BP913113 |
Clone id |
YMU001_000026_F04 |
Library |
YMU01 |
Length |
564 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000026_F04. |
Accession |
BP913113 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1767Contig1 |
Sequence |
GAATAGCTTCTTCCAGCTGTTTAATACTGCTCGAAACATCCTGTGAAGGTAGCTCTTCTG ATCCAATCTCAAGCACAAATGTTCGTGCAAGTAACACCTTTTCAGCTGCTTGAGATGTTG GATGCGAGGGCTCACTGCAGGGGTTTTCTGTCCATACACCTAAAGGATGATCAAGAGTTT CCCTTGTCTTAACCCACAGCTGTGCACACTCGCGTGCCAGTCTGCGCATGCGTCCAAAAA AGCGTGCTCTTTCTGTTACTCCGACAGCACCCCTAGCATCTAGTATGTTGAAAGCATGAG ATGCCTTTAGGACATAATCATAAGCGGGGATAGCAAGACATTTCTCCAGTAGAGCTTTTG CTTCTGCTTCATAAAGATCAAATTCAAGCTGAACTCTGTCAACAGTTGCAGTATCTAGGT AATACTTGCTCATCTCCTTCTCATTTTCAAGGAACATCTCCCCATAGGTAATTCCAGGAG CATACTGAATTTTTCTGAAATAATTTACCCCCTGTACTGCCATCAGGATTCGTTCAAGAC CATATGTTATCTCCACAGAAATAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8L785 |
Definition |
sp|Q8L785|SYGM2_ARATH Glycyl-tRNA synthetase 2, chloroplastic/mitochondrial OS=Arabidopsis thaliana |
Align length |
190 |
Score (bit) |
209.0 |
E-value |
8.0e-54 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TR89 |
Definition |
tr|A9TR89|A9TR89_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
187 |
Score (bit) |
231.0 |
E-value |
2.0e-59 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913113|Adiantum capillus-veneris mRNA, clone: YMU001_000026_F04. (564 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TR89|A9TR89_PHYPA Predicted protein OS=Physcomitrella paten... 231 2e-59 tr|Q5VRH2|Q5VRH2_ORYSJ Os06g0103600 protein OS=Oryza sativa subs... 221 3e-56 tr|B8B198|B8B198_ORYSI Putative uncharacterized protein OS=Oryza... 221 3e-56 tr|A3B7J3|A3B7J3_ORYSJ Putative uncharacterized protein OS=Oryza... 221 3e-56 tr|A8IB17|A8IB17_CHLRE Predicted protein OS=Chlamydomonas reinha... 180 4e-44 tr|Q01DM7|Q01DM7_OSTTA Putative aminoacyl-t-RNA synthetase (ISS)... 172 1e-41 tr|Q2JDI9|Q2JDI9_FRASC Glycine--tRNA ligase OS=Frankia sp. (stra... 171 2e-41 tr|Q0RP65|Q0RP65_FRAAA Glycyl-tRNA synthetase (GlyRS) OS=Frankia... 166 8e-40 tr|A4RTK9|A4RTK9_OSTLU Predicted protein OS=Ostreococcus lucimar... 164 3e-39 tr|A8KYX1|A8KYX1_FRASN Glycyl-tRNA synthetase, beta subunit OS=F... 153 7e-36 tr|A8M6Q1|A8M6Q1_SALAI Glycyl-tRNA synthetase, beta subunit OS=S... 149 1e-34 tr|Q83I31|Q83I31_TROW8 Glycyl-tRNA synthetase OS=Tropheryma whip... 135 2e-30 tr|Q83G33|Q83G33_TROWT Glycyl-tRNA synthetase alpha chain and be... 135 2e-30 tr|Q6MDD2|Q6MDD2_PARUW Probable glycyl-tRNA synthetase OS=Protoc... 132 1e-29 tr|Q5L560|Q5L560_CHLAB Glycyl-tRNA synthetase alpha chain OS=Chl... 127 5e-28 tr|Q255S5|Q255S5_CHLFF Glycyl tRNA synthetase OS=Chlamydophila f... 124 3e-27 tr|B0BAQ2|B0BAQ2_CHLTB Glycyl-tRNA synthetase OS=Chlamydia trach... 124 3e-27 tr|B0B923|B0B923_CHLT2 Glycyl-tRNA synthetase OS=Chlamydia trach... 124 3e-27 tr|Q3KKP5|Q3KKP5_CHLTA Glycyl-tRNA synthetase OS=Chlamydia trach... 123 6e-27 tr|B5YES5|B5YES5_DICT6 Glycyl-tRNA synthetase, alpha subunit OS=... 123 6e-27 tr|B7KHU5|B7KHU5_9CHRO Glycyl-tRNA synthetase, alpha subunit OS=... 123 6e-27 tr|B4B4R6|B4B4R6_9CHRO Glycyl-tRNA synthetase, alpha subunit OS=... 123 6e-27 tr|B2V9P8|B2V9P8_SULSY Glycyl-tRNA synthetase, alpha subunit OS=... 123 8e-27 tr|Q821W2|Q821W2_CHLCV Glycyl-tRNA synthetase, tetrameric type, ... 122 1e-26 tr|B8FUJ1|B8FUJ1_DESHD Glycyl-tRNA synthetase, alpha subunit OS=... 122 1e-26 tr|B8E0E9|B8E0E9_9BACT Glycyl-tRNA synthetase, alpha subunit OS=... 122 2e-26 tr|A1HPC2|A1HPC2_9FIRM Glycine--tRNA ligase OS=Thermosinus carbo... 122 2e-26 tr|B7K0B0|B7K0B0_SYNP8 Glycyl-tRNA synthetase, alpha subunit OS=... 120 5e-26 tr|B4C135|B4C135_9CHRO Glycyl-tRNA synthetase, alpha subunit OS=... 120 5e-26 tr|B1Y7P3|B1Y7P3_LEPCP Glycyl-tRNA synthetase, alpha subunit OS=... 118 3e-25
>tr|A9TR89|A9TR89_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_171503 PE=4 SV=1 Length = 1124
Score = 231 bits (590), Expect = 2e-59 Identities = 119/187 (63%), Positives = 143/187 (76%) Frame = -3
Query: 562 ISVEITYGLERILMAVQGVNYFRKIQYAPGITYGEMFLENEKEMSKYYLDTATVDRVQLE 383 +SVEITYGLERILM++QGV++F+KIQYAPGITYGE+FLENEKEMS Y L+ A V R+Q Sbjct: 282 VSVEITYGLERILMSLQGVDHFKKIQYAPGITYGELFLENEKEMSAYNLEHADVGRMQQL 341
Query: 382 FDXXXXXXXXXXXXXXAIPAYDYVLKASHAFNILDARGAVGVTERARFFGRMRRLARECA 203 FD IPAYD+VLK SHAFNILDARGA+GVTERAR+FGRMR LAR+CA Sbjct: 342 FDLYDAEARYLLSQGLPIPAYDHVLKTSHAFNILDARGAIGVTERARYFGRMRTLARQCA 401
Query: 202 QLWVKTRETLDHPLGVWTENPCSEPSHPTSQAAEKVLLARTFVLEIGSEELPSQDVSSSI 23 Q W ++RE L +PLGVW E CSE +A ++ ++RTFVLEIGSEELP QDVSS+I Sbjct: 402 QKWAESREKLGYPLGVWEEFRCSE---IIPEATSQIDVSRTFVLEIGSEELPPQDVSSAI 458
Query: 22 KQLEEAI 2 QL+ + Sbjct: 459 SQLKGVV 465
>tr|Q5VRH2|Q5VRH2_ORYSJ Os06g0103600 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0075G19.30-1 PE=4 SV=1 Length = 1068
Score = 221 bits (562), Expect = 3e-56 Identities = 114/189 (60%), Positives = 140/189 (74%), Gaps = 2/189 (1%) Frame = -3
Query: 562 ISVEITYGLERILMAVQGVNYFRKIQYAPGITYGEMFLENEKEMSKYYLDTATVDRVQLE 383 +SVEITYGLERILM++QGV++F+ IQY GITYGE+FLENEKEMS YYL+ A VD +Q Sbjct: 224 VSVEITYGLERILMSLQGVDHFKNIQYTKGITYGELFLENEKEMSAYYLEHANVDNIQKH 283
Query: 382 FDXXXXXXXXXXXXXXAIPAYDYVLKASHAFNILDARGAVGVTERARFFGRMRRLARECA 203 FD IPAYD+VLKASHAFNILD+RG VGVTERAR+FGRMR LAR+CA Sbjct: 284 FDDFEEEARSLLSLWLPIPAYDHVLKASHAFNILDSRGFVGVTERARYFGRMRSLARQCA 343
Query: 202 QLWVKTRETLDHPLGVWTENPCSEPSHPTSQAAEKVLLA--RTFVLEIGSEELPSQDVSS 29 QLWVKTRE L +PLG + E+ P H + + + K ++ R FVLEIG+EELP DV Sbjct: 344 QLWVKTRENLGYPLGTYQESNLIYP-HVSEKPSRKGVVGQPRAFVLEIGTEELPPHDVIE 402
Query: 28 SIKQLEEAI 2 + KQLE+++ Sbjct: 403 ATKQLEKSL 411
>tr|B8B198|B8B198_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21278 PE=4 SV=1 Length = 1068
Score = 221 bits (562), Expect = 3e-56 Identities = 114/189 (60%), Positives = 140/189 (74%), Gaps = 2/189 (1%) Frame = -3
Query: 562 ISVEITYGLERILMAVQGVNYFRKIQYAPGITYGEMFLENEKEMSKYYLDTATVDRVQLE 383 +SVEITYGLERILM++QGV++F+ IQY GITYGE+FLENEKEMS YYL+ A VD +Q Sbjct: 224 VSVEITYGLERILMSLQGVDHFKNIQYTKGITYGELFLENEKEMSAYYLEHANVDNIQKH 283
Query: 382 FDXXXXXXXXXXXXXXAIPAYDYVLKASHAFNILDARGAVGVTERARFFGRMRRLARECA 203 FD IPAYD+VLKASHAFNILD+RG VGVTERAR+FGRMR LAR+CA Sbjct: 284 FDDFEEEARSLLSLWLPIPAYDHVLKASHAFNILDSRGFVGVTERARYFGRMRSLARQCA 343
Query: 202 QLWVKTRETLDHPLGVWTENPCSEPSHPTSQAAEKVLLA--RTFVLEIGSEELPSQDVSS 29 QLWVKTRE L +PLG + E+ P H + + + K ++ R FVLEIG+EELP DV Sbjct: 344 QLWVKTRENLGYPLGTYQESNLIYP-HVSEKPSRKGVVGQPRAFVLEIGTEELPPHDVIE 402
Query: 28 SIKQLEEAI 2 + KQLE+++ Sbjct: 403 ATKQLEKSL 411
>tr|A3B7J3|A3B7J3_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_019015 PE=4 SV=1 Length = 1122
Score = 221 bits (562), Expect = 3e-56 Identities = 114/189 (60%), Positives = 140/189 (74%), Gaps = 2/189 (1%) Frame = -3
Query: 562 ISVEITYGLERILMAVQGVNYFRKIQYAPGITYGEMFLENEKEMSKYYLDTATVDRVQLE 383 +SVEITYGLERILM++QGV++F+ IQY GITYGE+FLENEKEMS YYL+ A VD +Q Sbjct: 269 VSVEITYGLERILMSLQGVDHFKNIQYTKGITYGELFLENEKEMSAYYLEHANVDNIQKH 328
Query: 382 FDXXXXXXXXXXXXXXAIPAYDYVLKASHAFNILDARGAVGVTERARFFGRMRRLARECA 203 FD IPAYD+VLKASHAFNILD+RG VGVTERAR+FGRMR LAR+CA Sbjct: 329 FDDFEEEARSLLSLWLPIPAYDHVLKASHAFNILDSRGFVGVTERARYFGRMRSLARQCA 388
Query: 202 QLWVKTRETLDHPLGVWTENPCSEPSHPTSQAAEKVLLA--RTFVLEIGSEELPSQDVSS 29 QLWVKTRE L +PLG + E+ P H + + + K ++ R FVLEIG+EELP DV Sbjct: 389 QLWVKTRENLGYPLGTYQESNLIYP-HVSEKPSRKGVVGQPRAFVLEIGTEELPPHDVIE 447
Query: 28 SIKQLEEAI 2 + KQLE+++ Sbjct: 448 ATKQLEKSL 456
>tr|A8IB17|A8IB17_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_126079 PE=4 SV=1 Length = 1097
Score = 180 bits (457), Expect = 4e-44 Identities = 99/187 (52%), Positives = 119/187 (63%), Gaps = 1/187 (0%) Frame = -3
Query: 559 SVEITYGLERILMAVQGVNYFRKIQYAPG-ITYGEMFLENEKEMSKYYLDTATVDRVQLE 383 +VEITYGLERILMA+QGV F+ I+YAPG +TYGEMF +NE EMS Y LD A V + Sbjct: 247 AVEITYGLERILMALQGVTNFKDIRYAPGGVTYGEMFYQNEYEMSCYNLDEADVAGQRAR 306
Query: 382 FDXXXXXXXXXXXXXXAIPAYDYVLKASHAFNILDARGAVGVTERARFFGRMRRLARECA 203 FD IPAYD++LK SH FN++DARGAVGVTERA F +R LARE Sbjct: 307 FDLYDKEARRLLAKRLPIPAYDHLLKLSHTFNLMDARGAVGVTERAECFAVLRGLAREIT 366
Query: 202 QLWVKTRETLDHPLGVWTENPCSEPSHPTSQAAEKVLLARTFVLEIGSEELPSQDVSSSI 23 LWV RE L+HPLG+ P P A+ + RTFVLE+G EELP DV S++ Sbjct: 367 GLWVSRREELEHPLGLIPPPAVPSPQRPAPPASAE---PRTFVLEVGGEELPPDDVVSAV 423
Query: 22 KQLEEAI 2 QL E + Sbjct: 424 HQLRERV 430
>tr|Q01DM7|Q01DM7_OSTTA Putative aminoacyl-t-RNA synthetase (ISS) (Fragment) OS=Ostreococcus tauri GN=Ot02g07010 PE=4 SV=1 Length = 950
Score = 172 bits (436), Expect = 1e-41 Identities = 92/187 (49%), Positives = 124/187 (66%) Frame = -3
Query: 562 ISVEITYGLERILMAVQGVNYFRKIQYAPGITYGEMFLENEKEMSKYYLDTATVDRVQLE 383 ++VEITYGLERILMA+QGV++F+ I Y +TYGEM ++ E EMS + LD A+V+ + Sbjct: 107 VAVEITYGLERILMALQGVDHFKDIAYNDAMTYGEMRMQEEYEMSVFNLDAASVETHRRR 166
Query: 382 FDXXXXXXXXXXXXXXAIPAYDYVLKASHAFNILDARGAVGVTERARFFGRMRRLARECA 203 F+ +PA+D +LKASHAFN+LDARGAVGVTER + F MRRLARE A Sbjct: 167 FELADAEATRMLDARLPLPAFDNLLKASHAFNVLDARGAVGVTERQKLFASMRRLARETA 226
Query: 202 QLWVKTRETLDHPLGVWTENPCSEPSHPTSQAAEKVLLARTFVLEIGSEELPSQDVSSSI 23 QLWV RE L +PLG+ P + T A +A ++E+G+EELP QDV+S+ Sbjct: 227 QLWVARREELGYPLGLPEATPGTSSIETTGAAP---TMAADCLIELGTEELPPQDVASAA 283
Query: 22 KQLEEAI 2 +QL +A+ Sbjct: 284 RQLFDAV 290
>tr|Q2JDI9|Q2JDI9_FRASC Glycine--tRNA ligase OS=Frankia sp. (strain CcI3) GN=Francci3_1275 PE=4 SV=1 Length = 1017
Score = 171 bits (434), Expect = 2e-41 Identities = 90/187 (48%), Positives = 122/187 (65%) Frame = -3
Query: 562 ISVEITYGLERILMAVQGVNYFRKIQYAPGITYGEMFLENEKEMSKYYLDTATVDRVQLE 383 +SVEITYG+ERILMA+QGV +F +I YAPGI+YGE+F + E EMS+YYLD A +D V+ Sbjct: 154 VSVEITYGVERILMALQGVRHFSEIAYAPGISYGEVFGQAEYEMSRYYLDDADIDTVRRL 213
Query: 382 FDXXXXXXXXXXXXXXAIPAYDYVLKASHAFNILDARGAVGVTERARFFGRMRRLARECA 203 + +PA+ YVLK SHAFNILD+RGAV TERA F +MR L+RE A Sbjct: 214 YADYAAEARRLIDARLPVPAHSYVLKCSHAFNILDSRGAVSTTERATSFAQMRGLSREVA 273
Query: 202 QLWVKTRETLDHPLGVWTENPCSEPSHPTSQAAEKVLLARTFVLEIGSEELPSQDVSSSI 23 LW RE L HPLG + P + P+ T++A E T + EIG+EELP+ +V+ ++ Sbjct: 274 TLWRDRREELGHPLGAASPPPAAVPAAVTTRAEEPA----TLLFEIGTEELPAAEVTRTV 329
Query: 22 KQLEEAI 2 + + + Sbjct: 330 EAVRAGL 336
>tr|Q0RP65|Q0RP65_FRAAA Glycyl-tRNA synthetase (GlyRS) OS=Frankia alni (strain ACN14a) GN=glyQS PE=4 SV=1 Length = 1069
Score = 166 bits (420), Expect = 8e-40 Identities = 90/177 (50%), Positives = 115/177 (64%) Frame = -3
Query: 562 ISVEITYGLERILMAVQGVNYFRKIQYAPGITYGEMFLENEKEMSKYYLDTATVDRVQLE 383 ISVEITYG+ERILMA+QGV +F ++ YAPGI+YGE+F + E EMS+YYLD A +D V+ Sbjct: 154 ISVEITYGMERILMALQGVRHFSELAYAPGISYGEVFGQAEYEMSRYYLDDADIDTVRRL 213
Query: 382 FDXXXXXXXXXXXXXXAIPAYDYVLKASHAFNILDARGAVGVTERARFFGRMRRLARECA 203 + +PA+ YVLK SHAFNILD+RGAV TERA F +MR L+RE A Sbjct: 214 YADYAAEARRLVDARLPVPAHSYVLKCSHAFNILDSRGAVSTTERATSFAQMRGLSREVA 273
Query: 202 QLWVKTRETLDHPLGVWTENPCSEPSHPTSQAAEKVLLARTFVLEIGSEELPSQDVS 32 LW RE L HPLGV + P + P T+ V T + EIG+EELP+ +V+ Sbjct: 274 ALWRDRREELGHPLGVASPPPAAVPVAMTT----AVRAPATLLFEIGTEELPAAEVT 326
>tr|A4RTK9|A4RTK9_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_29834 PE=4 SV=1 Length = 1051
Score = 164 bits (415), Expect = 3e-39 Identities = 90/186 (48%), Positives = 118/186 (63%) Frame = -3
Query: 559 SVEITYGLERILMAVQGVNYFRKIQYAPGITYGEMFLENEKEMSKYYLDTATVDRVQLEF 380 +VEITYGLERILMA+QGV++F+ I Y +TYGEM ++ E EMS + LD A+V+ + F Sbjct: 209 AVEITYGLERILMALQGVDHFKDIAYNDMMTYGEMRMQEEYEMSVFNLDQASVETHRSRF 268
Query: 379 DXXXXXXXXXXXXXXAIPAYDYVLKASHAFNILDARGAVGVTERARFFGRMRRLARECAQ 200 + +PA+D +LKASHAFN+LDARGAVGVTER + F MR+LARE AQ Sbjct: 269 ELADKEALRMLEARLPLPAFDNLLKASHAFNVLDARGAVGVTERQKLFASMRKLARETAQ 328
Query: 199 LWVKTRETLDHPLGVWTENPCSEPSHPTSQAAEKVLLARTFVLEIGSEELPSQDVSSSIK 20 LWV RE L +PLG+ P T V+E+G+EELP QDV+S+ + Sbjct: 329 LWVARREELGYPLGLSEAPPAKSLVENTGAIP---TAPADCVIELGTEELPPQDVTSTSR 385
Query: 19 QLEEAI 2 Q EA+ Sbjct: 386 QFHEAV 391
>tr|A8KYX1|A8KYX1_FRASN Glycyl-tRNA synthetase, beta subunit OS=Frankia sp. (strain EAN1pec) GN=Franean1_2121 PE=4 SV=1 Length = 1019
Score = 153 bits (386), Expect = 7e-36 Identities = 88/189 (46%), Positives = 116/189 (61%), Gaps = 2/189 (1%) Frame = -3
Query: 562 ISVEITYGLERILMAVQGVNYFRKIQYAPGITYGEMFLENEKEMSKYYLDTATVDRVQLE 383 +SVEITYG+ERILM +Q V +F +I YAPG++YGE+F + E EMS+YYLD A +D V+ Sbjct: 154 VSVEITYGIERILMVLQKVRHFTEIAYAPGVSYGEVFGQAEYEMSRYYLDEADIDTVRRM 213
Query: 382 FDXXXXXXXXXXXXXXAIPAYDYVLKASHAFNILDARGAVGVTERARFFGRMRRLARECA 203 + +PA+ YVLK SHAFNILD+RGAV TERA F +MR ++RE A Sbjct: 214 YADCAAEARRLIDARLPVPAHIYVLKCSHAFNILDSRGAVSTTERATSFAQMRGMSREVA 273
Query: 202 QLWVKTRETLDHPLGVWTENPCSEP--SHPTSQAAEKVLLARTFVLEIGSEELPSQDVSS 29 QLW R+ L PLG E P P + P AA A T + EIG+EELP+ +V+ Sbjct: 274 QLWRDRRDELGDPLG---EAPRLAPAAARPVDPAAVPAGPA-TLLFEIGTEELPAAEVTR 329
Query: 28 SIKQLEEAI 2 + A+ Sbjct: 330 QTAAVRAAL 338
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