATCTTAAACTCATTGTCTCACGAATAAATGT TTGTTGGGTTAAGTCTCCTTCAAACCTGTGAACTATTAGCAACGATCGTCTCAGGTAAGG GTAAACTTGGGGTCCTTGAGACTGAACAAATTGATGTTTTACAATTTCAATATCTGCTAG GCAAAGACATCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9NYH9 |
Definition |
sp|Q9NYH9|UTP6_HUMAN U3 small nucleolar RNA-associated protein 6 homolog OS=Homo sapiens |
Align length |
106 |
Score (bit) |
33.5 |
E-value |
0.7 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7R051 |
Definition |
tr|A7R051|A7R051_VITVI Chromosome chr10 scaffold_297, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
130 |
Score (bit) |
59.3 |
E-value |
1.0e-07 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913111|Adiantum capillus-veneris mRNA, clone: YMU001_000026_F02. (552 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7R051|A7R051_VITVI Chromosome chr10 scaffold_297, whole geno... 59 1e-07 tr|Q6YPH2|Q6YPH2_ORYSJ Os02g0103900 protein OS=Oryza sativa subs... 52 2e-05 tr|A3A269|A3A269_ORYSJ Putative uncharacterized protein OS=Oryza... 52 2e-05 tr|B8AGW0|B8AGW0_ORYSI Putative uncharacterized protein OS=Oryza... 52 3e-05 tr|Q5L0G6|Q5L0G6_GEOKA Sugar ABC transporter (Permease) OS=Geoba... 35 2.6 tr|A4IMF9|A4IMF9_GEOTN Sugar ABC transporter (Permease) OS=Geoba... 35 2.6 tr|B7YET0|B7YET0_9BACI Inner-membrane translocator OS=Geobacillu... 35 2.6 tr|B4BIX5|B4BIX5_9BACI Inner-membrane translocator OS=Geobacillu... 35 2.6 tr|B1H3C0|B1H3C0_XENTR Putative uncharacterized protein LOC54960... 35 3.4 tr|B4IBE6|B4IBE6_DROSE GM15350 OS=Drosophila sechellia GN=GM1535... 34 5.9 tr|B3KX32|B3KX32_HUMAN cDNA FLJ44601 fis, clone BLADE2007799, hi... 33 7.7 tr|B3KQ21|B3KQ21_HUMAN cDNA FLJ32640 fis, clone SYNOV2001033, hi... 33 7.7 tr|Q6PFQ1|Q6PFQ1_DANRE NMDA receptor-regulated gene 1a OS=Danio ... 33 10.0 tr|A5PKE3|A5PKE3_BOVIN NARG1L protein OS=Bos taurus GN=NARG1L PE... 33 10.0 tr|Q9VQX3|Q9VQX3_DROME Lectin-24Db OS=Drosophila melanogaster GN... 33 10.0
>tr|A7R051|A7R051_VITVI Chromosome chr10 scaffold_297, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00010972001 PE=4 SV=1 Length = 645
Score = 59.3 bits (142), Expect = 1e-07 Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 6/130 (4%) Frame = +3
Query: 3 KLDLAKQLLEEFCMGQFRNCTRMWAMRIVLEI-----KSEVVAEFSLIRIADLFEQALKH 167 KLD A++L E+FC G+F +W +R+ +E+ K ++ L+ I +L L Sbjct: 425 KLDEARKLAEKFCNGKFSGAVYLWLLRVSVEMKYVTRKCPSPSKADLLSIFELLRNILTK 484
Query: 168 ISSAEAGELWALVLEYSGGQIIIYDLIVDIMLNKLA-SSEDQTSALLACSLIDWSFCNQD 344 ++ +EA LW + L++ +D +VDI L LA + L+ +++++ Sbjct: 485 VAISEAEGLWLMALKFFSNHKHFFDKLVDISLVSLAKDGGSENGFCLSSAIVNFVLQKDG 544
Query: 345 IKHTRSVYDR 374 I+ R +Y R Sbjct: 545 IQSAREMYKR 554
>tr|Q6YPH2|Q6YPH2_ORYSJ Os02g0103900 protein OS=Oryza sativa subsp. japonica GN=OJA1212_C06.1 PE=2 SV=1 Length = 686
Score = 52.0 bits (123), Expect = 2e-05 Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 8/132 (6%) Frame = +3
Query: 3 KLDLAKQLLEEFCMGQFRNCTRMWAMRIVLEIKSEV----VAEFS---LIRIADLFEQAL 161 +L+ A+ L ++ C G + +W +R +E+KS ++ FS L + DLF AL Sbjct: 465 RLEEARNLAKKLCNGPLSHAADLWNLRASIEMKSLATSTGISSFSKENLSSLFDLFNVAL 524
Query: 162 KHISSAEAGELWALVLE-YSGGQIIIYDLIVDIMLNKLASSEDQTSALLACSLIDWSFCN 338 + EA ELW ++ +S ++ L+ ML+ ++ + A ++ +++ W Sbjct: 525 PKLPIPEAEELWHTAMKLFSHEKVYFEKLVKCAMLSLSSAGGNDCGASVSSAIVGWILQR 584
Query: 339 QDIKHTRSVYDR 374 IK R +Y R Sbjct: 585 DGIKQARKMYKR 596
>tr|A3A269|A3A269_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_004891 PE=4 SV=1 Length = 714
Score = 52.0 bits (123), Expect = 2e-05 Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 8/132 (6%) Frame = +3
Query: 3 KLDLAKQLLEEFCMGQFRNCTRMWAMRIVLEIKSEV----VAEFS---LIRIADLFEQAL 161 +L+ A+ L ++ C G + +W +R +E+KS ++ FS L + DLF AL Sbjct: 493 RLEEARNLAKKLCNGPLSHAADLWNLRASIEMKSLATSTGISSFSKENLSSLFDLFNVAL 552
Query: 162 KHISSAEAGELWALVLE-YSGGQIIIYDLIVDIMLNKLASSEDQTSALLACSLIDWSFCN 338 + EA ELW ++ +S ++ L+ ML+ ++ + A ++ +++ W Sbjct: 553 PKLPIPEAEELWHTAMKLFSHEKVYFEKLVKCAMLSLSSAGGNDCGASVSSAIVGWILQR 612
Query: 339 QDIKHTRSVYDR 374 IK R +Y R Sbjct: 613 DGIKQARKMYKR 624
>tr|B8AGW0|B8AGW0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05476 PE=4 SV=1 Length = 687
Score = 51.6 bits (122), Expect = 3e-05 Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 8/132 (6%) Frame = +3
Query: 3 KLDLAKQLLEEFCMGQFRNCTRMWAMRIVLEIKSEV----VAEFS---LIRIADLFEQAL 161 +L+ A+ L ++ C G + +W +R +E+KS ++ FS L + DLF AL Sbjct: 466 RLEEARNLAKKLCNGPLSHAADLWNLRASIEMKSLATSTGISSFSKENLSSLFDLFNVAL 525
Query: 162 KHISSAEAGELWALVLE-YSGGQIIIYDLIVDIMLNKLASSEDQTSALLACSLIDWSFCN 338 + EA ELW ++ +S ++ L+ ML+ ++ + A ++ +++ W Sbjct: 526 PKLPIHEAEELWHTAMKLFSHEKVYFEKLVKCAMLSLSSAGGNDCGASVSSAIVGWILQR 585
Query: 339 QDIKHTRSVYDR 374 IK R +Y R Sbjct: 586 DGIKQARKMYKR 597
>tr|Q5L0G6|Q5L0G6_GEOKA Sugar ABC transporter (Permease) OS=Geobacillus kaustophilus GN=GK1285 PE=4 SV=1 Length = 349
Score = 35.0 bits (79), Expect = 2.6 Identities = 26/101 (25%), Positives = 52/101 (51%) Frame = +3
Query: 108 VVAEFSLIRIADLFEQALKHISSAEAGELWALVLEYSGGQIIIYDLIVDIMLNKLASSED 287 V F L +I L L +++A AG LW L+ + ++++I+ IM+N +A Sbjct: 97 VGVSFDLPKIIHL---PLALLAAALAGALWGLIPGVLKAYLKVHEVIITIMMNYIAL--H 151
Query: 288 QTSALLACSLIDWSFCNQDIKHTRSVYDR*EIRDILNSLSH 410 T+A++ L D F ++ +K + S++ D ++++H Sbjct: 152 VTNAIIRSVLSDEGFKSKPVKESASLHS-----DFFDAITH 187
>tr|A4IMF9|A4IMF9_GEOTN Sugar ABC transporter (Permease) OS=Geobacillus thermodenitrificans (strain NG80-2) GN=GTNG_1139 PE=4 SV=1 Length = 348
Score = 35.0 bits (79), Expect = 2.6 Identities = 25/86 (29%), Positives = 45/86 (52%) Frame = +3
Query: 108 VVAEFSLIRIADLFEQALKHISSAEAGELWALVLEYSGGQIIIYDLIVDIMLNKLASSED 287 V F L +I L L +++A AG LW L+ + ++++I+ IM+N +A Sbjct: 96 VGVSFDLPKIIHL---PLAILAAAAAGALWGLIPGVLKAYVKVHEVIITIMMNYIAL--H 150
Query: 288 QTSALLACSLIDWSFCNQDIKHTRSV 365 T+A++ L D F ++ IK + S+ Sbjct: 151 VTNAIIRSVLSDEGFKSEPIKQSASL 176
>tr|B7YET0|B7YET0_9BACI Inner-membrane translocator OS=Geobacillus sp. Y412MC61 GN=GYMC61DRAFT_3256 PE=3 SV=1 Length = 348
Score = 35.0 bits (79), Expect = 2.6 Identities = 26/101 (25%), Positives = 52/101 (51%) Frame = +3
Query: 108 VVAEFSLIRIADLFEQALKHISSAEAGELWALVLEYSGGQIIIYDLIVDIMLNKLASSED 287 V F L +I L L +++A AG LW L+ + ++++I+ IM+N +A Sbjct: 96 VGVSFDLPKIIHL---PLALLAAALAGALWGLIPGVLKAYLKVHEVIITIMMNYIAL--H 150
Query: 288 QTSALLACSLIDWSFCNQDIKHTRSVYDR*EIRDILNSLSH 410 T+A++ L D F ++ +K + S++ D ++++H Sbjct: 151 VTNAIIRSVLSDEGFKSKPVKESASLHS-----DFFDAITH 186
>tr|B4BIX5|B4BIX5_9BACI Inner-membrane translocator OS=Geobacillus sp. G11MC16 GN=G11MC16DRAFT_0025 PE=3 SV=1 Length = 348
Score = 35.0 bits (79), Expect = 2.6 Identities = 25/86 (29%), Positives = 45/86 (52%) Frame = +3
Query: 108 VVAEFSLIRIADLFEQALKHISSAEAGELWALVLEYSGGQIIIYDLIVDIMLNKLASSED 287 V F L +I L L +++A AG LW L+ + ++++I+ IM+N +A Sbjct: 96 VGVSFDLPKIIHL---PLAILAAAAAGALWGLIPGVLKAYVKVHEVIITIMMNYIAL--H 150
Query: 288 QTSALLACSLIDWSFCNQDIKHTRSV 365 T+A++ L D F ++ IK + S+ Sbjct: 151 VTNAIIRSVLSDEGFKSEPIKQSASL 176
>tr|B1H3C0|B1H3C0_XENTR Putative uncharacterized protein LOC549609 OS=Xenopus tropicalis GN=LOC549609 PE=2 SV=1 Length = 597
Score = 34.7 bits (78), Expect = 3.4 Identities = 20/113 (17%), Positives = 51/113 (45%), Gaps = 1/113 (0%) Frame = +3
Query: 33 EFCMGQFRNCTRMWAMRIVLEIKSEVVAEFSLIRIADLFEQALKHISSAEAGELWALVLE 212 E+ ++ +W R+ E + + + ++FE+A KH ++ LWA+ ++ Sbjct: 393 EWATKRYSQSAALWRARL------ETLLKLCTTAVDEVFEEAFKHFKLKDSAFLWAIKVQ 446
Query: 213 YSGGQIIIYDLIVDIMLNK-LASSEDQTSALLACSLIDWSFCNQDIKHTRSVY 368 YS +I + + + + + + S + +DW++ ++ K + V+ Sbjct: 447 YS--EITKGEEATEALYKQAIVVPDSAVSTTMKEQYLDWAYRSKGYKKAKKVF 497
>tr|B4IBE6|B4IBE6_DROSE GM15350 OS=Drosophila sechellia GN=GM15350 PE=4 SV=1 Length = 719
Score = 33.9 bits (76), Expect = 5.9 Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 4/76 (5%) Frame = -3
Query: 223 PPEYSSTKAHSSPASALDICLRACSNRSAILIKENSATT----SDFISNTILMAHILVQF 56 PP SS++ +S R+ +R+A++I ++ TT + TIL+A I+V+ Sbjct: 419 PPMSSSSRISCGRSSMR----RSPRSRAAVVISPHNQTTVAVATTIAPTTILVAIIVVRI 474
Query: 55 LN*PIQNSSRSCLARS 8 N P +SSRSC R+ Sbjct: 475 ANPPPPSSSRSCTNRT 490
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