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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913133
Clone id YMU001_000026_H01
Library
Length 483
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000026_H01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CACACACACACGCACACCCCATTTCAAGCAAATTATCTGCATGCAAACCTTGTCACCAAG
TCAAGGCCATTTATGGCTCAACGACACACATTCTTCTCTGTTTTAGCAAAGAGAGCTGTG
TATCTCATCTCACAAGCTTCAGTAGTGGAGGACTATGGCATGCCCCCGTTGCGGCCTTTG
CAGCAAACTAGACACATTGGAGGGCAACGTTGTTGATTTGTACAGTAGAAGCGCCAAATC
AATTCATTCCTTAGGACTGGCAAAAAGAGCCAAAGCCACAACAGAGGGTAGGTGTCTTCA
GGACTTTGATACAAAAGCTCAGAAGAAGCTCATGTGTTCACTTCCATCTCGATCACTCCA
GGGAGGCCTGCCCGCTGTCAGGCGCCTGCAGAAGAAGACTTCAAATAATCCGAATGCAAG
TAGAAACATTTCATTACAAAGCACGATATCCACCAACCCAAAATATCGTGAACACAGGAC
GCT
■■Homology search results ■■ -
sp_hit_id Q9RN68
Definition sp|Q9RN68|CYC9_DESDE Nine-heme cytochrome c OS=Desulfovibrio desulfuricans
Align length 54
Score (bit) 33.9
E-value 0.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913133|Adiantum capillus-veneris mRNA, clone:
YMU001_000026_H01.
         (483 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9RN68|CYC9_DESDE Nine-heme cytochrome c OS=Desulfovibrio des...    34   0.40 
sp|Q8C525|CC059_MOUSE Uncharacterized protein C3orf59 homolog OS...    32   2.0  
sp|Q8IYB1|CC059_HUMAN Uncharacterized protein C3orf59 OS=Homo sa...    30   5.7  
sp|Q9DAL9|FA24L_MOUSE Protein FAM24A-like OS=Mus musculus PE=2 SV=1    30   7.5  
sp|P50041|PYG4_THEEB Phycobilisome rod-core linker polypeptide c...    29   9.8  
sp|A0QVQ3|RS15_MYCS2 30S ribosomal protein S15 OS=Mycobacterium ...    29   9.8  

>sp|Q9RN68|CYC9_DESDE Nine-heme cytochrome c OS=Desulfovibrio
           desulfuricans PE=1 SV=1
          Length = 326

 Score = 33.9 bits (76), Expect = 0.40
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = +2

Query: 179 CSKLDTLEGNVVDLYSRSAKSIHSLGLAKRAKATTEGRCLQDFDTKAQKKLMCS 340
           CS   T+EG     Y    +++H+  +AKRAK  T   C+   + + +++  C+
Sbjct: 89  CSTCHTVEGKAEGNYITLDRAMHATNIAKRAKGNTPVSCVSCHEQQTKERRECA 142


>sp|Q8C525|CC059_MOUSE Uncharacterized protein C3orf59 homolog
           OS=Mus musculus PE=1 SV=1
          Length = 428

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 7/104 (6%)
 Frame = +2

Query: 179 CSKLDTLEGNVVDLYSRSAKSIHSLGLAKRAKATTEGRCLQDFDTKAQKK-LMCSLPSRS 355
           C+ L+ L    V L++R   S+ S        A    +       K Q++    S+PS  
Sbjct: 319 CNMLEHLSEETVMLHARKLSSVRSDPAEHLRTAIEHVKAANRLTLKLQRRGSTTSIPSPQ 378

Query: 356 LQGGLP------AVRRLQKKTSNNPNASRNISLQSTISTNPKYR 469
             GG P        ++LQ+  + NP  S ++ +     T P +R
Sbjct: 379 SDGGDPNQPDDRLAKKLQQLVTENPGKSISVFINPDDVTRPHFR 422


>sp|Q8IYB1|CC059_HUMAN Uncharacterized protein C3orf59 OS=Homo
           sapiens GN=C3orf59 PE=1 SV=3
          Length = 491

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 7/104 (6%)
 Frame = +2

Query: 179 CSKLDTLEGNVVDLYSRSAKSIHSLGLAKRAKATTEGRCLQDFDTKAQKK-LMCSLPSRS 355
           C+ L+ L    V L++R   S+ S        A    +       + Q++    S+PS  
Sbjct: 382 CNMLEHLSEETVMLHARKLSSVRSDPAEHLRTAIEHVKAANRLTLELQRRGSTTSIPSPQ 441

Query: 356 LQGGLP------AVRRLQKKTSNNPNASRNISLQSTISTNPKYR 469
             GG P        ++LQ+  + NP  S ++ +     T P +R
Sbjct: 442 SDGGDPNQPDDRLAKKLQQLVTENPGKSISVFINPDDVTRPHFR 485


>sp|Q9DAL9|FA24L_MOUSE Protein FAM24A-like OS=Mus musculus PE=2 SV=1
          Length = 119

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = +2

Query: 170 CGLCSKLDTLEGNVVDLYSRSAKSIHSLGLAKRA 271
           CG+ + +  L G V+ LYS+ +K++ S G+AK A
Sbjct: 17  CGILTAMFLLIGLVLCLYSKISKALKSPGIAKEA 50


>sp|P50041|PYG4_THEEB Phycobilisome rod-core linker polypeptide
           cpcG4 OS=Thermosynechococcus elongatus (strain BP-1)
           GN=cpcG4 PE=3 SV=1
          Length = 251

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -1

Query: 465 YFGLVDIVLCNEMFLLAFGLFEVFFCRRLTAGRP 364
           ++G VD +L +E +  AFG F V + R+   GRP
Sbjct: 138 FYGFVDALLDSEEYTNAFGDFTVPYQRKRMEGRP 171


>sp|A0QVQ3|RS15_MYCS2 30S ribosomal protein S15 OS=Mycobacterium
           smegmatis GN=rpsO PE=3 SV=1
          Length = 89

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 19/56 (33%), Positives = 25/56 (44%)
 Frame = +3

Query: 276 PQQRVGVFRTLIQKLRRSSCVHFHLDHSREACPLSGACRRRLQIIRMQVETFHYKA 443
           P+ +V +    IQ L     VH H  HSR    L    RRRL     QV+   Y++
Sbjct: 25  PEAQVALLTKRIQDLTEHLKVHKHDHHSRRGLLLLVGRRRRLLKYVAQVDVARYRS 80
tr_hit_id B8J3C4
Definition tr|B8J3C4|B8J3C4_DESDE Cytochrome c class III OS=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Align length 54
Score (bit) 33.9
E-value 4.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913133|Adiantum capillus-veneris mRNA, clone:
YMU001_000026_H01.
         (483 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8J3C4|B8J3C4_DESDE Cytochrome c class III OS=Desulfovibrio d...    34   4.1  
tr|Q84MP8|Q84MP8_ORYSJ Putative beige protein OS=Oryza sativa su...    34   4.1  
tr|Q10D20|Q10D20_ORYSJ WD-40 repeat family protein, putative, ex...    34   4.1  
tr|A3AML3|A3AML3_ORYSJ Putative uncharacterized protein OS=Oryza...    34   4.1  
tr|A7PUH7|A7PUH7_VITVI Chromosome chr7 scaffold_31, whole genome...    33   5.4  
tr|A5CA13|A5CA13_VITVI Putative uncharacterized protein OS=Vitis...    33   5.4  
tr|A8BMA4|A8BMA4_GIALA Putative uncharacterized protein OS=Giard...    33   9.1  
tr|B7P930|B7P930_IXOSC Putative uncharacterized protein (Fragmen...    33   9.2  
tr|Q59Q49|Q59Q49_CANAL Potential SRPK1-like protein kinase OS=Ca...    33   9.2  

>tr|B8J3C4|B8J3C4_DESDE Cytochrome c class III OS=Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774
           GN=Ddes_2038 PE=3 SV=1
          Length = 326

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = +2

Query: 179 CSKLDTLEGNVVDLYSRSAKSIHSLGLAKRAKATTEGRCLQDFDTKAQKKLMCS 340
           CS   T+EG     Y    +++H+  +AKRAK  T   C+   + + +++  C+
Sbjct: 89  CSTCHTVEGKAEGNYITLDRAMHATNIAKRAKGNTPVSCVSCHEQQTKERRECA 142


>tr|Q84MP8|Q84MP8_ORYSJ Putative beige protein OS=Oryza sativa subsp.
            japonica GN=OSJNBb0036F07.12 PE=4 SV=1
          Length = 3590

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
 Frame = +2

Query: 155  MACPRCGLCSKLDTLEGNVVDLYSRSAKSIHSLGLAKR-AKATTEGRCLQDFDTKAQKKL 331
            M  P   +C + D LE + VDLY    +S  ++ +AK    A T+ +C+ D D ++ K  
Sbjct: 1914 MCPPFSAVCRRHDFLE-SCVDLYFSCVRSDCAVKMAKDLTSAATDEKCMHDDDNESLKDT 1972

Query: 332  MCSLPSRSLQG----GLPAVRRLQKKTSNNPNASRN 427
              +LP    Q      + +  + QK +S+  +   N
Sbjct: 1973 FSNLPQDQEQSAKTFSIASFPQEQKSSSSGSSGMHN 2008


>tr|Q10D20|Q10D20_ORYSJ WD-40 repeat family protein, putative,
            expressed OS=Oryza sativa subsp. japonica
            GN=LOC_Os03g53280 PE=4 SV=1
          Length = 3582

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
 Frame = +2

Query: 155  MACPRCGLCSKLDTLEGNVVDLYSRSAKSIHSLGLAKR-AKATTEGRCLQDFDTKAQKKL 331
            M  P   +C + D LE + VDLY    +S  ++ +AK    A T+ +C+ D D ++ K  
Sbjct: 1906 MCPPFSAVCRRHDFLE-SCVDLYFSCVRSDCAVKMAKDLTSAATDEKCMHDDDNESLKDT 1964

Query: 332  MCSLPSRSLQG----GLPAVRRLQKKTSNNPNASRN 427
              +LP    Q      + +  + QK +S+  +   N
Sbjct: 1965 FSNLPQDQEQSAKTFSIASFPQEQKSSSSGSSGMHN 2000


>tr|A3AML3|A3AML3_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_012035 PE=4 SV=1
          Length = 3497

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
 Frame = +2

Query: 155  MACPRCGLCSKLDTLEGNVVDLYSRSAKSIHSLGLAKR-AKATTEGRCLQDFDTKAQKKL 331
            M  P   +C + D LE + VDLY    +S  ++ +AK    A T+ +C+ D D ++ K  
Sbjct: 1821 MCPPFSAVCRRHDFLE-SCVDLYFSCVRSDCAVKMAKDLTSAATDEKCMHDDDNESLKDT 1879

Query: 332  MCSLPSRSLQG----GLPAVRRLQKKTSNNPNASRN 427
              +LP    Q      + +  + QK +S+  +   N
Sbjct: 1880 FSNLPQDQEQSAKTFSIASFPQEQKSSSSGSSGMHN 1915


>tr|A7PUH7|A7PUH7_VITVI Chromosome chr7 scaffold_31, whole genome
            shotgun sequence OS=Vitis vinifera GN=GSVIVT00023805001
            PE=4 SV=1
          Length = 2589

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = +2

Query: 155  MACPRCGLCSKLDTLEGNVVDLYSRSAKSIHSLGLAKRAKATTEGRCLQDF-DTKAQKKL 331
            M  P   +C + + LE + VDLY    ++ H++ +AK     TE R   D  DT + +  
Sbjct: 1824 MCPPFSAICRRAEFLE-SCVDLYFSCVRAAHAVKMAKELSLRTEERNSNDCDDTCSSQNT 1882

Query: 332  MCSLPSRSLQGGLPAV 379
              SLP+   Q    ++
Sbjct: 1883 FSSLPNEQEQSAKTSI 1898


>tr|A5CA13|A5CA13_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_014688 PE=4 SV=1
          Length = 3508

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = +2

Query: 155  MACPRCGLCSKLDTLEGNVVDLYSRSAKSIHSLGLAKRAKATTEGRCLQDF-DTKAQKKL 331
            M  P   +C + + LE + VDLY    ++ H++ +AK     TE R   D  DT + +  
Sbjct: 1829 MCPPFSAICRRAEFLE-SCVDLYFSCVRAAHAVKMAKELSLRTEERNSNDCDDTCSSQNT 1887

Query: 332  MCSLPSRSLQGGLPAV 379
              SLP+   Q    ++
Sbjct: 1888 FSSLPNEQEQSAKTSI 1903


>tr|A8BMA4|A8BMA4_GIALA Putative uncharacterized protein OS=Giardia
            lamblia ATCC 50803 GN=GL50803_96732 PE=4 SV=1
          Length = 3417

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +1

Query: 37   LHANLVTKSRPFMAQRHTFFSVLAKRAVYLISQASVV 147
            L ANL +KS P  A RH F  VL    +Y+  Q S++
Sbjct: 2897 LSANLFSKSSPVFAYRHDFIYVLTHYLLYISPQQSIL 2933


>tr|B7P930|B7P930_IXOSC Putative uncharacterized protein (Fragment)
           OS=Ixodes scapularis GN=IscW_ISCW017330 PE=4 SV=1
          Length = 185

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 22/72 (30%), Positives = 31/72 (43%)
 Frame = +2

Query: 260 AKRAKATTEGRCLQDFDTKAQKKLMCSLPSRSLQGGLPAVRRLQKKTSNNPNASRNISLQ 439
           A  A A      +Q   + +Q K     PSR      P   +LQ+KTS    A  +  L 
Sbjct: 34  ASSAMAPQHEPSVQAMQSTSQIKPALKAPSRKASMSAPTALQLQEKTSGKGQAKFSEQLP 93

Query: 440 STISTNPKYREH 475
           +T  + PK+R H
Sbjct: 94  TT-DSQPKFRSH 104


>tr|Q59Q49|Q59Q49_CANAL Potential SRPK1-like protein kinase
           OS=Candida albicans GN=SKY2 PE=4 SV=1
          Length = 1014

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 11/105 (10%)
 Frame = +2

Query: 176 LCSKLDTLEGNVVDL---YSRSAKSIHSLGLAKRAKATTEGRCLQD--------FDTKAQ 322
           +C   + L  NV++L   Y R  +SI+S    KR ++  E  CLQ         +DTK  
Sbjct: 385 ICMVFEILGENVLNLIYRYKRLYRSINSE--IKRKESAEENICLQQQSQMKFSKWDTKNW 442

Query: 323 KKLMCSLPSRSLQGGLPAVRRLQKKTSNNPNASRNISLQSTISTN 457
           KK   S+ S  L       +      +NN + + N ++    +TN
Sbjct: 443 KKSTKSMLSLGLHNKKDTHKHDSTSNNNNNDTNNNFTINHNNNTN 487