| BP913122 |
| Clone id |
YMU001_000026_G01 |
| Library |
YMU01 |
| Length |
304 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000026_G01. |
| Accession |
BP913122 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
CL1532Contig1 |
| Sequence |
TGACATTGAACCACACATCTTGCCTCAGTTGCATGGCAAAAACATCTACACCTACAAATC
TCGCCTCTTTTGCATAACAAAAACATCTACATCCACACACTGATAAATATCATCCAGCTT
TTCTGCGTCAATCTTCTCAACTGAAAACCACTGCTTGGTCTGTTCAAAGAAGGTCTCCTC
TGCTTGCCGGTTTCTTCCATAAGCCAAAAAAAAACGTGTCGAGGCTAATGCAATGCATCG
GACAGTTGTTAAAAGTGCCGCAGTCAGAGAAGCATCATACATAATGTCCGCAACAAGAAT
CACA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q9H867 |
| Definition |
sp|Q9H867|CN138_HUMAN Uncharacterized protein C14orf138 OS=Homo sapiens |
| Align length |
85 |
| Score (bit) |
42.7 |
| E-value |
0.0006 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9T1B6 |
| Definition |
tr|A9T1B6|A9T1B6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
| Align length |
81 |
| Score (bit) |
71.6 |
| E-value |
2.0e-11 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913122|Adiantum capillus-veneris mRNA, clone:
YMU001_000026_G01.
(304 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9T1B6|A9T1B6_PHYPA Predicted protein OS=Physcomitrella paten... 72 2e-11
tr|A4SAC4|A4SAC4_OSTLU Predicted protein OS=Ostreococcus lucimar... 44 0.003
tr|Q00S13|Q00S13_OSTTA Tumor-related protein-like (ISS) OS=Ostre... 44 0.005
tr|B7ZLA3|B7ZLA3_HUMAN Chromosome 14 open reading frame 138 OS=H... 43 0.009
tr|Q5BJ69|Q5BJ69_XENTR MGC97646 protein OS=Xenopus tropicalis GN... 42 0.012
tr|Q5XGR7|Q5XGR7_XENLA LOC495158 protein (Fragment) OS=Xenopus l... 42 0.020
tr|A5AFC3|A5AFC3_VITVI Putative uncharacterized protein OS=Vitis... 42 0.020
tr|A8JBV9|A8JBV9_CHLRE Predicted protein OS=Chlamydomonas reinha... 40 0.045
tr|B2RSP0|B2RSP0_MOUSE Gene model 71, (NCBI) OS=Mus musculus GN=... 40 0.059
tr|Q9FFH2|Q9FFH2_ARATH Arabidopsis thaliana genomic DNA, chromos... 38 0.22
tr|A7PQS1|A7PQS1_VITVI Chromosome chr6 scaffold_25, whole genome... 37 0.50
tr|O86197|O86197_PECCC ExpM protein OS=Pectobacterium carotovoru... 36 1.1
tr|B7FIP1|B7FIP1_MEDTR Putative uncharacterized protein OS=Medic... 36 1.1
tr|Q4YU77|Q4YU77_PLABE Putative uncharacterized protein OS=Plasm... 36 1.1
tr|Q4XVP2|Q4XVP2_PLACH Putative uncharacterized protein OS=Plasm... 36 1.1
tr|A9S6E3|A9S6E3_PHYPA Predicted protein (Fragment) OS=Physcomit... 35 1.5
tr|B5Y562|B5Y562_PHATR Predicted protein OS=Phaeodactylum tricor... 34 3.2
tr|B8JLY8|B8JLY8_DANRE Novel protein similar to H.sapiens FAM119... 33 5.5
tr|Q4G1M2|Q4G1M2_EPTBU Variable lymphocyte receptor B OS=Eptatre... 33 7.0
tr|Q4G1L6|Q4G1L6_EPTBU Variable lymphocyte receptor B OS=Eptatre... 33 7.0
tr|Q4G1K9|Q4G1K9_EPTBU Variable lymphocyte receptor B OS=Eptatre... 33 7.0
tr|Q4G1K0|Q4G1K0_EPTST Variable lymphocyte receptor B OS=Eptatre... 33 7.0
tr|Q4G1J8|Q4G1J8_EPTST Variable lymphocyte receptor B OS=Eptatre... 33 7.0
tr|Q2YE19|Q2YE19_EPTST Variable lymphocyte receptor B OS=Eptatre... 33 7.0
tr|Q6D4R0|Q6D4R0_ERWCT Response regulator OS=Erwinia carotovora ... 33 9.1
tr|Q6AUG1|Q6AUG1_ORYSJ Os05g0564100 protein OS=Oryza sativa subs... 33 9.4
tr|A2Y7H2|A2Y7H2_ORYSI Putative uncharacterized protein OS=Oryza... 33 9.4
>tr|A9T1B6|A9T1B6_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_232165 PE=4 SV=1
Length = 320
Score = 71.6 bits (174), Expect = 2e-11
Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = -2
Query: 303 VILVADIMYDASLTAALLTTVRCIALASTRFFLAYGRNRQAEETFFE-QTKQWFSVEKID 127
V+L D+MY L+ T++ ++ TR F+AYGRNRQAEETF + K + K+
Sbjct: 232 VVLATDLMYYDDAVQPLILTLQALSGNHTRIFMAYGRNRQAEETFMKAMEKSNLFMRKLK 291
Query: 126 AEKLDDIYQCVDVDVFVMQKR 64
+LDD+YQCVDVDV+ + R
Sbjct: 292 NVELDDVYQCVDVDVYELNTR 312
>tr|A4SAC4|A4SAC4_OSTLU Predicted protein OS=Ostreococcus
lucimarinus (strain CCE9901) GN=OSTLU_28521 PE=4 SV=1
Length = 229
Score = 44.3 bits (103), Expect = 0.003
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Frame = -2
Query: 303 VILVADIMYDASLTAALLTTVRCIALASTRFFLAYGRNRQAEETFFE----QTKQWFSVE 136
+IL D++Y AL+ T++ + + A+GRNRQA F E + + F
Sbjct: 145 LILGTDLVYYDDAMPALVKTLKSFESEALVVYFAFGRNRQALPRFLECFDAEARDAFEEP 204
Query: 135 K-IDAEKLDDIYQCVDVDVFVMQKR 64
+ +++ +LD +YQC DV V ++++
Sbjct: 205 RFLESHELDALYQCTDVSVMELKRK 229
>tr|Q00S13|Q00S13_OSTTA Tumor-related protein-like (ISS)
OS=Ostreococcus tauri GN=Ot20g00020 PE=4 SV=1
Length = 273
Score = 43.5 bits (101), Expect = 0.005
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Frame = -2
Query: 303 VILVADIMYDASLTAALLTTVRCIALAS-TRFFLAYGRNRQAEETFFEQTKQ--WFSVEK 133
+++ +D++Y AL+ T++ TR AYGRNRQA ETF + ++ + S
Sbjct: 189 LVVASDVVYVEEAMPALVETLKRFCTPKHTRVVFAYGRNRQALETFLKLSRDAGFSSPRS 248
Query: 132 ID-AEKLDDIYQCVDVDVFVMQKRR 61
I + D+++ C DVD+ ++ R
Sbjct: 249 ISKTTECDELWTCTDVDLIELELER 273
>tr|B7ZLA3|B7ZLA3_HUMAN Chromosome 14 open reading frame 138 OS=Homo
sapiens GN=C14orf138 PE=2 SV=1
Length = 229
Score = 42.7 bits (99), Expect = 0.009
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Frame = -2
Query: 300 ILVADIMYDASLTAALLTTVRCIALASTRFFLAY-----GRNRQAEETFFEQTKQWFSVE 136
IL+AD +Y LL T++ I+ T Y G+N + E+ +FE + F E
Sbjct: 140 ILMADCIYYEESLEPLLKTLKDISGFETCIICCYEQRTMGKNPEIEKKYFELLQLDFDFE 199
Query: 135 KIDAEKLDDIYQCVDVDVFVMQKRR 61
KI EK D+ Y+ D+ + ++K++
Sbjct: 200 KIPLEKHDEEYRSEDIHIIYIRKKK 224
>tr|Q5BJ69|Q5BJ69_XENTR MGC97646 protein OS=Xenopus tropicalis
GN=MGC97646 PE=2 SV=1
Length = 216
Score = 42.4 bits (98), Expect = 0.012
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = -2
Query: 300 ILVADIMYDASLTAALLTTVRCIALASTRFFLAY-----GRNRQAEETFFEQTKQWFSVE 136
IL+AD +Y LL T++ + T Y G+N Q E FFE K+ F E
Sbjct: 132 ILLADCIYYEESLEPLLKTLKDLTGIDTCILCCYEQRTMGKNPQIERRFFELLKEDFKYE 191
Query: 135 KIDAEKLDDIYQCVDVDVFVMQKR 64
K+ EK D Y+ D+ + + ++
Sbjct: 192 KVPLEKHDKEYRSEDIHILEIYRK 215
>tr|Q5XGR7|Q5XGR7_XENLA LOC495158 protein (Fragment) OS=Xenopus
laevis GN=LOC495158 PE=2 SV=1
Length = 229
Score = 41.6 bits (96), Expect = 0.020
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Frame = -2
Query: 300 ILVADIMYDASLTAALLTTVRCIALASTRFFLAY-----GRNRQAEETFFEQTKQWFSVE 136
IL+AD +Y LL T+R + + T Y G+N Q E+ FFE + F E
Sbjct: 145 ILLADCIYYEESLEPLLKTLRDLTGSDTCILCCYEQRTMGKNPQIEKRFFELLAEHFKYE 204
Query: 135 KIDAEKLDDIYQCVDVDVFVMQKR 64
++ EK D Y+ D+ + + ++
Sbjct: 205 EVPLEKHDKEYRSEDIHILQIYRK 228
>tr|A5AFC3|A5AFC3_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_003667 PE=4 SV=1
Length = 199
Score = 41.6 bits (96), Expect = 0.020
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = -2
Query: 303 VILVADIMYDASLTAALLTTVRCIALASTRFFLAYG-RNRQAEETFFEQTKQWFSVEKID 127
V++ D++Y A+L+ + + + L Y R+ +A+ F+E + F++EKI
Sbjct: 119 VVIATDVVYIEESVASLVAAMEALVSDNGVVLLGYQLRSPEADRLFWELCARVFAIEKIP 178
Query: 126 AEKLDDIYQCVDVDVFVMQKR 64
E L Y + DVFV++K+
Sbjct: 179 HEDLHPEYAYEEADVFVLRKK 199
>tr|A8JBV9|A8JBV9_CHLRE Predicted protein OS=Chlamydomonas
reinhardtii GN=CHLREDRAFT_193599 PE=4 SV=1
Length = 367
Score = 40.4 bits (93), Expect = 0.045
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = -2
Query: 219 TRFFLAYGRNRQAEETFFEQTKQWFSV-EKIDAEKLDDIYQCVDVDVFVMQKRR 61
T +A+GRNR AE F+ V E++ +LD +YQC DVDVF ++ R
Sbjct: 294 TVVLMAHGRNRFAEAAFWRHAAAADLVAERVPGSELDPVYQCSDVDVFRLRLGR 347
>tr|B2RSP0|B2RSP0_MOUSE Gene model 71, (NCBI) OS=Mus musculus
GN=Gm71 PE=2 SV=1
Length = 228
Score = 40.0 bits (92), Expect = 0.059
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Frame = -2
Query: 300 ILVADIMYDASLTAALLTTVRCIALASTRFFLAY-----GRNRQAEETFFEQTKQWFSVE 136
IL+AD +Y LL T++ ++ + T Y G+N + E+ +FE + F E
Sbjct: 139 ILMADCIYYEESLEPLLKTLKDLSGSETCIICCYEQRTMGKNPEIEKKYFELLQLDFDFE 198
Query: 135 KIDAEKLDDIYQCVDVDVFVMQKRR 61
+I +K D+ Y+ D+ + ++K++
Sbjct: 199 EIPLDKHDEEYRSEDIHIVYIRKKK 223
>tr|Q9FFH2|Q9FFH2_ARATH Arabidopsis thaliana genomic DNA, chromosome
5, P1 clone:MLN1 (At5g44170) (Putative uncharacterized
protein At5g44170) OS=Arabidopsis thaliana GN=At5g44170
PE=2 SV=1
Length = 234
Score = 38.1 bits (87), Expect = 0.22
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = -2
Query: 303 VILVADIMYDASLTAALLTTVRCIALASTRFFLAYG-RNRQAEETFFEQTKQWFSVEKID 127
+++ AD++Y L+T + + L Y R+ +A++ F+E F +EK+
Sbjct: 144 LVIAADVVYIEESVGQLVTAMELLVADDGAVLLGYQIRSPEADKLFWELCDIVFKIEKVP 203
Query: 126 AEKLDDIYQCVDVDVFVMQKR 64
E L Y + DV++ +K+
Sbjct: 204 HEHLHSDYAYEETDVYIFRKK 224
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